RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 MASTLQ96GX5 879 aa8.86□□□□□ -0.99
ITGB1-201ENST00000302278 FZD9O00144 591 aa8.86□□□□□ -0.99
ITGB1-201ENST00000302278 CAPN15O75808 1086 aa8.86□□□□□ -0.99
ITGB1-201ENST00000302278 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
ITGB1-201ENST00000302278 STARD3NLO95772 234 aa8.86□□□□□ -0.99
ITGB1-201ENST00000302278 PANK3Q9H999 370 aa8.86□□□□□ -0.99
ITGB1-201ENST00000302278 VEGFBP49765 207 aa8.85□□□□□ -0.99
ITGB1-201ENST00000302278 FKBP4Q02790 459 aaKnown RBP eCLIP8.85□□□□□ -0.99
ITGB1-201ENST00000302278 DLG5Q8TDM6 1919 aa8.85□□□□□ -0.99
ITGB1-201ENST00000302278 POTEIP0CG38 1075 aa8.85□□□□□ -0.99
ITGB1-201ENST00000302278 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
ITGB1-201ENST00000302278 MTHFSDQ2M296 383 aaKnown RBP8.85□□□□□ -0.99
ITGB1-201ENST00000302278 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
ITGB1-201ENST00000302278 C21orf2O43822 256 aa8.85□□□□□ -0.99
ITGB1-201ENST00000302278 PCNTO95613 3336 aa8.84□□□□□ -0.99
ITGB1-201ENST00000302278 PSMD1Q99460 953 aa8.84□□□□□ -0.99
ITGB1-201ENST00000302278 DDNO94850 711 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-201ENST00000302278 GRIPAP1Q4V328 841 aa8.84□□□□□ -0.99
ITGB1-201ENST00000302278 PNMA8AQ86V59 439 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-201ENST00000302278 SLC39A6Q13433 755 aa8.84□□□□□ -1
ITGB1-201ENST00000302278 CCDC93Q567U6 631 aa8.84□□□□□ -1
ITGB1-201ENST00000302278 ZNF790Q6PG37 636 aa8.84□□□□□ -1
ITGB1-201ENST00000302278 MORC1Q86VD1 984 aa8.84□□□□□ -1
ITGB1-201ENST00000302278 NPR1P16066 1061 aa8.83□□□□□ -1
ITGB1-201ENST00000302278 MAP2K1Q02750 393 aaPredicted RBP8.83□□□□□ -1
ITGB1-201ENST00000302278 HHIPL1Q96JK4 782 aa8.83□□□□□ -1
ITGB1-201ENST00000302278 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
ITGB1-201ENST00000302278 ZNF541Q9H0D2 1346 aa8.83□□□□□ -1
ITGB1-201ENST00000302278 PSME4Q14997 1843 aa8.83□□□□□ -1
ITGB1-201ENST00000302278 ST5P78524 1137 aa8.83□□□□□ -1
ITGB1-201ENST00000302278 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
ITGB1-201ENST00000302278 CRY2Q49AN0 593 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 RTKN2Q8IZC4 609 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 GPC2Q8N158 579 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 CNBD1Q8NA66 436 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 AIDAQ96BJ3 306 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 ABHD8Q96I13 439 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 HACL1Q9UJ83 578 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 ZNF496Q96IT1 587 aaPredicted RBP8.82□□□□□ -1
ITGB1-201ENST00000302278 WDR33Q9C0J8 1336 aaKnown RBP8.82□□□□□ -1
ITGB1-201ENST00000302278 VPS33BQ9H267 617 aa8.82□□□□□ -1
ITGB1-201ENST00000302278 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
ITGB1-201ENST00000302278 IL17REQ8NFR9 667 aa8.81□□□□□ -1
ITGB1-201ENST00000302278 TNNT2P45379 298 aaPredicted RBP8.81□□□□□ -1
ITGB1-201ENST00000302278 EPHX2P34913 555 aa8.81□□□□□ -1
ITGB1-201ENST00000302278 FMNL2Q96PY5 1086 aa8.81□□□□□ -1
ITGB1-201ENST00000302278 SETDB2Q96T68 719 aa8.81□□□□□ -1
ITGB1-201ENST00000302278 CC2D2BQ6DHV5 1058 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 GAS2L2Q8NHY3 880 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 ZNF622Q969S3 477 aaKnown RBP eCLIP8.8□□□□□ -14e-6■■■□□ 15.4
ITGB1-201ENST00000302278 PGAP2Q9UHJ9 254 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 ZNF646O15015 1829 aaPredicted RBP8.8□□□□□ -1
ITGB1-201ENST00000302278 CANXP27824 592 aaKnown RBP8.8□□□□□ -1
ITGB1-201ENST00000302278 LBX1P52954 281 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
ITGB1-201ENST00000302278 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 HOXA10P31260 410 aaPredicted RBP8.8□□□□□ -1
ITGB1-201ENST00000302278 IARSP41252 1262 aaKnown RBP8.8□□□□□ -1
ITGB1-201ENST00000302278 DEFB115Q30KQ5 88 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 TLL2Q9Y6L7 1015 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 CDHR2Q9BYE9 1310 aa8.8□□□□□ -1
ITGB1-201ENST00000302278 RBBP6Q7Z6E9 1792 aaKnown RBP8.79□□□□□ -1
ITGB1-201ENST00000302278 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
ITGB1-201ENST00000302278 DDX21Q9NR30 783 aaKnown RBP eCLIP8.79□□□□□ -1
ITGB1-201ENST00000302278 DUOX1Q9NRD9 1551 aa8.79□□□□□ -1
ITGB1-201ENST00000302278 ZNF609O15014 1411 aa8.79□□□□□ -1
ITGB1-201ENST00000302278 CA12O43570 354 aa8.79□□□□□ -1
ITGB1-201ENST00000302278 DIAPH1O60610 1272 aaKnown RBP8.79□□□□□ -1
ITGB1-201ENST00000302278 MAP2K2P36507 400 aa8.79□□□□□ -1
ITGB1-201ENST00000302278 USP50Q70EL3 339 aaPredicted RBP8.79□□□□□ -1
ITGB1-201ENST00000302278 CNTROBQ8N137 903 aa8.79□□□□□ -1
ITGB1-201ENST00000302278 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
ITGB1-201ENST00000302278 ALDH1B1P30837 517 aa8.78□□□□□ -1
ITGB1-201ENST00000302278 ZNF652Q9Y2D9 606 aa8.78□□□□□ -1
ITGB1-201ENST00000302278 KNSTRNQ9Y448 316 aa8.78□□□□□ -1
ITGB1-201ENST00000302278 DZIP3Q86Y13 1208 aaKnown RBP8.78□□□□□ -1
ITGB1-201ENST00000302278 ECE1P42892 770 aa8.78□□□□□ -1
ITGB1-201ENST00000302278 HTATSF1O43719 755 aaKnown RBP8.77□□□□□ -1.01
ITGB1-201ENST00000302278 SCNN1DP51172 638 aa8.77□□□□□ -1.01
ITGB1-201ENST00000302278 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
ITGB1-201ENST00000302278 RTFDC1Q9BY42 306 aaPredicted RBP8.77□□□□□ -1.01
ITGB1-201ENST00000302278 ERVV-1B6SEH8 477 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 FAM161AQ3B820 660 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 BICDL1Q6ZP65 573 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 ABCC12Q96J65 1359 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 AKAP11Q9UKA4 1901 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 A1BGP04217 495 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 BRPF1P55201 1214 aaPredicted RBP8.76□□□□□ -1.01
ITGB1-201ENST00000302278 SYNE4Q8N205 404 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 HMOX1P09601 288 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 MLLT1Q03111 559 aaPredicted RBP8.76□□□□□ -1.01
ITGB1-201ENST00000302278 CST9Q5W186 159 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
ITGB1-201ENST00000302278 TPTE2Q6XPS3 522 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 CRAMP1Q96RY5 1269 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 ZNF277Q9NRM2 450 aaPredicted RBP8.75□□□□□ -1.01
ITGB1-201ENST00000302278 NBPF26B4DH59 902 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 TEFQ10587 303 aa8.75□□□□□ -1.01
ITGB1-201ENST00000302278 NBPF10Q6P3W6 841 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms