RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.24
ATP1A3-201ENST00000302102 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
ATP1A3-201ENST00000302102 C16orf45Q96MC5 204 aaPredicted RBP13.52□□□□□ -0.24
ATP1A3-201ENST00000302102 SDF4Q9BRK5 362 aa13.52□□□□□ -0.24
ATP1A3-201ENST00000302102 PTPRUQ92729 1446 aa13.52□□□□□ -0.24
ATP1A3-201ENST00000302102 SYT1P21579 422 aa13.52□□□□□ -0.25
ATP1A3-201ENST00000302102 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.25
ATP1A3-201ENST00000302102 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
ATP1A3-201ENST00000302102 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
ATP1A3-201ENST00000302102 FKBP4Q02790 459 aaKnown RBP eCLIP13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 MYD88Q99836 296 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 SNRKQ9NRH2 765 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 CCAR2Q8N163 923 aaKnown RBP13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 AK9Q5TCS8 1911 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 KRT85P78386 507 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 ERCC4Q92889 916 aaPredicted RBP13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 FAM227BQ96M60 508 aa13.51□□□□□ -0.25
ATP1A3-201ENST00000302102 NPHP4O75161 1426 aaPredicted RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 CEP170BQ9Y4F5 1589 aaPredicted RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 SETBP1Q9Y6X0 1596 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 GLRX3O76003 335 aaKnown RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 USP44Q9H0E7 712 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 ZKSCAN5Q9Y2L8 839 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 TRMT1Q9NXH9 659 aaKnown RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 CCDC192P0DO97 292 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 ME1P48163 572 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 TPD52L1Q16890 204 aaPredicted RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 PLEKHO1Q53GL0 409 aaPredicted RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
ATP1A3-201ENST00000302102 PRAMEF22A3QJZ6 481 aa13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 CPLX1O14810 134 aa13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 CCDC183Q5T5S1 534 aa13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
ATP1A3-201ENST00000302102 A0A087WWV3 80 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 HAND2P61296 217 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 ZDHHC9Q9Y397 364 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 BIN1O00499 593 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 CCDC129Q6ZRS4 1044 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 LUZP1Q86V48 1076 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
ATP1A3-201ENST00000302102 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 DACT1Q9NYF0 836 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 ZNF335Q9H4Z2 1342 aaPredicted RBP13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 OFD1O75665 1012 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 PTH1RQ03431 593 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 IL25Q9H293 177 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 SNX14Q9Y5W7 946 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
ATP1A3-201ENST00000302102 PSMA5P28066 241 aa13.46□□□□□ -0.25
ATP1A3-201ENST00000302102 NMIQ13287 307 aaPredicted RBP13.46□□□□□ -0.25
ATP1A3-201ENST00000302102 HOMER1Q86YM7 354 aa13.46□□□□□ -0.25
ATP1A3-201ENST00000302102 MAP3K11Q16584 847 aa13.46□□□□□ -0.26
ATP1A3-201ENST00000302102 AEBP2Q6ZN18 517 aaPredicted RBP13.46□□□□□ -0.26
ATP1A3-201ENST00000302102 HTATSF1O43719 755 aaKnown RBP13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 SMC2O95347 1197 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 BRF1Q92994 677 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 STRN4Q9NRL3 753 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 LARGE1O95461 756 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 F13A1P00488 732 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 PROSER3Q2NL68 480 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 HDAC5Q9UQL6 1122 aa13.45□□□□□ -0.26
ATP1A3-201ENST00000302102 POLR3DP05423 398 aaPredicted RBP13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 HOXC9P31274 260 aa13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 ZNF445P59923 1031 aa13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 NBPF6Q5VWK0 638 aa13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 NBPF4Q96M43 638 aa13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 PDCL3Q9H2J4 239 aa13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
ATP1A3-201ENST00000302102 GOLIM4O00461 696 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms