RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 EPB41L2O43491 1005 aaKnown RBP22.52■■□□□ 1.2
TSR1-201ENST00000301364 ALDH1L1O75891 902 aa22.52■■□□□ 1.2
TSR1-201ENST00000301364 DYNC1I1O14576 645 aa22.52■■□□□ 1.2
TSR1-201ENST00000301364 PTCD1O75127 700 aaKnown RBP22.52■■□□□ 1.2
TSR1-201ENST00000301364 TNNT1P13805 278 aa22.52■■□□□ 1.2
TSR1-201ENST00000301364 HCLS1P14317 486 aaPredicted RBP22.52■■□□□ 1.2
TSR1-201ENST00000301364 DEF6Q9H4E7 631 aa22.51■■□□□ 1.19
TSR1-201ENST00000301364 GCC2Q8IWJ2 1684 aa22.51■■□□□ 1.19
TSR1-201ENST00000301364 HS1BP3Q53T59 392 aa22.51■■□□□ 1.19
TSR1-201ENST00000301364 FOXO3O43524 673 aa22.51■■□□□ 1.19
TSR1-201ENST00000301364 ARHGAP29Q52LW3 1261 aa22.51■■□□□ 1.19
TSR1-201ENST00000301364 NAPBQ9H115 298 aa22.51■■□□□ 1.19
TSR1-201ENST00000301364 INTS4Q96HW7 963 aaKnown RBP22.51■■□□□ 1.19
TSR1-201ENST00000301364 KRT18P05783 430 aaKnown RBP22.5■■□□□ 1.19
TSR1-201ENST00000301364 AXDND1Q5T1B0 1012 aaPredicted RBP22.5■■□□□ 1.19
TSR1-201ENST00000301364 GUCY1B3Q02153 619 aa22.5■■□□□ 1.19
TSR1-201ENST00000301364 PHACTR3Q96KR7 559 aa22.5■■□□□ 1.19
TSR1-201ENST00000301364 IKQ13123 557 aaPredicted RBP22.5■■□□□ 1.19
TSR1-201ENST00000301364 NPATQ14207 1427 aa22.5■■□□□ 1.19
TSR1-201ENST00000301364 TMCO3Q6UWJ1 677 aa22.49■■□□□ 1.19
TSR1-201ENST00000301364 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
TSR1-201ENST00000301364 TOP1P11387 765 aaKnown RBP22.49■■□□□ 1.19
TSR1-201ENST00000301364 HSP90AB3PQ58FF7 597 aa22.49■■□□□ 1.19
TSR1-201ENST00000301364 GOLGA8BA8MQT2 603 aa22.49■■□□□ 1.19
TSR1-201ENST00000301364 MAP3K12Q12852 859 aa22.49■■□□□ 1.19
TSR1-201ENST00000301364 IQCEQ6IPM2 695 aa22.49■■□□□ 1.19
TSR1-201ENST00000301364 CCT2P78371 535 aaKnown RBP22.48■■□□□ 1.19
TSR1-201ENST00000301364 USP26Q9BXU7 913 aa22.48■■□□□ 1.19
TSR1-201ENST00000301364 IFNL2Q8IZJ0 200 aa22.48■■□□□ 1.19
TSR1-201ENST00000301364 PHAXQ9H814 394 aaKnown RBP22.48■■□□□ 1.19
TSR1-201ENST00000301364 CGNQ9P2M7 1197 aaKnown RBP22.48■■□□□ 1.19
TSR1-201ENST00000301364 TMOD3Q9NYL9 352 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 MAST1Q9Y2H9 1570 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 CCDC181Q5TID7 509 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 TNRQ92752 1358 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 SOS1Q07889 1333 aaPredicted RBP22.47■■□□□ 1.19
TSR1-201ENST00000301364 TTC41PQ6P2S7 1318 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 GOLIM4O00461 696 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 GIMAP6Q6P9H5 292 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 CHPF2Q9P2E5 772 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 ZKSCAN5Q9Y2L8 839 aa22.47■■□□□ 1.19
TSR1-201ENST00000301364 H0YHG0 523 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 C16orf45Q96MC5 204 aaPredicted RBP22.46■■□□□ 1.19
TSR1-201ENST00000301364 RBM8AQ9Y5S9 174 aaKnown RBP22.46■■□□□ 1.19
TSR1-201ENST00000301364 UBE3BQ7Z3V4 1068 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 SLC12A7Q9Y666 1083 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 ABCC1P33527 1531 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 RIMS2Q9UQ26 1411 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 F13A1P00488 732 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 BMP2KQ9NSY1 1161 aaPredicted RBP22.46■■□□□ 1.19
TSR1-201ENST00000301364 ABCF2Q9UG63 623 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 CNPY2Q9Y2B0 182 aa22.46■■□□□ 1.19
TSR1-201ENST00000301364 GBP3Q9H0R5 595 aa22.45■■□□□ 1.19
TSR1-201ENST00000301364 FLT4P35916 1363 aa22.45■■□□□ 1.18
TSR1-201ENST00000301364 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.18
TSR1-201ENST00000301364 RNF41Q9H4P4 317 aaPredicted RBP22.45■■□□□ 1.18
TSR1-201ENST00000301364 FAM200AQ8TCP9 573 aa22.45■■□□□ 1.18
TSR1-201ENST00000301364 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
TSR1-201ENST00000301364 PRIM1P49642 420 aaKnown RBP22.45■■□□□ 1.18
TSR1-201ENST00000301364 USP16Q9Y5T5 823 aa22.45■■□□□ 1.18
TSR1-201ENST00000301364 ANXA1P04083 346 aa22.44■■□□□ 1.18
TSR1-201ENST00000301364 ANKRD13DQ6ZTN6 518 aa22.44■■□□□ 1.18
TSR1-201ENST00000301364 CNNM3Q8NE01 707 aa22.44■■□□□ 1.18
TSR1-201ENST00000301364 CWC25Q9NXE8 425 aaPredicted RBP22.44■■□□□ 1.18
TSR1-201ENST00000301364 KSR2Q6VAB6 950 aa22.44■■□□□ 1.18
TSR1-201ENST00000301364 ORC3Q9UBD5 711 aaPredicted RBP22.44■■□□□ 1.18
TSR1-201ENST00000301364 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
TSR1-201ENST00000301364 NECAB1Q8N987 351 aa22.44■■□□□ 1.18
TSR1-201ENST00000301364 TTF1Q15361 905 aaPredicted RBP22.43■■□□□ 1.18
TSR1-201ENST00000301364 TANGO6Q9C0B7 1094 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 ZRANB1Q9UGI0 708 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 ODF2Q5BJF6 829 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 ANKRD18BA2A2Z9 1011 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 GOLGA8AA7E2F4 631 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 GRM8O00222 908 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 URI1O94763 535 aaPredicted RBP22.43■■□□□ 1.18
TSR1-201ENST00000301364 SSRP1Q08945 709 aaKnown RBP22.43■■□□□ 1.18
TSR1-201ENST00000301364 BRF1Q92994 677 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 DMRT2Q9Y5R5 561 aa22.43■■□□□ 1.18
TSR1-201ENST00000301364 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
TSR1-201ENST00000301364 PAXBP1Q9Y5B6 917 aa22.42■■□□□ 1.18
TSR1-201ENST00000301364 ANKRD24Q8TF21 1146 aa22.42■■□□□ 1.18
TSR1-201ENST00000301364 CHMLP26374 656 aa22.42■■□□□ 1.18
TSR1-201ENST00000301364 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
TSR1-201ENST00000301364 IFIT3O14879 490 aaKnown RBP22.42■■□□□ 1.18
TSR1-201ENST00000301364 KIF5CO60282 957 aa22.42■■□□□ 1.18
TSR1-201ENST00000301364 SAMD1Q6SPF0 538 aaPredicted RBP22.42■■□□□ 1.18
TSR1-201ENST00000301364 SLC5A1P13866 664 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 NOLC1Q14978 699 aaKnown RBP eCLIP22.41■■□□□ 1.189e-81■■■■■ 105.7
TSR1-201ENST00000301364 AKAP4Q5JQC9 854 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 CCDC148Q8NFR7 591 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 NCOA7Q8NI08 942 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
TSR1-201ENST00000301364 ZGPATQ8N5A5 531 aaKnown RBP22.41■■□□□ 1.18
TSR1-201ENST00000301364 MEX3CQ5U5Q3 659 aaKnown RBP22.41■■□□□ 1.18
TSR1-201ENST00000301364 GOLGA6L10A6NI86 522 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 MINDY4BA8MYZ0 360 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 ERLIN2O94905 339 aa22.41■■□□□ 1.18
TSR1-201ENST00000301364 IARSP41252 1262 aaKnown RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms