RNA–Protein interactions for RNA: ENST00000300880.11

BBC3-201, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-201ENST00000300880 BRIP1Q9BX63 1249 aa23.81■■□□□ 1.4
BBC3-201ENST00000300880 TAF1DQ9H5J8 278 aaPredicted RBP23.81■■□□□ 1.4
BBC3-201ENST00000300880 MRS2Q9HD23 443 aa23.81■■□□□ 1.4
BBC3-201ENST00000300880 TMEM88BA6NKF7 163 aa23.8■■□□□ 1.4
BBC3-201ENST00000300880 HSPA8P11142 646 aaKnown RBP23.8■■□□□ 1.4
BBC3-201ENST00000300880 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
BBC3-201ENST00000300880 PDE6BP35913 854 aa23.78■■□□□ 1.4
BBC3-201ENST00000300880 L3MBTL3Q96JM7 780 aaPredicted RBP23.78■■□□□ 1.4
BBC3-201ENST00000300880 PRPF40BQ6NWY9 871 aaKnown RBP23.76■■□□□ 1.39
BBC3-201ENST00000300880 VSIG10Q8N0Z9 540 aa23.76■■□□□ 1.39
BBC3-201ENST00000300880 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
BBC3-201ENST00000300880 TBC1D2BQ9UPU7 963 aa23.75■■□□□ 1.39
BBC3-201ENST00000300880 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
BBC3-201ENST00000300880 ZNF541Q9H0D2 1346 aa23.74■■□□□ 1.39
BBC3-201ENST00000300880 IQCA1LA6NCM1 817 aa23.74■■□□□ 1.39
BBC3-201ENST00000300880 RASSF10A6NK89 507 aa23.73■■□□□ 1.39
BBC3-201ENST00000300880 SRGNP10124 158 aa23.73■■□□□ 1.39
BBC3-201ENST00000300880 EAPPQ56P03 285 aaPredicted RBP23.73■■□□□ 1.39
BBC3-201ENST00000300880 C7orf43Q8WVR3 580 aa23.73■■□□□ 1.39
BBC3-201ENST00000300880 SIPA1L3O60292 1781 aaPredicted RBP23.72■■□□□ 1.39
BBC3-201ENST00000300880 STYK1Q6J9G0 422 aa23.72■■□□□ 1.39
BBC3-201ENST00000300880 CNKSR1Q969H4 720 aa23.72■■□□□ 1.39
BBC3-201ENST00000300880 A0A087WZG4 1122 aa23.71■■□□□ 1.39
BBC3-201ENST00000300880 DEFB115Q30KQ5 88 aa23.71■■□□□ 1.39
BBC3-201ENST00000300880 TNRC18O15417 2968 aaPredicted RBP23.7■■□□□ 1.39
BBC3-201ENST00000300880 WDR33Q9C0J8 1336 aaKnown RBP23.7■■□□□ 1.39
BBC3-201ENST00000300880 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
BBC3-201ENST00000300880 MAP1SQ66K74 1059 aaPredicted RBP23.7■■□□□ 1.38
BBC3-201ENST00000300880 THSD7BQ9C0I4 1608 aa23.7■■□□□ 1.38
BBC3-201ENST00000300880 HMOX1P09601 288 aa23.69■■□□□ 1.38
BBC3-201ENST00000300880 OLFM4Q6UX06 510 aa23.69■■□□□ 1.38
BBC3-201ENST00000300880 CLEC11AQ9Y240 323 aa23.69■■□□□ 1.38
BBC3-201ENST00000300880 MASTLQ96GX5 879 aa23.68■■□□□ 1.38
BBC3-201ENST00000300880 ZNF496Q96IT1 587 aaPredicted RBP23.68■■□□□ 1.38
BBC3-201ENST00000300880 ZNF330Q9Y3S2 320 aaPredicted RBP23.68■■□□□ 1.38
BBC3-201ENST00000300880 LTBP1Q14766 1721 aa23.68■■□□□ 1.38
BBC3-201ENST00000300880 CAMTA2O94983 1202 aa23.67■■□□□ 1.38
BBC3-201ENST00000300880 STARD3NLO95772 234 aa23.67■■□□□ 1.38
BBC3-201ENST00000300880 EPHX2P34913 555 aa23.67■■□□□ 1.38
BBC3-201ENST00000300880 CNTROBQ8N137 903 aa23.67■■□□□ 1.38
BBC3-201ENST00000300880 CNBD1Q8NA66 436 aa23.67■■□□□ 1.38
BBC3-201ENST00000300880 ZNF277Q9NRM2 450 aaPredicted RBP23.67■■□□□ 1.38
BBC3-201ENST00000300880 HACL1Q9UJ83 578 aa23.67■■□□□ 1.38
BBC3-201ENST00000300880 RGS19P49795 217 aa23.66■■□□□ 1.38
BBC3-201ENST00000300880 FMR1Q06787 632 aaKnown RBP eCLIP23.66■■□□□ 1.38
BBC3-201ENST00000300880 PNISRQ8TF01 805 aaKnown RBP23.66■■□□□ 1.38
BBC3-201ENST00000300880 YTHDC1Q96MU7 727 aaKnown RBP23.66■■□□□ 1.38
BBC3-201ENST00000300880 TRPM7Q96QT4 1865 aa23.66■■□□□ 1.38
BBC3-201ENST00000300880 RNF123Q5XPI4 1314 aa23.66■■□□□ 1.38
BBC3-201ENST00000300880 CCDC85CA6NKD9 419 aa23.65■■□□□ 1.38
BBC3-201ENST00000300880 A1BGP04217 495 aa23.65■■□□□ 1.38
BBC3-201ENST00000300880 SOGA3Q5TF21 947 aa23.65■■□□□ 1.38
BBC3-201ENST00000300880 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
BBC3-201ENST00000300880 SETDB2Q96T68 719 aa23.65■■□□□ 1.38
BBC3-201ENST00000300880 HEG1Q9ULI3 1381 aa23.65■■□□□ 1.38
BBC3-201ENST00000300880 MLLT1Q03111 559 aaPredicted RBP23.64■■□□□ 1.38
BBC3-201ENST00000300880 CASP8AP2Q9UKL3 1982 aa23.64■■□□□ 1.37
BBC3-201ENST00000300880 IL6STP40189 918 aaPredicted RBP23.63■■□□□ 1.37
BBC3-201ENST00000300880 MAP2K1Q02750 393 aaPredicted RBP23.63■■□□□ 1.37
BBC3-201ENST00000300880 FKBP4Q02790 459 aaKnown RBP eCLIP23.63■■□□□ 1.37
BBC3-201ENST00000300880 CCDC93Q567U6 631 aa23.63■■□□□ 1.37
BBC3-201ENST00000300880 ST5P78524 1137 aa23.62■■□□□ 1.37
BBC3-201ENST00000300880 COL4A5P29400 1685 aa23.62■■□□□ 1.37
BBC3-201ENST00000300880 TTC5Q8N0Z6 440 aa23.61■■□□□ 1.37
BBC3-201ENST00000300880 ABT1Q9ULW3 272 aaKnown RBP23.61■■□□□ 1.37
BBC3-201ENST00000300880 ZNF790Q6PG37 636 aa23.6■■□□□ 1.37
BBC3-201ENST00000300880 FZD9O00144 591 aa23.59■■□□□ 1.37
BBC3-201ENST00000300880 NPHP1O15259 732 aa23.59■■□□□ 1.37
BBC3-201ENST00000300880 PIP4K2AP48426 406 aaPredicted RBP23.59■■□□□ 1.37
BBC3-201ENST00000300880 IL17REQ8NFR9 667 aa23.59■■□□□ 1.37
BBC3-201ENST00000300880 DDX21Q9NR30 783 aaKnown RBP eCLIP23.59■■□□□ 1.376e-8■□□□□ 8.3
BBC3-201ENST00000300880 PCDH10Q9P2E7 1040 aa23.59■■□□□ 1.37
BBC3-201ENST00000300880 TSKSQ9UJT2 592 aa23.59■■□□□ 1.37
BBC3-201ENST00000300880 PNMA8AQ86V59 439 aaPredicted RBP23.59■■□□□ 1.37
BBC3-201ENST00000300880 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
BBC3-201ENST00000300880 SNED1Q8TER0 1413 aa23.58■■□□□ 1.37
BBC3-201ENST00000300880 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.36
BBC3-201ENST00000300880 KCNQ3O43525 872 aa23.58■■□□□ 1.36
BBC3-201ENST00000300880 NPR1P16066 1061 aa23.58■■□□□ 1.36
BBC3-201ENST00000300880 CYP4F22Q6NT55 531 aa23.58■■□□□ 1.36
BBC3-201ENST00000300880 DZIP3Q86Y13 1208 aaKnown RBP23.58■■□□□ 1.36
BBC3-201ENST00000300880 CAPNS2Q96L46 248 aa23.58■■□□□ 1.36
BBC3-201ENST00000300880 IARSP41252 1262 aaKnown RBP23.57■■□□□ 1.36
BBC3-201ENST00000300880 TEX13AQ9BXU3 409 aaPredicted RBP23.57■■□□□ 1.36
BBC3-201ENST00000300880 SYNE4Q8N205 404 aa23.56■■□□□ 1.36
BBC3-201ENST00000300880 CST9Q5W186 159 aa23.55■■□□□ 1.36
BBC3-201ENST00000300880 NBPF5PQ86XG9 351 aaPredicted RBP23.55■■□□□ 1.36
BBC3-201ENST00000300880 PDE4DIPQ5VU43 2346 aa23.54■■□□□ 1.36
BBC3-201ENST00000300880 GRM1Q13255 1194 aa23.54■■□□□ 1.36
BBC3-201ENST00000300880 GPC2Q8N158 579 aa23.54■■□□□ 1.36
BBC3-201ENST00000300880 GPR101Q96P66 508 aaPredicted RBP23.54■■□□□ 1.36
BBC3-201ENST00000300880 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
BBC3-201ENST00000300880 PRAMEF22A3QJZ6 481 aa23.53■■□□□ 1.36
BBC3-201ENST00000300880 TRAF5O00463 557 aa23.53■■□□□ 1.36
BBC3-201ENST00000300880 AOC2O75106 756 aa23.53■■□□□ 1.36
BBC3-201ENST00000300880 WDR43Q15061 677 aaKnown RBP eCLIP23.53■■□□□ 1.362e-6■■■□□ 15.7
BBC3-201ENST00000300880 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
BBC3-201ENST00000300880 PAXIP1Q6ZW49 1069 aaPredicted RBP23.52■■□□□ 1.36
BBC3-201ENST00000300880 RTKN2Q8IZC4 609 aa23.52■■□□□ 1.36
BBC3-201ENST00000300880 EPS15P42566 896 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms