RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZMYND15Q9H091 742 aa15.59■□□□□ 0.09
HIF3A-204ENST00000300862 DIAPH3Q9NSV4 1193 aa15.59■□□□□ 0.09
HIF3A-204ENST00000300862 GLRX3O76003 335 aaKnown RBP15.58■□□□□ 0.09
HIF3A-204ENST00000300862 MYL6BP14649 208 aa15.58■□□□□ 0.09
HIF3A-204ENST00000300862 PTH1RQ03431 593 aa15.58■□□□□ 0.09
HIF3A-204ENST00000300862 CCDC173Q0VFZ6 552 aa15.58■□□□□ 0.09
HIF3A-204ENST00000300862 AACSQ86V21 672 aa15.58■□□□□ 0.09
HIF3A-204ENST00000300862 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.09
HIF3A-204ENST00000300862 SIL1Q9H173 461 aa15.58■□□□□ 0.09
HIF3A-204ENST00000300862 IFIT2P09913 472 aaKnown RBP15.58■□□□□ 0.08
HIF3A-204ENST00000300862 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
HIF3A-204ENST00000300862 AK2P54819 239 aa15.58■□□□□ 0.08
HIF3A-204ENST00000300862 KAZALD1Q96I82 304 aa15.58■□□□□ 0.08
HIF3A-204ENST00000300862 PPP1R9BQ96SB3 815 aa15.58■□□□□ 0.08
HIF3A-204ENST00000300862 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
HIF3A-204ENST00000300862 MTX1Q13505 466 aa15.57■□□□□ 0.08
HIF3A-204ENST00000300862 KLHDC4Q8TBB5 520 aa15.57■□□□□ 0.08
HIF3A-204ENST00000300862 BICC1Q9H694 974 aaKnown RBP15.57■□□□□ 0.08
HIF3A-204ENST00000300862 ALDH1L1O75891 902 aa15.57■□□□□ 0.08
HIF3A-204ENST00000300862 PROSER2Q86WR7 435 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-204ENST00000300862 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-204ENST00000300862 IL17RAQ96F46 866 aa15.57■□□□□ 0.08
HIF3A-204ENST00000300862 CCDC8Q9H0W5 538 aaPredicted RBP15.57■□□□□ 0.08
HIF3A-204ENST00000300862 ECHDC1Q9NTX5 307 aa15.57■□□□□ 0.08
HIF3A-204ENST00000300862 NLRP2Q9NX02 1062 aa15.57■□□□□ 0.08
HIF3A-204ENST00000300862 GRM8O00222 908 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 GADD45BO75293 160 aaPredicted RBP15.56■□□□□ 0.08
HIF3A-204ENST00000300862 TPM2P07951 284 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 CASTP20810 708 aaKnown RBP15.56■□□□□ 0.08
HIF3A-204ENST00000300862 RUFY3Q7L099 469 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 LMO7Q8WWI1 1683 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 PDIA6Q15084 440 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 RNF214Q8ND24 703 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 TTC14Q96N46 770 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
HIF3A-204ENST00000300862 SASH1O94885 1247 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 PRPF40BQ6NWY9 871 aaKnown RBP15.55■□□□□ 0.08
HIF3A-204ENST00000300862 LINS1Q8NG48 757 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 TLR7Q9NYK1 1049 aaKnown RBP15.55■□□□□ 0.08
HIF3A-204ENST00000300862 TTC41PQ6P2S7 1318 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 HEG1Q9ULI3 1381 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 LARGE1O95461 756 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 NFATC2IPQ8NCF5 419 aa15.55■□□□□ 0.08
HIF3A-204ENST00000300862 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
HIF3A-204ENST00000300862 DDX21Q9NR30 783 aaKnown RBP eCLIP15.55■□□□□ 0.08
HIF3A-204ENST00000300862 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
HIF3A-204ENST00000300862 NPHP4O75161 1426 aaPredicted RBP15.55■□□□□ 0.08
HIF3A-204ENST00000300862 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
HIF3A-204ENST00000300862 ERBB3P21860 1342 aa15.54■□□□□ 0.08
HIF3A-204ENST00000300862 ZNF790Q6PG37 636 aa15.54■□□□□ 0.08
HIF3A-204ENST00000300862 CABLES1Q8TDN4 633 aa15.54■□□□□ 0.08
HIF3A-204ENST00000300862 FAM227BQ96M60 508 aa15.54■□□□□ 0.08
HIF3A-204ENST00000300862 COL9A3Q14050 684 aaPredicted RBP15.53■□□□□ 0.08
HIF3A-204ENST00000300862 LRSAM1Q6UWE0 723 aa15.53■□□□□ 0.08
HIF3A-204ENST00000300862 USP48Q86UV5 1035 aa15.53■□□□□ 0.08
HIF3A-204ENST00000300862 ZSCAN30Q86W11 494 aa15.53■□□□□ 0.08
HIF3A-204ENST00000300862 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
HIF3A-204ENST00000300862 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
HIF3A-204ENST00000300862 RPAP1Q9BWH6 1393 aaPredicted RBP15.53■□□□□ 0.08
HIF3A-204ENST00000300862 WDR33Q9C0J8 1336 aaKnown RBP15.53■□□□□ 0.08
HIF3A-204ENST00000300862 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
HIF3A-204ENST00000300862 BOLA2Q9H3K6 86 aa15.53■□□□□ 0.08
HIF3A-204ENST00000300862 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
HIF3A-204ENST00000300862 NCAPD2Q15021 1401 aa15.52■□□□□ 0.08
HIF3A-204ENST00000300862 EPB41L2O43491 1005 aaKnown RBP15.52■□□□□ 0.08
HIF3A-204ENST00000300862 DDX58O95786 925 aaKnown RBP15.52■□□□□ 0.08
HIF3A-204ENST00000300862 MBD3O95983 291 aa15.52■□□□□ 0.08
HIF3A-204ENST00000300862 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.08
HIF3A-204ENST00000300862 GPATCH3Q96I76 525 aa15.52■□□□□ 0.08
HIF3A-204ENST00000300862 EPHA10Q5JZY3 1008 aa15.52■□□□□ 0.07
HIF3A-204ENST00000300862 COPS6Q7L5N1 327 aa15.52■□□□□ 0.07
HIF3A-204ENST00000300862 ERC1Q8IUD2 1116 aa15.52■□□□□ 0.07
HIF3A-204ENST00000300862 KLHL34Q8N239 644 aa15.52■□□□□ 0.07
HIF3A-204ENST00000300862 RUFY2Q8WXA3 655 aa15.52■□□□□ 0.07
HIF3A-204ENST00000300862 CHRNA2Q15822 529 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 CCDC83Q8IWF9 413 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
HIF3A-204ENST00000300862 MYD88Q99836 296 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 CNPY2Q9Y2B0 182 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 SLIT3O75094 1523 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 TCHHQ07283 1943 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 SLC52A2Q9HAB3 445 aa15.51■□□□□ 0.07
HIF3A-204ENST00000300862 RGPD5Q99666 1765 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 SYT1P21579 422 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 KCNJ4P48050 445 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
HIF3A-204ENST00000300862 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 EDC3Q96F86 508 aaKnown RBP15.5■□□□□ 0.07
HIF3A-204ENST00000300862 PDRG1Q9NUG6 133 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 USP16Q9Y5T5 823 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 PHRF1Q9P1Y6 1649 aaKnown RBP15.5■□□□□ 0.07
HIF3A-204ENST00000300862 NPHP3Q7Z494 1330 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 OFD1O75665 1012 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 SMC3Q9UQE7 1217 aa15.5■□□□□ 0.07
HIF3A-204ENST00000300862 NEURL1BA8MQ27 555 aa15.49■□□□□ 0.07
HIF3A-204ENST00000300862 NECAB1Q8N987 351 aa15.49■□□□□ 0.07
HIF3A-204ENST00000300862 TCEANC2Q96MN5 208 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms