RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MBD3O95983 291 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 AK2P54819 239 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 PLEKHO1Q53GL0 409 aaPredicted RBP16.15■□□□□ 0.18
CTDP1-202ENST00000299543 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
CTDP1-202ENST00000299543 PI4K2BQ8TCG2 481 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
CTDP1-202ENST00000299543 SNX14Q9Y5W7 946 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 SGSM2O43147 1006 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 HSPA4P34932 840 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 CHMP3Q9Y3E7 222 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 CUL4AQ13619 759 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 AACSQ86V21 672 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 SMC3Q9UQE7 1217 aa16.15■□□□□ 0.18
CTDP1-202ENST00000299543 MYL6BP14649 208 aa16.14■□□□□ 0.17
CTDP1-202ENST00000299543 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
CTDP1-202ENST00000299543 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
CTDP1-202ENST00000299543 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
CTDP1-202ENST00000299543 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
CTDP1-202ENST00000299543 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
CTDP1-202ENST00000299543 ORAI2Q96SN7 254 aa16.14■□□□□ 0.17
CTDP1-202ENST00000299543 CNPY2Q9Y2B0 182 aa16.14■□□□□ 0.17
CTDP1-202ENST00000299543 DYNC1I1O14576 645 aa16.13■□□□□ 0.17
CTDP1-202ENST00000299543 PIP4K2AP48426 406 aaPredicted RBP16.13■□□□□ 0.17
CTDP1-202ENST00000299543 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
CTDP1-202ENST00000299543 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
CTDP1-202ENST00000299543 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
CTDP1-202ENST00000299543 TCEANC2Q96MN5 208 aa16.13■□□□□ 0.17
CTDP1-202ENST00000299543 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
CTDP1-202ENST00000299543 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
CTDP1-202ENST00000299543 DBF4Q9UBU7 674 aaPredicted RBP16.13■□□□□ 0.17
CTDP1-202ENST00000299543 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
CTDP1-202ENST00000299543 PTH1RQ03431 593 aa16.12■□□□□ 0.17
CTDP1-202ENST00000299543 HSP90AB4PQ58FF6 505 aa16.12■□□□□ 0.17
CTDP1-202ENST00000299543 INTS4Q96HW7 963 aaKnown RBP16.12■□□□□ 0.17
CTDP1-202ENST00000299543 TSPY26PQ9H489 355 aa16.12■□□□□ 0.17
CTDP1-202ENST00000299543 POLA2Q14181 598 aa16.12■□□□□ 0.17
CTDP1-202ENST00000299543 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
CTDP1-202ENST00000299543 GLRX3O76003 335 aaKnown RBP16.12■□□□□ 0.17
CTDP1-202ENST00000299543 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
CTDP1-202ENST00000299543 NECAB1Q8N987 351 aa16.11■□□□□ 0.17
CTDP1-202ENST00000299543 DIP2AQ14689 1571 aa16.11■□□□□ 0.17
CTDP1-202ENST00000299543 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
CTDP1-202ENST00000299543 UTP14CQ5TAP6 766 aaKnown RBP16.11■□□□□ 0.17
CTDP1-202ENST00000299543 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
CTDP1-202ENST00000299543 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
CTDP1-202ENST00000299543 LIMCH1Q9UPQ0 1083 aa16.11■□□□□ 0.17
CTDP1-202ENST00000299543 RAD50Q92878 1312 aa16.11■□□□□ 0.17
CTDP1-202ENST00000299543 ZNF500O60304 480 aaPredicted RBP16.1■□□□□ 0.17
CTDP1-202ENST00000299543 ADCK5Q3MIX3 580 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 GPATCH3Q96I76 525 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 LSG1Q9H089 658 aaKnown RBP16.1■□□□□ 0.17
CTDP1-202ENST00000299543 ZKSCAN5Q9Y2L8 839 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 LARGE1O95461 756 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 GCP02774 474 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 RUFY3Q7L099 469 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 ECHDC1Q9NTX5 307 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 RNMTO43148 476 aaKnown RBP16.1■□□□□ 0.17
CTDP1-202ENST00000299543 ANKRD24Q8TF21 1146 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
CTDP1-202ENST00000299543 SYT1P21579 422 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 BABAM1Q9NWV8 329 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 STX6O43752 255 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 FERMT3Q86UX7 667 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 FAM227BQ96M60 508 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 TERF1P54274 439 aa16.09■□□□□ 0.17
CTDP1-202ENST00000299543 NLRP2Q9NX02 1062 aa16.08■□□□□ 0.17
CTDP1-202ENST00000299543 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.17
CTDP1-202ENST00000299543 KCNH5Q8NCM2 988 aa16.08■□□□□ 0.16
CTDP1-202ENST00000299543 GIGYF1O75420 1035 aaPredicted RBP16.07■□□□□ 0.16
CTDP1-202ENST00000299543 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
CTDP1-202ENST00000299543 GJB2P29033 226 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 SUCLG2Q96I99 432 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 FSD1Q9BTV5 496 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 BICC1Q9H694 974 aaKnown RBP16.07■□□□□ 0.16
CTDP1-202ENST00000299543 RGPD1P0DJD0 1748 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 AOX1Q06278 1338 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 ZSCAN22P10073 491 aaPredicted RBP16.07■□□□□ 0.16
CTDP1-202ENST00000299543 STK3Q13188 491 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 ZNF771Q7L3S4 317 aaPredicted RBP16.07■□□□□ 0.16
CTDP1-202ENST00000299543 CYP46A1Q9Y6A2 500 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.07■□□□□ 0.16
CTDP1-202ENST00000299543 ADCY9O60503 1353 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 NDUFB9Q9Y6M9 179 aa16.07■□□□□ 0.16
CTDP1-202ENST00000299543 U2AF2P26368 475 aaKnown RBP eCLIP16.06■□□□□ 0.165e-6■□□□□ 11.3
CTDP1-202ENST00000299543 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
CTDP1-202ENST00000299543 TLR7Q9NYK1 1049 aaKnown RBP16.06■□□□□ 0.16
CTDP1-202ENST00000299543 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
CTDP1-202ENST00000299543 CSB-PGBD3P0DP91 1061 aa16.06■□□□□ 0.16
CTDP1-202ENST00000299543 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
CTDP1-202ENST00000299543 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
CTDP1-202ENST00000299543 CERS3Q8IU89 383 aa16.06■□□□□ 0.16
CTDP1-202ENST00000299543 AXIN2Q9Y2T1 843 aa16.06■□□□□ 0.16
CTDP1-202ENST00000299543 FAM173BQ6P4H8 233 aa16.06■□□□□ 0.16
CTDP1-202ENST00000299543 EAF2Q96CJ1 260 aaPredicted RBP16.06■□□□□ 0.16
CTDP1-202ENST00000299543 PHF14O94880 888 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms