RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 BICD2Q8TD16 824 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-201ENST00000299267 ATP6V1DQ9Y5K8 247 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 RTCBQ9Y3I0 505 aaKnown RBP12.17□□□□□ -0.46
GABRB3-201ENST00000299267 PDE1AP54750 535 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 HAND2P61296 217 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-201ENST00000299267 ALKQ9UM73 1620 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
GABRB3-201ENST00000299267 ERBB3P21860 1342 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 IRS4O14654 1257 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-201ENST00000299267 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-201ENST00000299267 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 PROSER3Q2NL68 480 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-201ENST00000299267 KIDINS220Q9ULH0 1771 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 TIMM10P62072 90 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 TCEANC2Q96MN5 208 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 BCORL1Q5H9F3 1711 aa12.16□□□□□ -0.46
GABRB3-201ENST00000299267 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
GABRB3-201ENST00000299267 ABCA6Q8N139 1617 aa12.15□□□□□ -0.46
GABRB3-201ENST00000299267 CROCC2H7BZ55 1655 aa12.15□□□□□ -0.46
GABRB3-201ENST00000299267 SPHKAPQ2M3C7 1700 aa12.15□□□□□ -0.46
GABRB3-201ENST00000299267 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
GABRB3-201ENST00000299267 PPRC1Q5VV67 1664 aaKnown RBP12.15□□□□□ -0.46
GABRB3-201ENST00000299267 SART3Q15020 963 aaKnown RBP12.15□□□□□ -0.46
GABRB3-201ENST00000299267 NLRP3Q96P20 1036 aa12.15□□□□□ -0.46
GABRB3-201ENST00000299267 FIBPO43427 364 aa12.15□□□□□ -0.47
GABRB3-201ENST00000299267 NUCB2P80303 420 aa12.15□□□□□ -0.47
GABRB3-201ENST00000299267 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.47
GABRB3-201ENST00000299267 SLC5A1P13866 664 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
GABRB3-201ENST00000299267 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
GABRB3-201ENST00000299267 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 NDUFB9Q9Y6M9 179 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 RAB11FIP4Q86YS3 637 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
GABRB3-201ENST00000299267 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 FERMT3Q86UX7 667 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 CTDP1Q9Y5B0 961 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 CLTCQ00610 1675 aaKnown RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 TFCP2Q12800 502 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 UTP14AQ9BVJ6 771 aaKnown RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 SEC24BO95487 1268 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 CCDC152Q4G0S7 254 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 ZSCAN25Q6NSZ9 544 aa12.13□□□□□ -0.47
GABRB3-201ENST00000299267 NSFL1CQ9UNZ2 370 aaKnown RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
GABRB3-201ENST00000299267 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-201ENST00000299267 AATKQ6ZMQ8 1374 aa12.12□□□□□ -0.47
GABRB3-201ENST00000299267 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
GABRB3-201ENST00000299267 ATP7BP35670 1465 aa12.12□□□□□ -0.47
GABRB3-201ENST00000299267 ADGRL3Q9HAR2 1447 aa12.12□□□□□ -0.47
GABRB3-201ENST00000299267 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-201ENST00000299267 ANKRD18AQ8IVF6 992 aa12.12□□□□□ -0.47
GABRB3-201ENST00000299267 SPATA31A3Q5VYP0 1347 aa12.12□□□□□ -0.47
GABRB3-201ENST00000299267 MAP3K12Q12852 859 aa12.12□□□□□ -0.47
GABRB3-201ENST00000299267 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
GABRB3-201ENST00000299267 INO80Q9ULG1 1556 aaPredicted RBP12.12□□□□□ -0.47
GABRB3-201ENST00000299267 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
GABRB3-201ENST00000299267 SUCLG2Q96I99 432 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 METTL22Q9BUU2 404 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-201ENST00000299267 NAPBQ9H115 298 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
GABRB3-201ENST00000299267 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 CCDC83Q8IWF9 413 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 DIP2BQ9P265 1576 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 TRPM1Q7Z4N2 1603 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 GLI2P10070 1586 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 PLBD2Q8NHP8 589 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
GABRB3-201ENST00000299267 PTMSP20962 102 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 USP5P45974 858 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 WDR17Q8IZU2 1322 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
GABRB3-201ENST00000299267 LARP1BQ659C4 914 aaKnown RBP12.1□□□□□ -0.47
GABRB3-201ENST00000299267 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 CYP27B1O15528 508 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
GABRB3-201ENST00000299267 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
GABRB3-201ENST00000299267 GCKRQ14397 625 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
GABRB3-201ENST00000299267 CTNNA3Q9UI47 895 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms