RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 TMEM57Q8N5G2 664 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 YEATS4O95619 227 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 MX1P20591 662 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 LMAN1P49257 510 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 PRPF4BQ13523 1007 aaKnown RBP6.41□□□□□ -1.38
CPSF2-201ENST00000298875 HOOK3Q86VS8 718 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 PSMD1Q99460 953 aa6.41□□□□□ -1.38
CPSF2-201ENST00000298875 C8orf76Q96K31 380 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC85AQ96PX6 553 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 ABCF2Q9UG63 623 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 USO1O60763 962 aaKnown RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 C6orf163Q5TEZ5 329 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 PNISRQ8TF01 805 aaKnown RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 CCDC94Q9BW85 323 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 CDK19Q9BWU1 502 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 THOC2Q8NI27 1593 aaKnown RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 GUCY1B3Q02153 619 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 SPECC1Q5M775 1068 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 SEPT14Q6ZU15 432 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 COMMD10Q9Y6G5 202 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 ANKRD30BQ9BXX2 1392 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 ZNF518AQ6AHZ1 1483 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 TMC6Q7Z403 805 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 ZNF608Q9ULD9 1512 aaPredicted RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 ZNF287Q9HBT7 754 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 FGFR1OPO95684 399 aaKnown RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 RRS1Q15050 365 aaKnown RBP6.4□□□□□ -1.38
CPSF2-201ENST00000298875 BICDL1Q6ZP65 573 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 MAGI2Q86UL8 1455 aa6.4□□□□□ -1.38
CPSF2-201ENST00000298875 TIAM1Q13009 1591 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 STX1AQ16623 288 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 ADCY5O95622 1261 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 ZBTB17Q13105 803 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 WDR63Q8IWG1 891 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 TTC16Q8NEE8 873 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 USP25Q9UHP3 1055 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 NSD3Q9BZ95 1437 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 SLC12A7Q9Y666 1083 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 IGHMBP2P38935 993 aaKnown RBP6.4□□□□□ -1.39
CPSF2-201ENST00000298875 TMEM266Q2M3C6 531 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 CFAP70Q5T0N1 1121 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 TXNDC2Q86VQ3 553 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 CNNM3Q8NE01 707 aa6.4□□□□□ -1.39
CPSF2-201ENST00000298875 RSRC1Q96IZ7 334 aaKnown RBP6.4□□□□□ -1.39
CPSF2-201ENST00000298875 EXOC6BQ9Y2D4 811 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 U3KPZ7 1027 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 NUTM2BA6NNL0 878 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 NUTM2EB1AL46 878 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 NUTM2AQ8IVF1 878 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 TSNARE1Q96NA8 513 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 HFM1A2PYH4 1435 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 URB2Q14146 1524 aaKnown RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 MYCBPQ99417 103 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 STMN4Q9H169 189 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 PHAXQ9H814 394 aaKnown RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 HSF2BPO75031 334 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 PAFAH1B1P43034 410 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 ISM2Q6H9L7 571 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 CADPS2Q86UW7 1296 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 NAA15Q9BXJ9 866 aaKnown RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 BIN1O00499 593 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 BMS1Q14692 1282 aaKnown RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 CEP135Q66GS9 1140 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 NSRP1Q9H0G5 558 aaKnown RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 RAB11FIP3O75154 756 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 ZNF622Q969S3 477 aaKnown RBP eCLIP6.39□□□□□ -1.393e-6■□□□□ 8.1
CPSF2-201ENST00000298875 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 NGLY1Q96IV0 654 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 SSFA2P28290 1259 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 GJB2P29033 226 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 METTL24Q5JXM2 366 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 CEP112Q8N8E3 955 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 PPP1R14CQ8TAE6 165 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 SCAND2PQ9GZW5 306 aaPredicted RBP6.39□□□□□ -1.39
CPSF2-201ENST00000298875 MIS18AQ9NYP9 233 aa6.39□□□□□ -1.39
CPSF2-201ENST00000298875 RTEL1-TNFRSF6BF6WH68 1400 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 C9orf84Q5VXU9 1444 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 ZNF692Q9BU19 519 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 HOMER2Q9NSB8 354 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 ANKIB1Q9P2G1 1089 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 A0A1B0GUL7 405 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 MKNK2Q9HBH9 465 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 NAPBQ9H115 298 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 PAXBP1Q9Y5B6 917 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC144CPQ8IYA2 1237 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 CEP126Q9P2H0 1117 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 HSPA4P34932 840 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 GSDMDP57764 484 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 GRIPAP1Q4V328 841 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 SPTY2D1Q68D10 685 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 MSL1Q68DK7 614 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 FSIP1Q8NA03 581 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 GNAT3A8MTJ3 354 aa6.38□□□□□ -1.39
CPSF2-201ENST00000298875 CCDC12Q8WUD4 166 aaPredicted RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 RBM27Q9P2N5 1060 aaKnown RBP6.38□□□□□ -1.39
CPSF2-201ENST00000298875 GOLGA8BA8MQT2 603 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms