RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 CSB-PGBD3P0DP91 1061 aa24.03■■□□□ 1.44
NFIL3-201ENST00000297689 PDIA6Q15084 440 aa24.03■■□□□ 1.44
NFIL3-201ENST00000297689 HYPKQ9NX55 129 aa24.03■■□□□ 1.44
NFIL3-201ENST00000297689 PHKG2P15735 406 aa24.02■■□□□ 1.44
NFIL3-201ENST00000297689 DDX21Q9NR30 783 aaKnown RBP eCLIP24.01■■□□□ 1.43
NFIL3-201ENST00000297689 PKD1L3Q7Z443 1732 aa24.01■■□□□ 1.43
NFIL3-201ENST00000297689 RAD50Q92878 1312 aa24.01■■□□□ 1.43
NFIL3-201ENST00000297689 BRD1O95696 1058 aa24■■□□□ 1.43
NFIL3-201ENST00000297689 LINS1Q8NG48 757 aa24■■□□□ 1.43
NFIL3-201ENST00000297689 KAZALD1Q96I82 304 aa24■■□□□ 1.43
NFIL3-201ENST00000297689 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24■■□□□ 1.435e-10■□□□□ 8.8
NFIL3-201ENST00000297689 ZNF445P59923 1031 aa23.99■■□□□ 1.43
NFIL3-201ENST00000297689 CNTROBQ8N137 903 aa23.99■■□□□ 1.43
NFIL3-201ENST00000297689 LSG1Q9H089 658 aaKnown RBP23.99■■□□□ 1.43
NFIL3-201ENST00000297689 SPG7Q9UQ90 795 aa23.99■■□□□ 1.43
NFIL3-201ENST00000297689 HDAC5Q9UQL6 1122 aa23.99■■□□□ 1.43
NFIL3-201ENST00000297689 GLRX3O76003 335 aaKnown RBP23.98■■□□□ 1.43
NFIL3-201ENST00000297689 CWF19L2Q2TBE0 894 aaKnown RBP23.98■■□□□ 1.43
NFIL3-201ENST00000297689 ABCA3Q99758 1704 aa23.98■■□□□ 1.43
NFIL3-201ENST00000297689 MAP4K4O95819 1239 aaPredicted RBP23.98■■□□□ 1.43
NFIL3-201ENST00000297689 SLC52A2Q9HAB3 445 aa23.98■■□□□ 1.43
NFIL3-201ENST00000297689 C9orf78Q9NZ63 289 aaPredicted RBP23.98■■□□□ 1.43
NFIL3-201ENST00000297689 NHSL1Q5SYE7 1610 aa23.97■■□□□ 1.43
NFIL3-201ENST00000297689 PLEKHG2Q9H7P9 1386 aa23.96■■□□□ 1.43
NFIL3-201ENST00000297689 C5P01031 1676 aa23.96■■□□□ 1.43
NFIL3-201ENST00000297689 CYP27B1O15528 508 aa23.96■■□□□ 1.43
NFIL3-201ENST00000297689 ZNF790Q6PG37 636 aa23.96■■□□□ 1.43
NFIL3-201ENST00000297689 IFNL2Q8IZJ0 200 aa23.96■■□□□ 1.43
NFIL3-201ENST00000297689 UPF3BQ9BZI7 483 aaKnown RBP23.96■■□□□ 1.43
NFIL3-201ENST00000297689 GRM8O00222 908 aa23.95■■□□□ 1.42
NFIL3-201ENST00000297689 SLC39A6Q13433 755 aa23.95■■□□□ 1.42
NFIL3-201ENST00000297689 ERC1Q8IUD2 1116 aa23.95■■□□□ 1.42
NFIL3-201ENST00000297689 CLASRPQ8N2M8 674 aaKnown RBP23.95■■□□□ 1.42
NFIL3-201ENST00000297689 TTC14Q96N46 770 aa23.95■■□□□ 1.42
NFIL3-201ENST00000297689 SNX14Q9Y5W7 946 aa23.95■■□□□ 1.42
NFIL3-201ENST00000297689 GPT2Q8TD30 523 aa23.95■■□□□ 1.42
NFIL3-201ENST00000297689 MRC1P22897 1456 aa23.94■■□□□ 1.42
NFIL3-201ENST00000297689 SUCLG2Q96I99 432 aa23.94■■□□□ 1.42
NFIL3-201ENST00000297689 ECHDC1Q9NTX5 307 aa23.94■■□□□ 1.42
NFIL3-201ENST00000297689 PA2G4Q9UQ80 394 aaKnown RBP23.94■■□□□ 1.42
NFIL3-201ENST00000297689 DDX58O95786 925 aaKnown RBP23.93■■□□□ 1.42
NFIL3-201ENST00000297689 IGKV5-2P06315 115 aa23.93■■□□□ 1.42
NFIL3-201ENST00000297689 NFATC2IPQ8NCF5 419 aa23.93■■□□□ 1.42
NFIL3-201ENST00000297689 PRPF40AO75400 957 aaKnown RBP23.93■■□□□ 1.42
NFIL3-201ENST00000297689 RASEFQ8IZ41 740 aa23.93■■□□□ 1.42
NFIL3-201ENST00000297689 ZSCAN23Q3MJ62 389 aa23.92■■□□□ 1.42
NFIL3-201ENST00000297689 PRDM11Q9NQV5 511 aa23.92■■□□□ 1.42
NFIL3-201ENST00000297689 SASH1O94885 1247 aa23.91■■□□□ 1.42
NFIL3-201ENST00000297689 LRP10Q7Z4F1 713 aa23.91■■□□□ 1.42
NFIL3-201ENST00000297689 KCNB2Q92953 911 aa23.91■■□□□ 1.42
NFIL3-201ENST00000297689 WDR17Q8IZU2 1322 aa23.91■■□□□ 1.42
NFIL3-201ENST00000297689 OS9Q13438 667 aaPredicted RBP23.91■■□□□ 1.42
NFIL3-201ENST00000297689 CAVIN1Q6NZI2 390 aaKnown RBP23.91■■□□□ 1.42
NFIL3-201ENST00000297689 CHAMP1Q96JM3 812 aa23.91■■□□□ 1.42
NFIL3-201ENST00000297689 BICC1Q9H694 974 aaKnown RBP23.9■■□□□ 1.42
NFIL3-201ENST00000297689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.9■■□□□ 1.42
NFIL3-201ENST00000297689 COL5A2P05997 1499 aaPredicted RBP23.9■■□□□ 1.42
NFIL3-201ENST00000297689 CWC27Q6UX04 472 aaKnown RBP23.9■■□□□ 1.42
NFIL3-201ENST00000297689 DCAF5Q96JK2 942 aa23.9■■□□□ 1.42
NFIL3-201ENST00000297689 PPP1R9BQ96SB3 815 aa23.9■■□□□ 1.42
NFIL3-201ENST00000297689 PARP4Q9UKK3 1724 aaKnown RBP23.89■■□□□ 1.42
NFIL3-201ENST00000297689 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.42
NFIL3-201ENST00000297689 LARP1Q6PKG0 1096 aaKnown RBP23.89■■□□□ 1.41
NFIL3-201ENST00000297689 CLCN1P35523 988 aa23.88■■□□□ 1.41
NFIL3-201ENST00000297689 NEURL1BA8MQ27 555 aa23.87■■□□□ 1.41
NFIL3-201ENST00000297689 EAF2Q96CJ1 260 aaPredicted RBP23.87■■□□□ 1.41
NFIL3-201ENST00000297689 SNRKQ9NRH2 765 aa23.87■■□□□ 1.41
NFIL3-201ENST00000297689 IFIT2P09913 472 aaKnown RBP23.87■■□□□ 1.41
NFIL3-201ENST00000297689 AIMP1Q12904 312 aaKnown RBP23.87■■□□□ 1.41
NFIL3-201ENST00000297689 NOL8Q76FK4 1167 aaKnown RBP23.87■■□□□ 1.41
NFIL3-201ENST00000297689 RUFY2Q8WXA3 655 aa23.87■■□□□ 1.41
NFIL3-201ENST00000297689 EVI5LQ96CN4 794 aa23.87■■□□□ 1.41
NFIL3-201ENST00000297689 ZNF496Q96IT1 587 aaPredicted RBP23.87■■□□□ 1.41
NFIL3-201ENST00000297689 NASPP49321 788 aaPredicted RBP23.86■■□□□ 1.41
NFIL3-201ENST00000297689 GPATCH3Q96I76 525 aa23.86■■□□□ 1.41
NFIL3-201ENST00000297689 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
NFIL3-201ENST00000297689 PTH1RQ03431 593 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 GCKRQ14397 625 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 KIAA1211Q6ZU35 1233 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 TOM1L2Q6ZVM7 507 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 AACSQ86V21 672 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 METTL22Q9BUU2 404 aaPredicted RBP23.85■■□□□ 1.41
NFIL3-201ENST00000297689 TMEM63CQ9P1W3 806 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 RUFY3Q7L099 469 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 RIC3Q7Z5B4 369 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 DIAPH3Q9NSV4 1193 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 GLI3P10071 1580 aa23.85■■□□□ 1.41
NFIL3-201ENST00000297689 AK2P54819 239 aa23.84■■□□□ 1.41
NFIL3-201ENST00000297689 XAGE3Q8WTP9 111 aa23.84■■□□□ 1.41
NFIL3-201ENST00000297689 TM6SF1Q9BZW5 370 aa23.84■■□□□ 1.41
NFIL3-201ENST00000297689 RPAP1Q9BWH6 1393 aaPredicted RBP23.84■■□□□ 1.41
NFIL3-201ENST00000297689 NCLP19338 710 aaKnown RBP23.83■■□□□ 1.41
NFIL3-201ENST00000297689 CCDC173Q0VFZ6 552 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 COPS6Q7L5N1 327 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 COL15A1P39059 1388 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 AHDC1Q5TGY3 1603 aaPredicted RBP23.83■■□□□ 1.41
NFIL3-201ENST00000297689 MBD3O95983 291 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 G3BP1Q13283 466 aaKnown RBP eCLIP23.83■■□□□ 1.411e-8■□□□□ 10.4
NFIL3-201ENST00000297689 NECTIN1Q15223 517 aa23.83■■□□□ 1.41
NFIL3-201ENST00000297689 FOXD4L5Q5VV16 416 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms