RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 GCOM1H8Y6P7 765 aaPredicted RBP12.73□□□□□ -0.37
PBRM1-201ENST00000296302 F13A1P00488 732 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 MYZAPP0CAP1 466 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 ESYT1Q9BSJ8 1104 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 ZNF213O14771 459 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC175P0C221 793 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 TUBB4BP68371 445 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
PBRM1-201ENST00000296302 SSRP1Q08945 709 aaKnown RBP12.73□□□□□ -0.37
PBRM1-201ENST00000296302 LRP2BPQ9P2M1 347 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 DNAI1Q9UI46 699 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 CETN2P41208 172 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 TMX1Q9H3N1 280 aa12.73□□□□□ -0.37
PBRM1-201ENST00000296302 CKAP4Q07065 602 aaKnown RBP12.72□□□□□ -0.37
PBRM1-201ENST00000296302 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
PBRM1-201ENST00000296302 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
PBRM1-201ENST00000296302 SLC12A7Q9Y666 1083 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 MNAT1P51948 309 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 PDE1AP54750 535 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 UBASH3AP57075 661 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC91Q7Z6B0 441 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 INTS4Q96HW7 963 aaKnown RBP12.72□□□□□ -0.37
PBRM1-201ENST00000296302 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 NAPBQ9H115 298 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC113Q9H0I3 377 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 DACT1Q9NYF0 836 aa12.72□□□□□ -0.37
PBRM1-201ENST00000296302 CTAGE15A4D2H0 777 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 GOLGA8AA7E2F4 631 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 CTAGE8P0CG41 777 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 CTAGE6Q86UF2 777 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 CTAGE4Q8IX94 777 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
PBRM1-201ENST00000296302 GTF2A1P52655 376 aaPredicted RBP12.71□□□□□ -0.37
PBRM1-201ENST00000296302 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 SPECC1Q5M775 1068 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 KCNG4Q8TDN1 519 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
PBRM1-201ENST00000296302 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
PBRM1-201ENST00000296302 KIF20AO95235 890 aa12.71□□□□□ -0.38
PBRM1-201ENST00000296302 TYRO3Q06418 890 aa12.71□□□□□ -0.38
PBRM1-201ENST00000296302 METTL24Q5JXM2 366 aa12.71□□□□□ -0.38
PBRM1-201ENST00000296302 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.38
PBRM1-201ENST00000296302 HLTFQ14527 1009 aaKnown RBP eCLIP12.7□□□□□ -0.384e-6■■■■□ 22.5
PBRM1-201ENST00000296302 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 IPO4Q8TEX9 1081 aaKnown RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 ZSWIM4Q9H7M6 989 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 SPECC1LQ69YQ0 1117 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 CEP112Q8N8E3 955 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 EMILIN1Q9Y6C2 1016 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 ANKRD36BQ8N2N9 1353 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 IARSP41252 1262 aaKnown RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 SYKP43405 635 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 ATP2B2Q01814 1243 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
PBRM1-201ENST00000296302 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
PBRM1-201ENST00000296302 ASXL1Q8IXJ9 1541 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 HSF2BPO75031 334 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 DNAJC25Q9H1X3 360 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 BCCIPQ9P287 314 aaKnown RBP eCLIP12.69□□□□□ -0.38
PBRM1-201ENST00000296302 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.382e-8■■□□□ 13.8
PBRM1-201ENST00000296302 IBSPP21815 317 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-201ENST00000296302 MTIF2P46199 727 aaKnown RBP12.69□□□□□ -0.38
PBRM1-201ENST00000296302 KIAA0586Q9BVV6 1533 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 RHPN1Q8TCX5 695 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 GOLGA1Q92805 767 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 TAOK3Q9H2K8 898 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 MAGI1Q96QZ7 1491 aaPredicted RBP12.69□□□□□ -0.38
PBRM1-201ENST00000296302 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 TUBBP07437 444 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
PBRM1-201ENST00000296302 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.69□□□□□ -0.38
PBRM1-201ENST00000296302 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
PBRM1-201ENST00000296302 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
PBRM1-201ENST00000296302 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 TICAM2Q86XR7 235 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 MYD88Q99836 296 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 RSPH14Q9UHP6 348 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 IFIT3O14879 490 aaKnown RBP12.68□□□□□ -0.38
PBRM1-201ENST00000296302 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
PBRM1-201ENST00000296302 MAATS1Q7Z4T9 603 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms