RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
RHO-201ENST00000296271 LINS1Q8NG48 757 aa14.35□□□□□ -0.11
RHO-201ENST00000296271 GBP4Q96PP9 640 aa14.35□□□□□ -0.11
RHO-201ENST00000296271 GOLGA6L3A6NEY3 463 aa14.35□□□□□ -0.11
RHO-201ENST00000296271 FOXD4L6Q3SYB3 417 aaPredicted RBP14.35□□□□□ -0.11
RHO-201ENST00000296271 FOXD4L3Q6VB84 417 aaPredicted RBP14.35□□□□□ -0.11
RHO-201ENST00000296271 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
RHO-201ENST00000296271 EAF2Q96CJ1 260 aaPredicted RBP14.35□□□□□ -0.11
RHO-201ENST00000296271 ALDH1L1O75891 902 aa14.34□□□□□ -0.11
RHO-201ENST00000296271 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
RHO-201ENST00000296271 AACSQ86V21 672 aa14.34□□□□□ -0.11
RHO-201ENST00000296271 NDUFB9Q9Y6M9 179 aa14.34□□□□□ -0.11
RHO-201ENST00000296271 TNS3Q68CZ2 1445 aa14.34□□□□□ -0.11
RHO-201ENST00000296271 CYP2E1P05181 493 aaPredicted RBP14.34□□□□□ -0.11
RHO-201ENST00000296271 MTX1Q13505 466 aa14.34□□□□□ -0.11
RHO-201ENST00000296271 NEURL1BA8MQ27 555 aa14.33□□□□□ -0.11
RHO-201ENST00000296271 EDC3Q96F86 508 aaKnown RBP14.33□□□□□ -0.11
RHO-201ENST00000296271 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.11
RHO-201ENST00000296271 SGSM2O43147 1006 aa14.33□□□□□ -0.12
RHO-201ENST00000296271 CHGBP05060 677 aa14.33□□□□□ -0.12
RHO-201ENST00000296271 PTH1RQ03431 593 aa14.33□□□□□ -0.12
RHO-201ENST00000296271 CRYBG1Q9Y4K1 1723 aa14.33□□□□□ -0.12
RHO-201ENST00000296271 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
RHO-201ENST00000296271 CCDC9Q9Y3X0 531 aaKnown RBP14.32□□□□□ -0.12
RHO-201ENST00000296271 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
RHO-201ENST00000296271 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
RHO-201ENST00000296271 ADAMTS7Q9UKP4 1686 aa14.32□□□□□ -0.12
RHO-201ENST00000296271 CABP4P57796 275 aa14.32□□□□□ -0.12
RHO-201ENST00000296271 GCKRQ14397 625 aa14.32□□□□□ -0.12
RHO-201ENST00000296271 TTC5Q8N0Z6 440 aa14.32□□□□□ -0.12
RHO-201ENST00000296271 LSG1Q9H089 658 aaKnown RBP14.32□□□□□ -0.12
RHO-201ENST00000296271 PRDM11Q9NQV5 511 aa14.32□□□□□ -0.12
RHO-201ENST00000296271 DDX58O95786 925 aaKnown RBP14.31□□□□□ -0.12
RHO-201ENST00000296271 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
RHO-201ENST00000296271 ANKRD13DQ6ZTN6 518 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 TOM1L2Q6ZVM7 507 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 DCAF5Q96JK2 942 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 STRN4Q9NRL3 753 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 AOX1Q06278 1338 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 UBE3BQ7Z3V4 1068 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 CNTROBQ8N137 903 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 FAM227BQ96M60 508 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 BOLA2Q9H3K6 86 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 SNX14Q9Y5W7 946 aa14.31□□□□□ -0.12
RHO-201ENST00000296271 NBPF26B4DH59 902 aa14.3□□□□□ -0.12
RHO-201ENST00000296271 SNRPA1P09661 255 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 NCLP19338 710 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 HSPA4P34932 840 aa14.3□□□□□ -0.12
RHO-201ENST00000296271 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
RHO-201ENST00000296271 NBPF10Q6P3W6 841 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 NBPF15Q8N660 670 aa14.3□□□□□ -0.12
RHO-201ENST00000296271 ECHDC1Q9NTX5 307 aa14.3□□□□□ -0.12
RHO-201ENST00000296271 NSFL1CQ9UNZ2 370 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 METTL22Q9BUU2 404 aaPredicted RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 XIRP1Q702N8 1843 aaKnown RBP14.3□□□□□ -0.12
RHO-201ENST00000296271 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
RHO-201ENST00000296271 A1BGP04217 495 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 TTLL7Q6ZT98 887 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 GLRX3O76003 335 aaKnown RBP14.29□□□□□ -0.12
RHO-201ENST00000296271 MCCP23508 829 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 G3BP1Q13283 466 aaKnown RBP eCLIP14.29□□□□□ -0.12
RHO-201ENST00000296271 ADCK5Q3MIX3 580 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 LMBRD1Q9NUN5 540 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 RBM27Q9P2N5 1060 aaKnown RBP14.29□□□□□ -0.12
RHO-201ENST00000296271 UTYO14607 1347 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 RAD50Q92878 1312 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 HSP90AB4PQ58FF6 505 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 CHMP4AQ9BY43 222 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 TAF6LQ9Y6J9 622 aa14.29□□□□□ -0.12
RHO-201ENST00000296271 LARGE1O95461 756 aa14.28□□□□□ -0.12
RHO-201ENST00000296271 NEXNQ0ZGT2 675 aa14.28□□□□□ -0.12
RHO-201ENST00000296271 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
RHO-201ENST00000296271 EIF5BO60841 1220 aaKnown RBP14.28□□□□□ -0.12
RHO-201ENST00000296271 NUCB2P80303 420 aa14.28□□□□□ -0.12
RHO-201ENST00000296271 L1TD1Q5T7N2 865 aaKnown RBP14.28□□□□□ -0.12
RHO-201ENST00000296271 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
RHO-201ENST00000296271 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
RHO-201ENST00000296271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.12
RHO-201ENST00000296271 PRPF40BQ6NWY9 871 aaKnown RBP14.27□□□□□ -0.13
RHO-201ENST00000296271 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
RHO-201ENST00000296271 CLEC17AQ6ZS10 378 aa14.27□□□□□ -0.13
RHO-201ENST00000296271 GDPD2Q9HCC8 539 aa14.27□□□□□ -0.13
RHO-201ENST00000296271 SLAIN2Q9P270 581 aa14.27□□□□□ -0.13
RHO-201ENST00000296271 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.13
RHO-201ENST00000296271 TTC41PQ6P2S7 1318 aa14.27□□□□□ -0.13
RHO-201ENST00000296271 A0A087WZG4 1122 aa14.27□□□□□ -0.13
RHO-201ENST00000296271 GPT2Q8TD30 523 aa14.27□□□□□ -0.13
RHO-201ENST00000296271 DCCP43146 1447 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 A0A0D9SFI3 127 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 AK2P54819 239 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 ANAPC15P60006 121 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 TFCP2Q12800 502 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
RHO-201ENST00000296271 SLFNL1Q499Z3 407 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 ZCRB1Q8TBF4 217 aaKnown RBP14.26□□□□□ -0.13
RHO-201ENST00000296271 ZBTB3Q9H5J0 574 aa14.26□□□□□ -0.13
RHO-201ENST00000296271 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms