RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 NFAT5O94916 1531 aa23.57■■□□□ 1.36
NKX6-1-201ENST00000295886 HOXB7P09629 217 aa23.57■■□□□ 1.36
NKX6-1-201ENST00000295886 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
NKX6-1-201ENST00000295886 GIGYF1O75420 1035 aaPredicted RBP23.56■■□□□ 1.36
NKX6-1-201ENST00000295886 GLRX3O76003 335 aaKnown RBP23.56■■□□□ 1.36
NKX6-1-201ENST00000295886 PRPF40BQ6NWY9 871 aaKnown RBP23.56■■□□□ 1.36
NKX6-1-201ENST00000295886 MPNDQ8N594 471 aa23.56■■□□□ 1.36
NKX6-1-201ENST00000295886 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
NKX6-1-201ENST00000295886 HSP90AB4PQ58FF6 505 aa23.55■■□□□ 1.36
NKX6-1-201ENST00000295886 TSPY26PQ9H489 355 aa23.55■■□□□ 1.36
NKX6-1-201ENST00000295886 TCHHQ07283 1943 aa23.55■■□□□ 1.36
NKX6-1-201ENST00000295886 GCP02774 474 aa23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 IFIT2P09913 472 aaKnown RBP23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 SYT1P21579 422 aa23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 AACSQ86V21 672 aa23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 LIMCH1Q9UPQ0 1083 aa23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 COL9A3Q14050 684 aaPredicted RBP23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 CCDC83Q8IWF9 413 aa23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 JAKMIP1Q96N16 626 aaKnown RBP23.54■■□□□ 1.36
NKX6-1-201ENST00000295886 KCNH5Q8NCM2 988 aa23.53■■□□□ 1.36
NKX6-1-201ENST00000295886 SIL1Q9H173 461 aa23.53■■□□□ 1.36
NKX6-1-201ENST00000295886 ECHDC1Q9NTX5 307 aa23.53■■□□□ 1.36
NKX6-1-201ENST00000295886 NOL7Q9UMY1 257 aaKnown RBP23.53■■□□□ 1.36
NKX6-1-201ENST00000295886 CCDC8Q9H0W5 538 aaPredicted RBP23.53■■□□□ 1.36
NKX6-1-201ENST00000295886 AXIN2Q9Y2T1 843 aa23.53■■□□□ 1.36
NKX6-1-201ENST00000295886 KSR2Q6VAB6 950 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 KLHDC4Q8TBB5 520 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 ANKRD24Q8TF21 1146 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 SUCLG2Q96I99 432 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 KDM3BQ7LBC6 1761 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 TTC41PQ6P2S7 1318 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 FIBPO43427 364 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 STX6O43752 255 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 TPM2P07951 284 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 ZSCAN22P10073 491 aaPredicted RBP23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 SMC3Q9UQE7 1217 aa23.52■■□□□ 1.36
NKX6-1-201ENST00000295886 FAM227BQ96M60 508 aa23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 TLR7Q9NYK1 1049 aaKnown RBP23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 EPB41L2O43491 1005 aaKnown RBP23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 KAZALD1Q96I82 304 aa23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 HYPKQ9NX55 129 aa23.51■■□□□ 1.35
NKX6-1-201ENST00000295886 OFD1O75665 1012 aa23.5■■□□□ 1.35
NKX6-1-201ENST00000295886 SLC39A6Q13433 755 aa23.5■■□□□ 1.35
NKX6-1-201ENST00000295886 MTX1Q13505 466 aa23.5■■□□□ 1.35
NKX6-1-201ENST00000295886 USP42Q9H9J4 1324 aaKnown RBP23.5■■□□□ 1.35
NKX6-1-201ENST00000295886 SYAP1Q96A49 352 aaPredicted RBP23.5■■□□□ 1.35
NKX6-1-201ENST00000295886 ARHGEF25Q86VW2 580 aa23.49■■□□□ 1.35
NKX6-1-201ENST00000295886 ANKLE2Q86XL3 938 aa23.49■■□□□ 1.35
NKX6-1-201ENST00000295886 NECAB1Q8N987 351 aa23.49■■□□□ 1.35
NKX6-1-201ENST00000295886 SASH1O94885 1247 aa23.49■■□□□ 1.35
NKX6-1-201ENST00000295886 EAF2Q96CJ1 260 aaPredicted RBP23.49■■□□□ 1.35
NKX6-1-201ENST00000295886 PDRG1Q9NUG6 133 aa23.49■■□□□ 1.35
NKX6-1-201ENST00000295886 GJB2P29033 226 aa23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 AMOTQ4VCS5 1084 aa23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 HS1BP3Q53T59 392 aa23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 JARID2Q92833 1246 aaPredicted RBP23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 R3HCC1Q9Y3T6 440 aaKnown RBP23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 MYL6BP14649 208 aa23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 ZKSCAN5Q9Y2L8 839 aa23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.48■■□□□ 1.35
NKX6-1-201ENST00000295886 GRM8O00222 908 aa23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 ALDH1L1O75891 902 aa23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 KCNJ4P48050 445 aa23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 RUFY2Q8WXA3 655 aa23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 F13A1P00488 732 aa23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 PIP4K2AP48426 406 aaPredicted RBP23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 BOLA2Q9H3K6 86 aa23.47■■□□□ 1.35
NKX6-1-201ENST00000295886 GPATCH3Q96I76 525 aa23.46■■□□□ 1.35
NKX6-1-201ENST00000295886 PTMAP06454 111 aaKnown RBP23.46■■□□□ 1.35
NKX6-1-201ENST00000295886 ST3GAL1Q11201 340 aa23.46■■□□□ 1.35
NKX6-1-201ENST00000295886 NMIQ13287 307 aaPredicted RBP23.46■■□□□ 1.35
NKX6-1-201ENST00000295886 CHMP4AQ9BY43 222 aa23.46■■□□□ 1.35
NKX6-1-201ENST00000295886 RBM8AQ9Y5S9 174 aaKnown RBP23.46■■□□□ 1.35
NKX6-1-201ENST00000295886 ZC3H6P61129 1189 aaKnown RBP23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 DNM1Q05193 864 aaKnown RBP23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 TAF6LQ9Y6J9 622 aa23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 VPS37CA5D8V6 355 aaPredicted RBP23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 G3BP1Q13283 466 aaKnown RBP eCLIP23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 ME3Q16798 604 aa23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 LINS1Q8NG48 757 aa23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 EVI5LQ96CN4 794 aa23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 CYP46A1Q9Y6A2 500 aa23.45■■□□□ 1.34
NKX6-1-201ENST00000295886 CCDC171Q6TFL3 1326 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 EDC3Q96F86 508 aaKnown RBP23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 LMO7Q8WWI1 1683 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 IGKV5-2P06315 115 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 HCLS1P14317 486 aaPredicted RBP23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 NECTIN1Q15223 517 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 RIC3Q7Z5B4 369 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 ERC1Q8IUD2 1116 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 USP25Q9UHP3 1055 aa23.44■■□□□ 1.34
NKX6-1-201ENST00000295886 A0A0D9SFI3 127 aa23.43■■□□□ 1.34
NKX6-1-201ENST00000295886 ZNF500O60304 480 aaPredicted RBP23.43■■□□□ 1.34
NKX6-1-201ENST00000295886 PHF14O94880 888 aa23.43■■□□□ 1.34
NKX6-1-201ENST00000295886 PDIA6Q15084 440 aa23.43■■□□□ 1.34
NKX6-1-201ENST00000295886 ZSWIM6Q9HCJ5 1215 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms