RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 MAP3K15Q6ZN16 1313 aa34.7■■■■□ 3.15
SSU72-201ENST00000291386 SRCAPQ6ZRS2 3230 aa34.7■■■■□ 3.14
SSU72-201ENST00000291386 VAMP4O75379 141 aa34.69■■■■□ 3.14
SSU72-201ENST00000291386 NFIXQ14938 502 aa34.69■■■■□ 3.14
SSU72-201ENST00000291386 TTLL7Q6ZT98 887 aa34.69■■■■□ 3.14
SSU72-201ENST00000291386 ZNF652Q9Y2D9 606 aa34.69■■■■□ 3.14
SSU72-201ENST00000291386 KIF6Q6ZMV9 814 aa34.68■■■■□ 3.14
SSU72-201ENST00000291386 PARP3Q9Y6F1 533 aa34.68■■■■□ 3.14
SSU72-201ENST00000291386 DDR1Q08345 913 aa34.67■■■■□ 3.14
SSU72-201ENST00000291386 CDCA7LQ96GN5 454 aa34.67■■■■□ 3.14
SSU72-201ENST00000291386 NUP98P52948 1817 aa34.67■■■■□ 3.14
SSU72-201ENST00000291386 POLRMTO00411 1230 aaKnown RBP34.66■■■■□ 3.14
SSU72-201ENST00000291386 TBC1D9BQ66K14 1250 aa34.66■■■■□ 3.14
SSU72-201ENST00000291386 COPS6Q7L5N1 327 aa34.66■■■■□ 3.14
SSU72-201ENST00000291386 NRXN2Q9P2S2 1712 aa34.65■■■■□ 3.14
SSU72-201ENST00000291386 XAGE3Q8WTP9 111 aa34.65■■■■□ 3.14
SSU72-201ENST00000291386 FHDC1Q9C0D6 1143 aaPredicted RBP34.65■■■■□ 3.14
SSU72-201ENST00000291386 CACNA1FO60840 1977 aa34.65■■■■□ 3.14
SSU72-201ENST00000291386 HLFQ16534 295 aa34.64■■■■□ 3.14
SSU72-201ENST00000291386 AFDNP55196 1824 aaKnown RBP34.62■■■■□ 3.13
SSU72-201ENST00000291386 KIF13BQ9NQT8 1826 aa34.62■■■■□ 3.13
SSU72-201ENST00000291386 CD2APQ9Y5K6 639 aa34.62■■■■□ 3.13
SSU72-201ENST00000291386 GIGYF2Q6Y7W6 1299 aaKnown RBP34.61■■■■□ 3.13
SSU72-201ENST00000291386 SYT17Q9BSW7 474 aa34.61■■■■□ 3.13
SSU72-201ENST00000291386 STK31Q9BXU1 1019 aa34.61■■■■□ 3.13
SSU72-201ENST00000291386 AIMP1Q12904 312 aaKnown RBP34.6■■■■□ 3.13
SSU72-201ENST00000291386 SETDB2Q96T68 719 aa34.6■■■■□ 3.13
SSU72-201ENST00000291386 ZBTB3Q9H5J0 574 aa34.6■■■■□ 3.13
SSU72-201ENST00000291386 ATP10DQ9P241 1426 aa34.6■■■■□ 3.13
SSU72-201ENST00000291386 CARMIL3Q8ND23 1372 aa34.6■■■■□ 3.13
SSU72-201ENST00000291386 ZBED9Q6R2W3 1325 aa34.59■■■■□ 3.13
SSU72-201ENST00000291386 BICDL1Q6ZP65 573 aa34.59■■■■□ 3.13
SSU72-201ENST00000291386 C10orf71Q711Q0 1435 aa34.58■■■■□ 3.13
SSU72-201ENST00000291386 SERPINB2P05120 415 aa34.58■■■■□ 3.13
SSU72-201ENST00000291386 PHAXQ9H814 394 aaKnown RBP34.58■■■■□ 3.13
SSU72-201ENST00000291386 PLBD2Q8NHP8 589 aa34.57■■■■□ 3.12
SSU72-201ENST00000291386 ANKRD13DQ6ZTN6 518 aa34.56■■■■□ 3.12
SSU72-201ENST00000291386 NIP7Q9Y221 180 aaKnown RBP eCLIP34.55■■■■□ 3.12
SSU72-201ENST00000291386 SLC4A2P04920 1241 aa34.54■■■■□ 3.12
SSU72-201ENST00000291386 ZNF34Q8IZ26 560 aa34.54■■■■□ 3.12
SSU72-201ENST00000291386 ANKRD36CQ5JPF3 1778 aa34.54■■■■□ 3.12
SSU72-201ENST00000291386 HSP90AB3PQ58FF7 597 aa34.53■■■■□ 3.12
SSU72-201ENST00000291386 KLHL34Q8N239 644 aa34.53■■■■□ 3.12
SSU72-201ENST00000291386 TCERG1O14776 1098 aaKnown RBP34.52■■■■□ 3.12
SSU72-201ENST00000291386 ZNF428Q96B54 188 aa34.52■■■■□ 3.12
SSU72-201ENST00000291386 CT47B1P0C2W7 299 aaPredicted RBP34.51■■■■□ 3.12
SSU72-201ENST00000291386 ARFGEF2Q9Y6D5 1785 aa34.51■■■■□ 3.11
SSU72-201ENST00000291386 TCIRG1Q13488 830 aa34.5■■■■□ 3.11
SSU72-201ENST00000291386 TGFB2P61812 414 aa34.49■■■■□ 3.11
SSU72-201ENST00000291386 KIAA1551Q9HCM1 1747 aa34.49■■■■□ 3.11
SSU72-201ENST00000291386 IBTKQ9P2D0 1353 aaPredicted RBP34.49■■■■□ 3.11
SSU72-201ENST00000291386 DDX58O95786 925 aaKnown RBP34.48■■■■□ 3.11
SSU72-201ENST00000291386 PRR5LQ6MZQ0 368 aa34.48■■■■□ 3.11
SSU72-201ENST00000291386 NLGN2Q8NFZ4 835 aa34.48■■■■□ 3.11
SSU72-201ENST00000291386 PARP10Q53GL7 1025 aa34.47■■■■□ 3.11
SSU72-201ENST00000291386 G2E3Q7L622 706 aa34.47■■■■□ 3.11
SSU72-201ENST00000291386 UBN2Q6ZU65 1347 aa34.47■■■■□ 3.11
SSU72-201ENST00000291386 TPTE2Q6XPS3 522 aa34.46■■■■□ 3.11
SSU72-201ENST00000291386 RIC3Q7Z5B4 369 aa34.46■■■■□ 3.11
SSU72-201ENST00000291386 NBPF5PQ86XG9 351 aaPredicted RBP34.46■■■■□ 3.11
SSU72-201ENST00000291386 CNBD1Q8NA66 436 aa34.46■■■■□ 3.11
SSU72-201ENST00000291386 FLIIQ13045 1269 aa34.45■■■■□ 3.11
SSU72-201ENST00000291386 GPTP24298 496 aa34.44■■■■□ 3.1
SSU72-201ENST00000291386 KSR2Q6VAB6 950 aa34.44■■■■□ 3.1
SSU72-201ENST00000291386 NYXQ9GZU5 481 aa34.44■■■■□ 3.1
SSU72-201ENST00000291386 ISCA1Q9BUE6 129 aa34.43■■■■□ 3.1
SSU72-201ENST00000291386 PXDNLA1KZ92 1463 aa34.43■■■■□ 3.1
SSU72-201ENST00000291386 ANKRD31Q8N7Z5 1873 aa34.43■■■■□ 3.1
SSU72-201ENST00000291386 TRIM28Q13263 835 aaKnown RBP34.42■■■■□ 3.1
SSU72-201ENST00000291386 ALDH1L2Q3SY69 923 aa34.42■■■■□ 3.1
SSU72-201ENST00000291386 SUSD4Q5VX71 490 aa34.42■■■■□ 3.1
SSU72-201ENST00000291386 BRIP1Q9BX63 1249 aa34.42■■■■□ 3.1
SSU72-201ENST00000291386 ADCY9O60503 1353 aa34.41■■■■□ 3.1
SSU72-201ENST00000291386 ST5P78524 1137 aa34.41■■■■□ 3.1
SSU72-201ENST00000291386 PPP1R42Q7Z4L9 355 aa34.41■■■■□ 3.1
SSU72-201ENST00000291386 PI4KAP2A4QPH2 592 aa34.4■■■■□ 3.1
SSU72-201ENST00000291386 NLRP10Q86W26 655 aa34.4■■■■□ 3.1
SSU72-201ENST00000291386 PI4KAP1Q8N8J0 262 aa34.4■■■■□ 3.1
SSU72-201ENST00000291386 METTL22Q9BUU2 404 aaPredicted RBP34.4■■■■□ 3.1
SSU72-201ENST00000291386 N4BP2Q86UW6 1770 aaPredicted RBP34.4■■■■□ 3.1
SSU72-201ENST00000291386 RNF123Q5XPI4 1314 aa34.39■■■■□ 3.1
SSU72-201ENST00000291386 NTSR2O95665 410 aa34.39■■■■□ 3.1
SSU72-201ENST00000291386 MRPL50Q8N5N7 158 aaKnown RBP34.39■■■■□ 3.1
SSU72-201ENST00000291386 MAP3K2Q9Y2U5 619 aa34.39■■■■□ 3.1
SSU72-201ENST00000291386 NPHP1O15259 732 aa34.38■■■■□ 3.09
SSU72-201ENST00000291386 SSH1Q8WYL5 1049 aa34.38■■■■□ 3.09
SSU72-201ENST00000291386 PDZRN3Q9UPQ7 1066 aa34.38■■■■□ 3.09
SSU72-201ENST00000291386 FKBP5Q13451 457 aaPredicted RBP34.37■■■■□ 3.09
SSU72-201ENST00000291386 BRCA1P38398 1863 aaKnown RBP34.36■■■■□ 3.09
SSU72-201ENST00000291386 FAM177BA6PVY3 158 aa34.36■■■■□ 3.09
SSU72-201ENST00000291386 PDE6BP35913 854 aa34.36■■■■□ 3.09
SSU72-201ENST00000291386 UTP14AQ9BVJ6 771 aaKnown RBP34.36■■■■□ 3.09
SSU72-201ENST00000291386 RIC1Q4ADV7 1423 aa34.36■■■■□ 3.09
SSU72-201ENST00000291386 DPEP1P16444 411 aa34.35■■■■□ 3.09
SSU72-201ENST00000291386 DLEC1Q9Y238 1755 aa34.35■■■■□ 3.09
SSU72-201ENST00000291386 A0A0G2JLW4 131 aa34.34■■■■□ 3.09
SSU72-201ENST00000291386 KCNA3P22001 575 aa34.34■■■■□ 3.09
SSU72-201ENST00000291386 GTF2E1P29083 439 aaPredicted RBP34.34■■■■□ 3.09
SSU72-201ENST00000291386 CCDC24Q8N4L8 307 aa34.34■■■■□ 3.09
SSU72-201ENST00000291386 MYD88Q99836 296 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms