RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 SYCE3A1L190 88 aa12.75□□□□□ -0.37
ERCC3-201ENST00000285398 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-201ENST00000285398 A0A0G2JS52 829 aa12.74□□□□□ -0.37
ERCC3-201ENST00000285398 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
ERCC3-201ENST00000285398 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
ERCC3-201ENST00000285398 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
ERCC3-201ENST00000285398 BTBD11A6QL63 1104 aa12.74□□□□□ -0.37
ERCC3-201ENST00000285398 BRD2P25440 801 aaKnown RBP12.74□□□□□ -0.37
ERCC3-201ENST00000285398 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
ERCC3-201ENST00000285398 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
ERCC3-201ENST00000285398 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
ERCC3-201ENST00000285398 COL14A1Q05707 1796 aaKnown RBP12.73□□□□□ -0.37
ERCC3-201ENST00000285398 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-201ENST00000285398 ST18O60284 1047 aa12.73□□□□□ -0.37
ERCC3-201ENST00000285398 LETM1O95202 739 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-201ENST00000285398 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
ERCC3-201ENST00000285398 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
ERCC3-201ENST00000285398 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
ERCC3-201ENST00000285398 HTATSF1O43719 755 aaKnown RBP12.73□□□□□ -0.37
ERCC3-201ENST00000285398 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
ERCC3-201ENST00000285398 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
ERCC3-201ENST00000285398 PKP1Q13835 747 aa12.72□□□□□ -0.37
ERCC3-201ENST00000285398 SIRT2Q8IXJ6 389 aa12.72□□□□□ -0.37
ERCC3-201ENST00000285398 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.376e-7■■■■□ 22.3
ERCC3-201ENST00000285398 FAM182BQ5T319 152 aa12.71□□□□□ -0.37
ERCC3-201ENST00000285398 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
ERCC3-201ENST00000285398 USP21Q9UK80 565 aa12.71□□□□□ -0.37
ERCC3-201ENST00000285398 SPATA31A1Q5TZJ5 1347 aa12.71□□□□□ -0.37
ERCC3-201ENST00000285398 EIF2S2P20042 333 aaKnown RBP12.71□□□□□ -0.38
ERCC3-201ENST00000285398 UNC5CLQ8IV45 518 aa12.71□□□□□ -0.38
ERCC3-201ENST00000285398 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.38
ERCC3-201ENST00000285398 SYAP1Q96A49 352 aaPredicted RBP12.71□□□□□ -0.38
ERCC3-201ENST00000285398 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
ERCC3-201ENST00000285398 TSPY26PQ9H489 355 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■□□□ 14.2
ERCC3-201ENST00000285398 KIF3AQ9Y496 699 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 PLCH1Q4KWH8 1693 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 ABCC4O15439 1325 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 ANXA1P04083 346 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 CBX1P83916 185 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
ERCC3-201ENST00000285398 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
ERCC3-201ENST00000285398 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 SLC52A2Q9HAB3 445 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 SLIT2O94813 1529 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 PHF14O94880 888 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 SPATA31A5Q5VU36 1347 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 SPATA31A7Q8IWB4 1347 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 EXOC5O00471 708 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 CABP4P57796 275 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 NOLC1Q14978 699 aaKnown RBP eCLIP12.69□□□□□ -0.38
ERCC3-201ENST00000285398 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
ERCC3-201ENST00000285398 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
ERCC3-201ENST00000285398 AFF2P51816 1311 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 PIP4K2AP48426 406 aaPredicted RBP12.68□□□□□ -0.38
ERCC3-201ENST00000285398 EIF4A1P60842 406 aaKnown RBP12.68□□□□□ -0.38
ERCC3-201ENST00000285398 FAM184AQ8NB25 1140 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 ZDHHC9Q9Y397 364 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 TTC22Q5TAA0 569 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 TAF3Q5VWG9 929 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 G2E3Q7L622 706 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 ZGPATQ8N5A5 531 aaKnown RBP12.68□□□□□ -0.38
ERCC3-201ENST00000285398 ACSBG1Q96GR2 724 aa12.68□□□□□ -0.38
ERCC3-201ENST00000285398 PTCD1O75127 700 aaKnown RBP12.67□□□□□ -0.38
ERCC3-201ENST00000285398 DDB1Q16531 1140 aa12.67□□□□□ -0.38
ERCC3-201ENST00000285398 UVSSAQ2YD98 709 aa12.67□□□□□ -0.38
ERCC3-201ENST00000285398 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-201ENST00000285398 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
ERCC3-201ENST00000285398 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
ERCC3-201ENST00000285398 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
ERCC3-201ENST00000285398 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
ERCC3-201ENST00000285398 HDGFL1Q5TGJ6 251 aa12.65□□□□□ -0.38
ERCC3-201ENST00000285398 LRRC37A3O60309 1634 aa12.65□□□□□ -0.38
ERCC3-201ENST00000285398 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
ERCC3-201ENST00000285398 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-201ENST00000285398 PDCL2Q8N4E4 241 aa12.65□□□□□ -0.38
ERCC3-201ENST00000285398 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
ERCC3-201ENST00000285398 ATP2B3Q16720 1220 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 DIAPH3Q9NSV4 1193 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 SPTLC3Q9NUV7 552 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 F6X3S4 739 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 REC8O95072 547 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 CHAF1AQ13111 956 aaPredicted RBP12.64□□□□□ -0.39
ERCC3-201ENST00000285398 VPS72Q15906 364 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 TSC1Q92574 1164 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 PHAXQ9H814 394 aaKnown RBP12.64□□□□□ -0.39
ERCC3-201ENST00000285398 ASAP1Q9ULH1 1129 aa12.64□□□□□ -0.39
ERCC3-201ENST00000285398 PROSER3Q2NL68 480 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms