RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 KCNK17Q96T54 332 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 TBX22Q9Y458 520 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 FOXO3O43524 673 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 CLDN10P78369 228 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 FKBP5Q13451 457 aaPredicted RBP3.52□□□□□ -1.85
CHD1-201ENST00000284049 SLC4A10Q6U841 1118 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 RELL1Q8IUW5 271 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 TTC13Q8NBP0 860 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 NGLY1Q96IV0 654 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 UBA5Q9GZZ9 404 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 SYNJ1O43426 1573 aa3.52□□□□□ -1.85
CHD1-201ENST00000284049 ANP32CO43423 234 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 APBB1IPQ7Z5R6 666 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 FAM9BQ8IZU0 186 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 SLC43A3Q8NBI5 491 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 CEP164Q9UPV0 1460 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 DDAH1O94760 285 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 ATF3P18847 181 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 ATN1P54259 1190 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 PROX2Q3B8N5 592 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 APPBP2Q92624 585 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 ATG3Q9NT62 314 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 POLA1P09884 1462 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 MINDY4BA8MYZ0 360 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.51□□□□□ -1.85
CHD1-201ENST00000284049 GPR152Q8TDT2 470 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 GBP2P32456 591 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 PSMA6P60900 246 aaKnown RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 MRPL58Q14197 206 aaKnown RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 ZNF394Q53GI3 561 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 FBF1Q8TES7 1133 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 PRDM16Q9HAZ2 1276 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 CCNYL3P0C7X3 344 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 ATF4P18848 351 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 CCDC85BQ15834 202 aaPredicted RBP3.51□□□□□ -1.85
CHD1-201ENST00000284049 HOMER1Q86YM7 354 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 KIAA1468Q9P260 1216 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 SUGT1Q9Y2Z0 365 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 FAM69CQ0P6D2 419 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 LYPD8Q6UX82 237 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 BICDL1Q6ZP65 573 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 DEPDC7Q96QD5 511 aa3.51□□□□□ -1.85
CHD1-201ENST00000284049 MAP3K1Q13233 1512 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 GIGYF1O75420 1035 aaPredicted RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 RPLP1P05386 114 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 IRX5P78411 483 aaPredicted RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 LRCH3Q96II8 777 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 ZHX3Q9H4I2 956 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 HOMER2Q9NSB8 354 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 SERTAD1Q9UHV2 236 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 RAD51AP2Q09MP3 1159 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 ARID5BQ14865 1188 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 FAM98CQ17RN3 349 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 EYA1Q99502 592 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 KDM5BQ9UGL1 1544 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 GPR37L1O60883 481 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 EIF3JO75822 258 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 ARHGAP4P98171 946 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 ADAMTS12P58397 1594 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 ATAD2Q6PL18 1390 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 NR1I2O75469 434 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 PARNO95453 639 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 FOXD4L6Q3SYB3 417 aaPredicted RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 FOXD4L3Q6VB84 417 aaPredicted RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 PNMA2Q9UL42 364 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 AKAP2Q9Y2D5 859 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 GJA3Q9Y6H8 435 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 MCM4P33991 863 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 LARP1BQ659C4 914 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 ANKS3Q6ZW76 656 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 KIAA0825Q8IV33 1275 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 SGSM3Q96HU1 749 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 GPATCH3Q96I76 525 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 PIF1Q9H611 641 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 DDX56Q9NY93 547 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 MCM8Q9UJA3 840 aa3.5□□□□□ -1.85
CHD1-201ENST00000284049 FNDC3AQ9Y2H6 1198 aaKnown RBP3.5□□□□□ -1.85
CHD1-201ENST00000284049 MTERF2Q49AM1 385 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 ERFEQ4G0M1 354 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 SPTY2D1Q68D10 685 aaPredicted RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 GOLGA6CA6NDK9 693 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 GOLGA6BA6NDN3 693 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 CPNE3O75131 537 aaKnown RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 GOLGA6DP0CG33 693 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 RNF19BQ6ZMZ0 732 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 GAS2L2Q8NHY3 880 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 NAP1L5Q96NT1 182 aaPredicted RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 TINF2Q9BSI4 451 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 GOLGA6AQ9NYA3 693 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 SAMD9Q5K651 1589 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 OCLNQ16625 522 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 ARSIQ5FYB1 569 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 SEC16BQ96JE7 1060 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 ZEB1P37275 1124 aaPredicted RBP3.49□□□□□ -1.85
CHD1-201ENST00000284049 CAPN12Q6ZSI9 719 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 C16orf86Q6ZW13 317 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 NLGN1Q8N2Q7 840 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 EDEM1Q92611 657 aa3.49□□□□□ -1.85
CHD1-201ENST00000284049 SIRPGQ9P1W8 387 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms