RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 ADAMTS7Q9UKP4 1686 aa16.68■□□□□ 0.26
MRPS28-201ENST00000276585 CASP8AP2Q9UKL3 1982 aa16.68■□□□□ 0.26
MRPS28-201ENST00000276585 PDE6BP35913 854 aa16.67■□□□□ 0.26
MRPS28-201ENST00000276585 LTBP1Q14766 1721 aa16.67■□□□□ 0.26
MRPS28-201ENST00000276585 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
MRPS28-201ENST00000276585 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
MRPS28-201ENST00000276585 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
MRPS28-201ENST00000276585 MAP2K2P36507 400 aa16.66■□□□□ 0.26
MRPS28-201ENST00000276585 MTHFSP49914 203 aa16.66■□□□□ 0.26
MRPS28-201ENST00000276585 TJP1Q07157 1748 aa16.66■□□□□ 0.26
MRPS28-201ENST00000276585 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
MRPS28-201ENST00000276585 COL15A1P39059 1388 aa16.65■□□□□ 0.26
MRPS28-201ENST00000276585 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
MRPS28-201ENST00000276585 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
MRPS28-201ENST00000276585 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
MRPS28-201ENST00000276585 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.25
MRPS28-201ENST00000276585 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
MRPS28-201ENST00000276585 NFATC2IPQ8NCF5 419 aa16.64■□□□□ 0.25
MRPS28-201ENST00000276585 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
MRPS28-201ENST00000276585 BRIP1Q9BX63 1249 aa16.64■□□□□ 0.25
MRPS28-201ENST00000276585 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
MRPS28-201ENST00000276585 PRPF40BQ6NWY9 871 aaKnown RBP16.63■□□□□ 0.25
MRPS28-201ENST00000276585 NPHP1O15259 732 aa16.62■□□□□ 0.25
MRPS28-201ENST00000276585 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
MRPS28-201ENST00000276585 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
MRPS28-201ENST00000276585 ZNF277Q9NRM2 450 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-201ENST00000276585 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
MRPS28-201ENST00000276585 COL11A2P13942 1736 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-201ENST00000276585 BRPF1P55201 1214 aaPredicted RBP16.6■□□□□ 0.25
MRPS28-201ENST00000276585 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
MRPS28-201ENST00000276585 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
MRPS28-201ENST00000276585 GCC1Q96CN9 775 aa16.6■□□□□ 0.25
MRPS28-201ENST00000276585 ANKRD31Q8N7Z5 1873 aa16.6■□□□□ 0.25
MRPS28-201ENST00000276585 MRC1P22897 1456 aa16.6■□□□□ 0.25
MRPS28-201ENST00000276585 TRAF5O00463 557 aa16.59■□□□□ 0.25
MRPS28-201ENST00000276585 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-201ENST00000276585 STYK1Q6J9G0 422 aa16.59■□□□□ 0.25
MRPS28-201ENST00000276585 PRR5LQ6MZQ0 368 aa16.59■□□□□ 0.25
MRPS28-201ENST00000276585 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
MRPS28-201ENST00000276585 LMOD1P29536 600 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-201ENST00000276585 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
MRPS28-201ENST00000276585 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-201ENST00000276585 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
MRPS28-201ENST00000276585 CST9Q5W186 159 aa16.58■□□□□ 0.24
MRPS28-201ENST00000276585 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
MRPS28-201ENST00000276585 CIAPIN1Q6FI81 312 aa16.58■□□□□ 0.24
MRPS28-201ENST00000276585 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-201ENST00000276585 CACNA1SQ13698 1873 aa16.58■□□□□ 0.24
MRPS28-201ENST00000276585 GPC2Q8N158 579 aa16.57■□□□□ 0.24
MRPS28-201ENST00000276585 MASTLQ96GX5 879 aa16.57■□□□□ 0.24
MRPS28-201ENST00000276585 DIAPH1O60610 1272 aaKnown RBP16.56■□□□□ 0.24
MRPS28-201ENST00000276585 HMOX1P09601 288 aa16.56■□□□□ 0.24
MRPS28-201ENST00000276585 CANXP27824 592 aaKnown RBP16.56■□□□□ 0.24
MRPS28-201ENST00000276585 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
MRPS28-201ENST00000276585 GJA3Q9Y6H8 435 aa16.56■□□□□ 0.24
MRPS28-201ENST00000276585 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
MRPS28-201ENST00000276585 SRGNP10124 158 aa16.55■□□□□ 0.24
MRPS28-201ENST00000276585 ST5P78524 1137 aa16.55■□□□□ 0.24
MRPS28-201ENST00000276585 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
MRPS28-201ENST00000276585 FZD9O00144 591 aa16.54■□□□□ 0.24
MRPS28-201ENST00000276585 SAPCD2Q86UD0 394 aa16.54■□□□□ 0.24
MRPS28-201ENST00000276585 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
MRPS28-201ENST00000276585 A0A087WZG4 1122 aa16.53■□□□□ 0.24
MRPS28-201ENST00000276585 CELF2O95319 508 aaKnown RBP16.53■□□□□ 0.24
MRPS28-201ENST00000276585 PPP2R1AP30153 589 aa16.53■□□□□ 0.24
MRPS28-201ENST00000276585 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
MRPS28-201ENST00000276585 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
MRPS28-201ENST00000276585 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.24
MRPS28-201ENST00000276585 JDP2Q8WYK2 163 aa16.52■□□□□ 0.24
MRPS28-201ENST00000276585 ZNF330Q9Y3S2 320 aaPredicted RBP16.52■□□□□ 0.24
MRPS28-201ENST00000276585 EPS15P42566 896 aa16.51■□□□□ 0.23
MRPS28-201ENST00000276585 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
MRPS28-201ENST00000276585 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
MRPS28-201ENST00000276585 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
MRPS28-201ENST00000276585 RTKN2Q8IZC4 609 aa16.51■□□□□ 0.23
MRPS28-201ENST00000276585 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
MRPS28-201ENST00000276585 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
MRPS28-201ENST00000276585 OLFM4Q6UX06 510 aa16.5■□□□□ 0.23
MRPS28-201ENST00000276585 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
MRPS28-201ENST00000276585 SYNE4Q8N205 404 aa16.5■□□□□ 0.23
MRPS28-201ENST00000276585 HHIPL1Q96JK4 782 aa16.5■□□□□ 0.23
MRPS28-201ENST00000276585 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
MRPS28-201ENST00000276585 ZNF408Q9H9D4 720 aa16.5■□□□□ 0.23
MRPS28-201ENST00000276585 DLG5Q8TDM6 1919 aa16.49■□□□□ 0.23
MRPS28-201ENST00000276585 NOGQ13253 232 aa16.49■□□□□ 0.23
MRPS28-201ENST00000276585 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
MRPS28-201ENST00000276585 SCNN1DP51172 638 aa16.48■□□□□ 0.23
MRPS28-201ENST00000276585 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
MRPS28-201ENST00000276585 ZIC5Q96T25 663 aa16.48■□□□□ 0.23
MRPS28-201ENST00000276585 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
MRPS28-201ENST00000276585 TBC1D2BQ9UPU7 963 aa16.48■□□□□ 0.23
MRPS28-201ENST00000276585 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
MRPS28-201ENST00000276585 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
MRPS28-201ENST00000276585 NPR1P16066 1061 aa16.47■□□□□ 0.23
MRPS28-201ENST00000276585 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
MRPS28-201ENST00000276585 STARD3NLO95772 234 aa16.46■□□□□ 0.23
MRPS28-201ENST00000276585 CTU1Q7Z7A3 348 aaKnown RBP16.45■□□□□ 0.22
MRPS28-201ENST00000276585 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
MRPS28-201ENST00000276585 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
MRPS28-201ENST00000276585 GLIS2Q9BZE0 524 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms