RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 ADCY10Q96PN6 1610 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 PSMA5P28066 241 aa13.48□□□□□ -0.25
SKP2-202ENST00000274255 PRAMEF22A3QJZ6 481 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 HSP90AB4PQ58FF6 505 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 CHGBP05060 677 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 AMOTL2Q9Y2J4 779 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 NPATQ14207 1427 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 ERCC6L2Q5T890 1561 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 NSD2O96028 1365 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 SYNE3Q6ZMZ3 975 aa13.47□□□□□ -0.25
SKP2-202ENST00000274255 CDC42BPAQ5VT25 1732 aa13.46□□□□□ -0.25
SKP2-202ENST00000274255 RXRAP19793 462 aa13.46□□□□□ -0.25
SKP2-202ENST00000274255 ARID5BQ14865 1188 aa13.46□□□□□ -0.25
SKP2-202ENST00000274255 ME3Q16798 604 aa13.46□□□□□ -0.25
SKP2-202ENST00000274255 MNS1Q8NEH6 495 aa13.46□□□□□ -0.25
SKP2-202ENST00000274255 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.25
SKP2-202ENST00000274255 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
SKP2-202ENST00000274255 PDCP20941 246 aa13.46□□□□□ -0.26
SKP2-202ENST00000274255 PTPN14Q15678 1187 aa13.46□□□□□ -0.26
SKP2-202ENST00000274255 KAT6BQ8WYB5 2073 aa13.45□□□□□ -0.26
SKP2-202ENST00000274255 GOLIM4O00461 696 aa13.45□□□□□ -0.26
SKP2-202ENST00000274255 NFXL1Q6ZNB6 911 aa13.45□□□□□ -0.26
SKP2-202ENST00000274255 LETM1O95202 739 aaPredicted RBP13.45□□□□□ -0.26
SKP2-202ENST00000274255 VGLL3A8MV65 326 aa13.45□□□□□ -0.26
SKP2-202ENST00000274255 MTERF4Q7Z6M4 381 aaKnown RBP13.45□□□□□ -0.26
SKP2-202ENST00000274255 FSIP1Q8NA03 581 aa13.45□□□□□ -0.26
SKP2-202ENST00000274255 NLRP1Q9C000 1473 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 DDX58O95786 925 aaKnown RBP13.44□□□□□ -0.26
SKP2-202ENST00000274255 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 YTHDC2Q9H6S0 1430 aaKnown RBP13.44□□□□□ -0.26
SKP2-202ENST00000274255 SERPINC1P01008 464 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 MARCKSP29966 332 aaPredicted RBP13.44□□□□□ -0.26
SKP2-202ENST00000274255 CREB3L3Q68CJ9 461 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 SGSM2O43147 1006 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 SKILP12757 684 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 PDE4CQ08493 712 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 CCAR1Q8IX12 1150 aaKnown RBP13.44□□□□□ -0.26
SKP2-202ENST00000274255 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 CPLX3Q8WVH0 158 aa13.44□□□□□ -0.26
SKP2-202ENST00000274255 ASXL2Q76L83 1435 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 TMC6Q7Z403 805 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
SKP2-202ENST00000274255 APOBRQ0VD83 1088 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
SKP2-202ENST00000274255 ZNF500O60304 480 aaPredicted RBP13.43□□□□□ -0.26
SKP2-202ENST00000274255 URI1O94763 535 aaPredicted RBP13.43□□□□□ -0.26
SKP2-202ENST00000274255 Q6ZUG5 572 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 TLR7Q9NYK1 1049 aaKnown RBP13.43□□□□□ -0.26
SKP2-202ENST00000274255 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
SKP2-202ENST00000274255 A0A1B0GVL5 298 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
SKP2-202ENST00000274255 FAM200AQ8TCP9 573 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 TPCN1Q9ULQ1 816 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 NR1I2O75469 434 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 TPM4P67936 248 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 DDIT3P35638 169 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 RALYLQ86SE5 291 aaKnown RBP13.42□□□□□ -0.26
SKP2-202ENST00000274255 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
SKP2-202ENST00000274255 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
SKP2-202ENST00000274255 TIMM10P62072 90 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 RASSF8Q8NHQ8 419 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 ZBTB3Q9H5J0 574 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 KDM5AP29375 1690 aaKnown RBP13.41□□□□□ -0.26
SKP2-202ENST00000274255 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 CFAP100Q494V2 611 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
SKP2-202ENST00000274255 MCM5P33992 734 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 GTF2F1P35269 517 aaKnown RBP eCLIP13.41□□□□□ -0.26
SKP2-202ENST00000274255 CEP135Q66GS9 1140 aa13.41□□□□□ -0.26
SKP2-202ENST00000274255 HSPA4P34932 840 aa13.4□□□□□ -0.26
SKP2-202ENST00000274255 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
SKP2-202ENST00000274255 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
SKP2-202ENST00000274255 COPS6Q7L5N1 327 aa13.4□□□□□ -0.26
SKP2-202ENST00000274255 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
SKP2-202ENST00000274255 A0A087WZG4 1122 aa13.4□□□□□ -0.27
SKP2-202ENST00000274255 A0A0D9SFI3 127 aa13.4□□□□□ -0.27
SKP2-202ENST00000274255 CHRNA2Q15822 529 aa13.4□□□□□ -0.27
SKP2-202ENST00000274255 ABCC1P33527 1531 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 GOLGA8FQ08AF8 430 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 GOLGA8DPQ0D2H9 430 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 PLEKHO1Q53GL0 409 aaPredicted RBP13.39□□□□□ -0.27
SKP2-202ENST00000274255 NEK1Q96PY6 1258 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 SCAND2PQ9GZW5 306 aaPredicted RBP13.39□□□□□ -0.27
SKP2-202ENST00000274255 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 ABCA8O94911 1581 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
SKP2-202ENST00000274255 PPARDQ03181 441 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 HS1BP3Q53T59 392 aa13.39□□□□□ -0.27
SKP2-202ENST00000274255 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms