RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 SCN11AQ9UI33 1791 aa24.51■■□□□ 1.51
RAB5A-201ENST00000273047 MTX1Q13505 466 aa24.51■■□□□ 1.51
RAB5A-201ENST00000273047 CLASRPQ8N2M8 674 aaKnown RBP24.51■■□□□ 1.51
RAB5A-201ENST00000273047 NAP1L5Q96NT1 182 aaPredicted RBP24.51■■□□□ 1.51
RAB5A-201ENST00000273047 AOX1Q06278 1338 aa24.51■■□□□ 1.51
RAB5A-201ENST00000273047 COL18A1P39060 1754 aa24.51■■□□□ 1.51
RAB5A-201ENST00000273047 DDX58O95786 925 aaKnown RBP24.51■■□□□ 1.51
RAB5A-201ENST00000273047 MCCP23508 829 aa24.51■■□□□ 1.51
RAB5A-201ENST00000273047 EPHA10Q5JZY3 1008 aa24.51■■□□□ 1.51
RAB5A-201ENST00000273047 AACSQ86V21 672 aa24.5■■□□□ 1.51
RAB5A-201ENST00000273047 GAS2L3Q86XJ1 694 aa24.5■■□□□ 1.51
RAB5A-201ENST00000273047 CCDC8Q9H0W5 538 aaPredicted RBP24.5■■□□□ 1.51
RAB5A-201ENST00000273047 SPATA31A3Q5VYP0 1347 aa24.5■■□□□ 1.51
RAB5A-201ENST00000273047 SASH1O94885 1247 aa24.5■■□□□ 1.51
RAB5A-201ENST00000273047 TLR7Q9NYK1 1049 aaKnown RBP24.5■■□□□ 1.51
RAB5A-201ENST00000273047 TNS3Q68CZ2 1445 aa24.49■■□□□ 1.51
RAB5A-201ENST00000273047 DTNBO60941 627 aa24.49■■□□□ 1.51
RAB5A-201ENST00000273047 TTC5Q8N0Z6 440 aa24.49■■□□□ 1.51
RAB5A-201ENST00000273047 CNTROBQ8N137 903 aa24.49■■□□□ 1.51
RAB5A-201ENST00000273047 CYP2E1P05181 493 aaPredicted RBP24.49■■□□□ 1.51
RAB5A-201ENST00000273047 ADAMTS7Q9UKP4 1686 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 ATP5J2-PTCD1G3V325 749 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 SGSM2O43147 1006 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
RAB5A-201ENST00000273047 HSP90AB4PQ58FF6 505 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 CRYBG1Q9Y4K1 1723 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 NEURL1BA8MQ27 555 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 IFIT2P09913 472 aaKnown RBP24.48■■□□□ 1.51
RAB5A-201ENST00000273047 BRINP3Q76B58 766 aa24.48■■□□□ 1.51
RAB5A-201ENST00000273047 CPA1P15085 419 aa24.46■■□□□ 1.51
RAB5A-201ENST00000273047 CABP4P57796 275 aa24.46■■□□□ 1.51
RAB5A-201ENST00000273047 RASEFQ8IZ41 740 aa24.46■■□□□ 1.51
RAB5A-201ENST00000273047 EAF2Q96CJ1 260 aaPredicted RBP24.46■■□□□ 1.51
RAB5A-201ENST00000273047 MRE11P49959 708 aa24.46■■□□□ 1.51
RAB5A-201ENST00000273047 NUCB2P80303 420 aa24.46■■□□□ 1.51
RAB5A-201ENST00000273047 DCAF5Q96JK2 942 aa24.46■■□□□ 1.51
RAB5A-201ENST00000273047 DDX49Q9Y6V7 483 aaKnown RBP24.45■■□□□ 1.51
RAB5A-201ENST00000273047 HSPA4P34932 840 aa24.45■■□□□ 1.5
RAB5A-201ENST00000273047 GCKRQ14397 625 aa24.45■■□□□ 1.5
RAB5A-201ENST00000273047 FOXD4L6Q3SYB3 417 aaPredicted RBP24.45■■□□□ 1.5
RAB5A-201ENST00000273047 LARP1Q6PKG0 1096 aaKnown RBP24.45■■□□□ 1.5
RAB5A-201ENST00000273047 FOXD4L3Q6VB84 417 aaPredicted RBP24.45■■□□□ 1.5
RAB5A-201ENST00000273047 ANKRD13DQ6ZTN6 518 aa24.45■■□□□ 1.5
RAB5A-201ENST00000273047 LRP10Q7Z4F1 713 aa24.45■■□□□ 1.5
RAB5A-201ENST00000273047 SNRPA1P09661 255 aaKnown RBP24.44■■□□□ 1.5
RAB5A-201ENST00000273047 DDX54Q8TDD1 881 aaKnown RBP24.44■■□□□ 1.5
RAB5A-201ENST00000273047 LSG1Q9H089 658 aaKnown RBP24.44■■□□□ 1.5
RAB5A-201ENST00000273047 ECHDC1Q9NTX5 307 aa24.44■■□□□ 1.5
RAB5A-201ENST00000273047 GLRX3O76003 335 aaKnown RBP24.44■■□□□ 1.5
RAB5A-201ENST00000273047 NCLP19338 710 aaKnown RBP24.44■■□□□ 1.5
RAB5A-201ENST00000273047 NEXNQ0ZGT2 675 aa24.44■■□□□ 1.5
RAB5A-201ENST00000273047 PRDM11Q9NQV5 511 aa24.44■■□□□ 1.5
RAB5A-201ENST00000273047 G3BP1Q13283 466 aaKnown RBP eCLIP24.43■■□□□ 1.5
RAB5A-201ENST00000273047 CWC22Q9HCG8 908 aaKnown RBP24.43■■□□□ 1.5
RAB5A-201ENST00000273047 PTH1RQ03431 593 aa24.43■■□□□ 1.5
RAB5A-201ENST00000273047 TOM1L2Q6ZVM7 507 aa24.43■■□□□ 1.5
RAB5A-201ENST00000273047 GOLGA6L22H0YM25 854 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 CLEC17AQ6ZS10 378 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 METTL22Q9BUU2 404 aaPredicted RBP24.42■■□□□ 1.5
RAB5A-201ENST00000273047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.42■■□□□ 1.53e-6■■■□□ 15.8
RAB5A-201ENST00000273047 SNX14Q9Y5W7 946 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 UTYO14607 1347 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 ANAPC15P60006 121 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 UBE3BQ7Z3V4 1068 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 DIAPH3Q9NSV4 1193 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 TTC41PQ6P2S7 1318 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 RAD50Q92878 1312 aa24.42■■□□□ 1.5
RAB5A-201ENST00000273047 FMNL2Q96PY5 1086 aa24.41■■□□□ 1.5
RAB5A-201ENST00000273047 BOLA2Q9H3K6 86 aa24.41■■□□□ 1.5
RAB5A-201ENST00000273047 GRPEL1Q9HAV7 217 aa24.41■■□□□ 1.5
RAB5A-201ENST00000273047 DCCP43146 1447 aa24.41■■□□□ 1.5
RAB5A-201ENST00000273047 PRPF40AO75400 957 aaKnown RBP24.41■■□□□ 1.5
RAB5A-201ENST00000273047 NDUFB9Q9Y6M9 179 aa24.4■■□□□ 1.5
RAB5A-201ENST00000273047 USP42Q9H9J4 1324 aaKnown RBP24.4■■□□□ 1.5
RAB5A-201ENST00000273047 EDC3Q96F86 508 aaKnown RBP24.4■■□□□ 1.5
RAB5A-201ENST00000273047 FAM227BQ96M60 508 aa24.4■■□□□ 1.5
RAB5A-201ENST00000273047 STRN4Q9NRL3 753 aa24.4■■□□□ 1.5
RAB5A-201ENST00000273047 LMBRD1Q9NUN5 540 aa24.4■■□□□ 1.5
RAB5A-201ENST00000273047 KIAA1211Q6ZU35 1233 aa24.39■■□□□ 1.5
RAB5A-201ENST00000273047 SKOR2Q2VWA4 1001 aaPredicted RBP24.39■■□□□ 1.49
RAB5A-201ENST00000273047 GLIPR1L2Q4G1C9 344 aa24.38■■□□□ 1.49
RAB5A-201ENST00000273047 ERC1Q8IUD2 1116 aa24.38■■□□□ 1.49
RAB5A-201ENST00000273047 CCDC9Q9Y3X0 531 aaKnown RBP24.38■■□□□ 1.49
RAB5A-201ENST00000273047 XIRP1Q702N8 1843 aaKnown RBP24.38■■□□□ 1.49
RAB5A-201ENST00000273047 ZNF335Q9H4Z2 1342 aaPredicted RBP24.38■■□□□ 1.49
RAB5A-201ENST00000273047 COL9A3Q14050 684 aaPredicted RBP24.37■■□□□ 1.49
RAB5A-201ENST00000273047 CAVIN1Q6NZI2 390 aaKnown RBP24.37■■□□□ 1.49
RAB5A-201ENST00000273047 CUL4AQ13619 759 aa24.37■■□□□ 1.49
RAB5A-201ENST00000273047 ADCK5Q3MIX3 580 aa24.37■■□□□ 1.49
RAB5A-201ENST00000273047 NBPF26B4DH59 902 aa24.36■■□□□ 1.49
RAB5A-201ENST00000273047 NBPF14Q5TI25 921 aa24.36■■□□□ 1.49
RAB5A-201ENST00000273047 NBPF10Q6P3W6 841 aaKnown RBP24.36■■□□□ 1.49
RAB5A-201ENST00000273047 NBPF15Q8N660 670 aa24.36■■□□□ 1.49
RAB5A-201ENST00000273047 A0A087WZG4 1122 aa24.36■■□□□ 1.49
RAB5A-201ENST00000273047 PRPF40BQ6NWY9 871 aaKnown RBP24.36■■□□□ 1.49
RAB5A-201ENST00000273047 GPATCH3Q96I76 525 aa24.36■■□□□ 1.49
RAB5A-201ENST00000273047 RBM27Q9P2N5 1060 aaKnown RBP24.36■■□□□ 1.49
RAB5A-201ENST00000273047 A1BGP04217 495 aa24.35■■□□□ 1.49
RAB5A-201ENST00000273047 CHGBP05060 677 aa24.35■■□□□ 1.49
RAB5A-201ENST00000273047 KLHL40Q2TBA0 621 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms