RNA–Protein interactions for RNA: ENST00000272102.9

ARF1-201, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-201ENST00000272102 TRAPPC3LQ5T215 181 aa13.91□□□□□ -0.18
ARF1-201ENST00000272102 TRMT2AQ8IZ69 625 aaKnown RBP13.91□□□□□ -0.18
ARF1-201ENST00000272102 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
ARF1-201ENST00000272102 LRP10Q7Z4F1 713 aa13.91□□□□□ -0.18
ARF1-201ENST00000272102 VAMP4O75379 141 aa13.9□□□□□ -0.18
ARF1-201ENST00000272102 MS4A1P11836 297 aa13.9□□□□□ -0.18
ARF1-201ENST00000272102 RFC4P35249 363 aa13.9□□□□□ -0.18
ARF1-201ENST00000272102 TTLL7Q6ZT98 887 aa13.9□□□□□ -0.18
ARF1-201ENST00000272102 FRAT1Q92837 279 aaPredicted RBP13.9□□□□□ -0.18
ARF1-201ENST00000272102 QSER1Q2KHR3 1735 aa13.9□□□□□ -0.18
ARF1-201ENST00000272102 HOXB7P09629 217 aa13.89□□□□□ -0.19
ARF1-201ENST00000272102 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
ARF1-201ENST00000272102 AIMP1Q12904 312 aaKnown RBP13.89□□□□□ -0.19
ARF1-201ENST00000272102 HSP90AA2PQ14568 343 aaPredicted RBP13.89□□□□□ -0.19
ARF1-201ENST00000272102 USPL1Q5W0Q7 1092 aa13.89□□□□□ -0.19
ARF1-201ENST00000272102 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
ARF1-201ENST00000272102 DZIP3Q86Y13 1208 aaKnown RBP13.88□□□□□ -0.19
ARF1-201ENST00000272102 BCL2L13Q9BXK5 485 aa13.88□□□□□ -0.19
ARF1-201ENST00000272102 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
ARF1-201ENST00000272102 USP42Q9H9J4 1324 aaKnown RBP13.88□□□□□ -0.19
ARF1-201ENST00000272102 GYS1P13807 737 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 ADRA2BP18089 450 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 XAGE3Q8WTP9 111 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 COPS6Q7L5N1 327 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 G2E3Q7L622 706 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
ARF1-201ENST00000272102 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
ARF1-201ENST00000272102 GOLGB1Q14789 3259 aaKnown RBP13.86□□□□□ -0.19
ARF1-201ENST00000272102 ZPR1O75312 459 aa13.86□□□□□ -0.19
ARF1-201ENST00000272102 CAMTA2O94983 1202 aa13.86□□□□□ -0.19
ARF1-201ENST00000272102 HLFQ16534 295 aa13.86□□□□□ -0.19
ARF1-201ENST00000272102 CCDC30Q5VVM6 783 aa13.86□□□□□ -0.19
ARF1-201ENST00000272102 FLAD1Q8NFF5 587 aa13.86□□□□□ -0.19
ARF1-201ENST00000272102 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
ARF1-201ENST00000272102 NARFQ9UHQ1 456 aa13.86□□□□□ -0.19
ARF1-201ENST00000272102 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
ARF1-201ENST00000272102 BICDL1Q6ZP65 573 aa13.85□□□□□ -0.19
ARF1-201ENST00000272102 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
ARF1-201ENST00000272102 MTFR1LQ9H019 292 aa13.85□□□□□ -0.19
ARF1-201ENST00000272102 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
ARF1-201ENST00000272102 HMGB2P26583 209 aaKnown RBP13.84□□□□□ -0.19
ARF1-201ENST00000272102 PTGER2P43116 358 aa13.84□□□□□ -0.19
ARF1-201ENST00000272102 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
ARF1-201ENST00000272102 PDE4AP27815 886 aa13.84□□□□□ -0.19
ARF1-201ENST00000272102 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
ARF1-201ENST00000272102 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
ARF1-201ENST00000272102 SSH1Q8WYL5 1049 aa13.83□□□□□ -0.2
ARF1-201ENST00000272102 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
ARF1-201ENST00000272102 STK31Q9BXU1 1019 aa13.83□□□□□ -0.2
ARF1-201ENST00000272102 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
ARF1-201ENST00000272102 MMP10P09238 476 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 DDR1Q08345 913 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 LRP5O75197 1615 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 BCORQ6W2J9 1755 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 MAP3K15Q6ZN16 1313 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 A0A087WZG4 1122 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 NFIXQ14938 502 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 SPON1Q9HCB6 807 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 HYPKQ9NX55 129 aa13.82□□□□□ -0.2
ARF1-201ENST00000272102 KIF6Q6ZMV9 814 aa13.81□□□□□ -0.2
ARF1-201ENST00000272102 FAM177BA6PVY3 158 aa13.8□□□□□ -0.2
ARF1-201ENST00000272102 GPTP24298 496 aa13.8□□□□□ -0.2
ARF1-201ENST00000272102 FLIIQ13045 1269 aa13.8□□□□□ -0.2
ARF1-201ENST00000272102 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
ARF1-201ENST00000272102 ANKRD13DQ6ZTN6 518 aa13.8□□□□□ -0.2
ARF1-201ENST00000272102 NLGN1Q8N2Q7 840 aa13.8□□□□□ -0.2
ARF1-201ENST00000272102 NUP98P52948 1817 aa13.79□□□□□ -0.2
ARF1-201ENST00000272102 F6X3S4 739 aa13.79□□□□□ -0.2
ARF1-201ENST00000272102 BCAR3O75815 825 aa13.79□□□□□ -0.2
ARF1-201ENST00000272102 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
ARF1-201ENST00000272102 MRPL50Q8N5N7 158 aaKnown RBP13.79□□□□□ -0.2
ARF1-201ENST00000272102 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
ARF1-201ENST00000272102 ADCY9O60503 1353 aa13.79□□□□□ -0.2
ARF1-201ENST00000272102 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
ARF1-201ENST00000272102 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 ATP5J2-PTCD1G3V325 749 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 POLRMTO00411 1230 aaKnown RBP13.78□□□□□ -0.2
ARF1-201ENST00000272102 TM4SF1P30408 202 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 FKBP5Q13451 457 aaPredicted RBP13.78□□□□□ -0.2
ARF1-201ENST00000272102 KLHL34Q8N239 644 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
ARF1-201ENST00000272102 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
ARF1-201ENST00000272102 UTRNP46939 3433 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 ERVV-1B6SEH8 477 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 GIGYF2Q6Y7W6 1299 aaKnown RBP13.78□□□□□ -0.2
ARF1-201ENST00000272102 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
ARF1-201ENST00000272102 ARFGEF2Q9Y6D5 1785 aa13.77□□□□□ -0.2
ARF1-201ENST00000272102 L1TD1Q5T7N2 865 aaKnown RBP13.77□□□□□ -0.21
ARF1-201ENST00000272102 RIC3Q7Z5B4 369 aa13.77□□□□□ -0.21
ARF1-201ENST00000272102 CARMIL3Q8ND23 1372 aa13.76□□□□□ -0.21
ARF1-201ENST00000272102 POLD1P28340 1107 aa13.76□□□□□ -0.21
ARF1-201ENST00000272102 CLEC4GQ6UXB4 293 aa13.76□□□□□ -0.21
ARF1-201ENST00000272102 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
ARF1-201ENST00000272102 MYD88Q99836 296 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms