RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 SLU7O95391 586 aaKnown RBP17.28■□□□□ 0.36
PDPK1-201ENST00000268673 HMGB1P09429 215 aaKnown RBP17.28■□□□□ 0.36
PDPK1-201ENST00000268673 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
PDPK1-201ENST00000268673 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
PDPK1-201ENST00000268673 USP8P40818 1118 aa17.28■□□□□ 0.36
PDPK1-201ENST00000268673 CCDC102AQ96A19 550 aa17.28■□□□□ 0.36
PDPK1-201ENST00000268673 FOXO3O43524 673 aa17.27■□□□□ 0.36
PDPK1-201ENST00000268673 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
PDPK1-201ENST00000268673 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
PDPK1-201ENST00000268673 CTNNA3Q9UI47 895 aa17.27■□□□□ 0.36
PDPK1-201ENST00000268673 TOP1P11387 765 aaKnown RBP17.27■□□□□ 0.36
PDPK1-201ENST00000268673 CASQ1P31415 396 aa17.27■□□□□ 0.35
PDPK1-201ENST00000268673 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 CDKL5O76039 1030 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
PDPK1-201ENST00000268673 PDE4CQ08493 712 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 BBXQ8WY36 941 aaPredicted RBP17.26■□□□□ 0.35
PDPK1-201ENST00000268673 GOLGA6L9A6NEM1 432 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 SART3Q15020 963 aaKnown RBP17.26■□□□□ 0.35
PDPK1-201ENST00000268673 TMC6Q7Z403 805 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 TCEAL9Q9UHQ7 104 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 TRIM35Q9UPQ4 493 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
PDPK1-201ENST00000268673 TAF7Q15545 349 aaPredicted RBP17.26■□□□□ 0.35
PDPK1-201ENST00000268673 CHMLP26374 656 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 ATP8B2P98198 1209 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
PDPK1-201ENST00000268673 RIOK3O14730 519 aaKnown RBP17.25■□□□□ 0.35
PDPK1-201ENST00000268673 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 PHF8Q9UPP1 1060 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 ARHGAP29Q52LW3 1261 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 CCAR1Q8IX12 1150 aaKnown RBP17.25■□□□□ 0.35
PDPK1-201ENST00000268673 FANCAO15360 1455 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 CCDC57Q2TAC2 916 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 TXLNBQ8N3L3 684 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 ATP2B1P20020 1258 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 SYT1P21579 422 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 GABPB1Q06547 395 aaPredicted RBP17.25■□□□□ 0.35
PDPK1-201ENST00000268673 TRERF1Q96PN7 1200 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 BOLA2Q9H3K6 86 aa17.25■□□□□ 0.35
PDPK1-201ENST00000268673 BRD1O95696 1058 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
PDPK1-201ENST00000268673 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 U3KPZ7 1027 aaPredicted RBP17.24■□□□□ 0.35
PDPK1-201ENST00000268673 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 AK2P54819 239 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
PDPK1-201ENST00000268673 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
PDPK1-201ENST00000268673 DNAJC25Q9H1X3 360 aa17.23■□□□□ 0.35
PDPK1-201ENST00000268673 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
PDPK1-201ENST00000268673 NAP1L1P55209 391 aaKnown RBP17.23■□□□□ 0.35
PDPK1-201ENST00000268673 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
PDPK1-201ENST00000268673 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
PDPK1-201ENST00000268673 EPB41L2O43491 1005 aaKnown RBP17.23■□□□□ 0.35
PDPK1-201ENST00000268673 KIAA0754O94854 1291 aa17.23■□□□□ 0.35
PDPK1-201ENST00000268673 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
PDPK1-201ENST00000268673 ZNHIT6Q9NWK9 470 aaKnown RBP17.23■□□□□ 0.35
PDPK1-201ENST00000268673 POTEB2H3BUK9 544 aa17.23■□□□□ 0.35
PDPK1-201ENST00000268673 IGSF3O75054 1194 aa17.23■□□□□ 0.35
PDPK1-201ENST00000268673 KIF5CO60282 957 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
PDPK1-201ENST00000268673 TRIM22Q8IYM9 498 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 MPHOSPH8Q99549 860 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 SRRTQ9BXP5 876 aaKnown RBP17.22■□□□□ 0.35
PDPK1-201ENST00000268673 PLCH2O75038 1416 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 ZFYVE9O95405 1425 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
PDPK1-201ENST00000268673 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
PDPK1-201ENST00000268673 C8orf76Q96K31 380 aa17.21■□□□□ 0.35
PDPK1-201ENST00000268673 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
PDPK1-201ENST00000268673 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
PDPK1-201ENST00000268673 PIK3R4Q99570 1358 aa17.21■□□□□ 0.35
PDPK1-201ENST00000268673 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
PDPK1-201ENST00000268673 IQCEQ6IPM2 695 aa17.21■□□□□ 0.35
PDPK1-201ENST00000268673 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDPK1-201ENST00000268673 U2AF2P26368 475 aaKnown RBP eCLIP17.21■□□□□ 0.34
PDPK1-201ENST00000268673 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.34
PDPK1-201ENST00000268673 USHBP1Q8N6Y0 703 aa17.2■□□□□ 0.34
PDPK1-201ENST00000268673 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
PDPK1-201ENST00000268673 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
PDPK1-201ENST00000268673 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
PDPK1-201ENST00000268673 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
PDPK1-201ENST00000268673 C17orf53Q8N3J3 647 aaPredicted RBP17.19■□□□□ 0.34
PDPK1-201ENST00000268673 ERO1AQ96HE7 468 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 MAP9Q49MG5 647 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
PDPK1-201ENST00000268673 CCDC69A6NI79 296 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 TXLNAP40222 546 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDPK1-201ENST00000268673 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
PDPK1-201ENST00000268673 ARFGAP3Q9NP61 516 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms