RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
SYCP3-201ENST00000266743 NARFQ9UHQ1 456 aa13.63□□□□□ -0.23
SYCP3-201ENST00000266743 CYP19A1P11511 503 aaPredicted RBP13.62□□□□□ -0.23
SYCP3-201ENST00000266743 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
SYCP3-201ENST00000266743 ZNF831Q5JPB2 1677 aa13.62□□□□□ -0.23
SYCP3-201ENST00000266743 ADAMTS7Q9UKP4 1686 aa13.62□□□□□ -0.23
SYCP3-201ENST00000266743 KIF20BQ96Q89 1820 aa13.62□□□□□ -0.23
SYCP3-201ENST00000266743 COL15A1P39059 1388 aa13.61□□□□□ -0.23
SYCP3-201ENST00000266743 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
SYCP3-201ENST00000266743 CFAP44Q96MT7 982 aa13.61□□□□□ -0.23
SYCP3-201ENST00000266743 TAOK3Q9H2K8 898 aa13.61□□□□□ -0.23
SYCP3-201ENST00000266743 TSKSQ9UJT2 592 aa13.61□□□□□ -0.23
SYCP3-201ENST00000266743 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
SYCP3-201ENST00000266743 TJP1Q07157 1748 aa13.61□□□□□ -0.23
SYCP3-201ENST00000266743 CANXP27824 592 aaKnown RBP13.6□□□□□ -0.23
SYCP3-201ENST00000266743 FMR1Q06787 632 aaKnown RBP eCLIP13.6□□□□□ -0.23
SYCP3-201ENST00000266743 MAP1SQ66K74 1059 aaPredicted RBP13.6□□□□□ -0.23
SYCP3-201ENST00000266743 GRM1Q13255 1194 aa13.59□□□□□ -0.23
SYCP3-201ENST00000266743 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
SYCP3-201ENST00000266743 TBC1D9BQ66K14 1250 aa13.59□□□□□ -0.23
SYCP3-201ENST00000266743 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
SYCP3-201ENST00000266743 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
SYCP3-201ENST00000266743 ZNF541Q9H0D2 1346 aa13.59□□□□□ -0.23
SYCP3-201ENST00000266743 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
SYCP3-201ENST00000266743 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
SYCP3-201ENST00000266743 RGS19P49795 217 aa13.58□□□□□ -0.24
SYCP3-201ENST00000266743 AMOTQ4VCS5 1084 aa13.58□□□□□ -0.24
SYCP3-201ENST00000266743 ABT1Q9ULW3 272 aaKnown RBP13.58□□□□□ -0.24
SYCP3-201ENST00000266743 AFDNP55196 1824 aaKnown RBP13.57□□□□□ -0.24
SYCP3-201ENST00000266743 CCDC88AQ3V6T2 1871 aa13.57□□□□□ -0.24
SYCP3-201ENST00000266743 IQCA1LA6NCM1 817 aa13.57□□□□□ -0.24
SYCP3-201ENST00000266743 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
SYCP3-201ENST00000266743 OLFM4Q6UX06 510 aa13.57□□□□□ -0.24
SYCP3-201ENST00000266743 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
SYCP3-201ENST00000266743 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
SYCP3-201ENST00000266743 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
SYCP3-201ENST00000266743 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
SYCP3-201ENST00000266743 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
SYCP3-201ENST00000266743 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
SYCP3-201ENST00000266743 BRIP1Q9BX63 1249 aa13.56□□□□□ -0.24
SYCP3-201ENST00000266743 NRXN2Q9P2S2 1712 aa13.56□□□□□ -0.24
SYCP3-201ENST00000266743 EPHX2P34913 555 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 PDE6BP35913 854 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
SYCP3-201ENST00000266743 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 DCBLD2Q96PD2 775 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 SLC52A2Q9HAB3 445 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
SYCP3-201ENST00000266743 TBC1D2BQ9UPU7 963 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 ZNF330Q9Y3S2 320 aaPredicted RBP13.55□□□□□ -0.24
SYCP3-201ENST00000266743 RNF123Q5XPI4 1314 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 LTBP3Q9NS15 1303 aa13.55□□□□□ -0.24
SYCP3-201ENST00000266743 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
SYCP3-201ENST00000266743 GALR2O43603 387 aaPredicted RBP13.54□□□□□ -0.24
SYCP3-201ENST00000266743 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
SYCP3-201ENST00000266743 HACL1Q9UJ83 578 aa13.54□□□□□ -0.24
SYCP3-201ENST00000266743 CDCA8Q53HL2 280 aa13.53□□□□□ -0.24
SYCP3-201ENST00000266743 CAPNS2Q96L46 248 aa13.53□□□□□ -0.24
SYCP3-201ENST00000266743 MAP3K13O43283 966 aa13.52□□□□□ -0.25
SYCP3-201ENST00000266743 AOC2O75106 756 aa13.52□□□□□ -0.25
SYCP3-201ENST00000266743 PYGBP11216 843 aa13.52□□□□□ -0.25
SYCP3-201ENST00000266743 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
SYCP3-201ENST00000266743 CNKSR1Q969H4 720 aa13.52□□□□□ -0.25
SYCP3-201ENST00000266743 MCOLN1Q9GZU1 580 aa13.52□□□□□ -0.25
SYCP3-201ENST00000266743 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
SYCP3-201ENST00000266743 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
SYCP3-201ENST00000266743 NPHP1O15259 732 aa13.51□□□□□ -0.25
SYCP3-201ENST00000266743 RNMTO43148 476 aaKnown RBP13.51□□□□□ -0.25
SYCP3-201ENST00000266743 SRGNP10124 158 aa13.51□□□□□ -0.25
SYCP3-201ENST00000266743 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
SYCP3-201ENST00000266743 MS4A3Q96HJ5 214 aa13.51□□□□□ -0.25
SYCP3-201ENST00000266743 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
SYCP3-201ENST00000266743 DDX21Q9NR30 783 aaKnown RBP eCLIP13.51□□□□□ -0.25
SYCP3-201ENST00000266743 TRAF5O00463 557 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 AKAP4Q5JQC9 854 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 PCDHB13Q9Y5F0 798 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 ANKRD31Q8N7Z5 1873 aa13.5□□□□□ -0.25
SYCP3-201ENST00000266743 SLX4Q8IY92 1834 aa13.49□□□□□ -0.25
SYCP3-201ENST00000266743 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
SYCP3-201ENST00000266743 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYCP3-201ENST00000266743 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
SYCP3-201ENST00000266743 CST9Q5W186 159 aa13.48□□□□□ -0.25
SYCP3-201ENST00000266743 SETDB2Q96T68 719 aa13.48□□□□□ -0.25
SYCP3-201ENST00000266743 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
SYCP3-201ENST00000266743 A0A087WZG4 1122 aa13.47□□□□□ -0.25
SYCP3-201ENST00000266743 A1BGP04217 495 aa13.47□□□□□ -0.25
SYCP3-201ENST00000266743 IL13P35225 146 aa13.47□□□□□ -0.25
SYCP3-201ENST00000266743 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
SYCP3-201ENST00000266743 SOGA3Q5TF21 947 aa13.47□□□□□ -0.25
SYCP3-201ENST00000266743 PNMA8AQ86V59 439 aaPredicted RBP13.47□□□□□ -0.25
SYCP3-201ENST00000266743 GJA3Q9Y6H8 435 aa13.47□□□□□ -0.25
SYCP3-201ENST00000266743 DICER1Q9UPY3 1922 aaKnown RBP13.47□□□□□ -0.25
SYCP3-201ENST00000266743 CAMTA2O94983 1202 aa13.46□□□□□ -0.25
SYCP3-201ENST00000266743 STARD3NLO95772 234 aa13.46□□□□□ -0.25
SYCP3-201ENST00000266743 HMOX1P09601 288 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms