RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 CCDC38Q502W7 563 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
CPT1A-201ENST00000265641 CSB-PGBD3P0DP91 1061 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 AFAP1L1Q8TED9 768 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 DNAI1Q9UI46 699 aa12.36□□□□□ -0.43
CPT1A-201ENST00000265641 STK3Q13188 491 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 IGSF3O75054 1194 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-201ENST00000265641 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-201ENST00000265641 FCHSD2O94868 740 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 FERMT3Q86UX7 667 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 TAX1BP1Q86VP1 789 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 CEP57Q86XR8 500 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 CCDC114Q96M63 670 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 ALS2CR12Q96Q35 445 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 C6orf163Q5TEZ5 329 aa12.35□□□□□ -0.43
CPT1A-201ENST00000265641 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 MCM6Q14566 821 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
CPT1A-201ENST00000265641 RBBP5Q15291 538 aaKnown RBP12.34□□□□□ -0.43
CPT1A-201ENST00000265641 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 SEC24BO95487 1268 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 NUCB1Q02818 461 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 NUP133Q8WUM0 1156 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 WASF1Q92558 559 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 LMNTD2Q8IXW0 634 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 TACO1Q9BSH4 297 aaKnown RBP12.34□□□□□ -0.43
CPT1A-201ENST00000265641 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 IFFO1Q0D2I5 559 aa12.34□□□□□ -0.43
CPT1A-201ENST00000265641 RAD50Q92878 1312 aa12.33□□□□□ -0.43
CPT1A-201ENST00000265641 RAB11FIP3O75154 756 aa12.33□□□□□ -0.44
CPT1A-201ENST00000265641 GTF3C6Q969F1 213 aa12.33□□□□□ -0.44
CPT1A-201ENST00000265641 STMN4Q9H169 189 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-201ENST00000265641 USP48Q86UV5 1035 aa12.33□□□□□ -0.44
CPT1A-201ENST00000265641 EIF4G3O43432 1585 aaKnown RBP12.33□□□□□ -0.44
CPT1A-201ENST00000265641 CKAP2LQ8IYA6 745 aa12.33□□□□□ -0.44
CPT1A-201ENST00000265641 RNF168Q8IYW5 571 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-201ENST00000265641 CEP83Q9Y592 693 aa12.33□□□□□ -0.44
CPT1A-201ENST00000265641 CWC27Q6UX04 472 aaKnown RBP12.32□□□□□ -0.44
CPT1A-201ENST00000265641 SPATS2LQ9NUQ6 558 aaKnown RBP12.32□□□□□ -0.44
CPT1A-201ENST00000265641 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
CPT1A-201ENST00000265641 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 RAI14Q9P0K7 980 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 PTGS1P23219 599 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 EFCAB13Q8IY85 973 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 PLB1Q6P1J6 1458 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 KIF3CO14782 793 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 PPFIA3O75145 1194 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 TMX3Q96JJ7 454 aa12.32□□□□□ -0.44
CPT1A-201ENST00000265641 PARD3Q8TEW0 1356 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
CPT1A-201ENST00000265641 BRD3Q15059 726 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
CPT1A-201ENST00000265641 ANKRD18BA2A2Z9 1011 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 SLC8A1P32418 973 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 TYRO3Q06418 890 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 FAM114A1Q8IWE2 563 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 NEUROD6Q96NK8 337 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 SEPT6Q14141 434 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 SH2D4BQ5SQS7 431 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 SHANK2Q9UPX8 1470 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 NSD3Q9BZ95 1437 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
CPT1A-201ENST00000265641 EVCP57679 992 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 KANK3Q6NY19 840 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 DDX12PQ92771 950 aa12.31□□□□□ -0.44
CPT1A-201ENST00000265641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.31□□□□□ -0.44
CPT1A-201ENST00000265641 TEX2Q8IWB9 1127 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 MPHOSPH8Q99549 860 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 MAP4K4O95819 1239 aaPredicted RBP12.3□□□□□ -0.44
CPT1A-201ENST00000265641 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 PYM1Q9BRP8 204 aaKnown RBP12.3□□□□□ -0.44
CPT1A-201ENST00000265641 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 SRGAP3O43295 1099 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 OAS2P29728 719 aaKnown RBP12.3□□□□□ -0.44
CPT1A-201ENST00000265641 LACTBP83111 547 aaPredicted RBP12.3□□□□□ -0.44
CPT1A-201ENST00000265641 ICE2Q659A1 982 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 IL16Q14005 1332 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 ERCC3P19447 782 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 IFT74Q96LB3 600 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
CPT1A-201ENST00000265641 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
CPT1A-201ENST00000265641 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms