RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GUCY1B3Q02153 619 aa16.38■□□□□ 0.21
CDH3-201ENST00000264012 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
CDH3-201ENST00000264012 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 MAP3K19Q56UN5 1328 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 CBFA2T2O43439 604 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 C19orf44Q9H6X5 657 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 CEP131Q9UPN4 1083 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
CDH3-201ENST00000264012 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 IQCA1Q86XH1 822 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
CDH3-201ENST00000264012 CDC5LQ99459 802 aaKnown RBP16.37■□□□□ 0.21
CDH3-201ENST00000264012 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
CDH3-201ENST00000264012 GOLGA8BA8MQT2 603 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDH3-201ENST00000264012 CABLES1Q8TDN4 633 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 SLC12A7Q9Y666 1083 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 ATP7AQ04656 1500 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 GCP02774 474 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 CCT2P78371 535 aaKnown RBP16.36■□□□□ 0.21
CDH3-201ENST00000264012 HSP90B2PQ58FF3 399 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 CTCFLQ8NI51 663 aaPredicted RBP16.36■□□□□ 0.21
CDH3-201ENST00000264012 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 ESPNB1AK53 854 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 TTF1Q15361 905 aaPredicted RBP16.36■□□□□ 0.21
CDH3-201ENST00000264012 ODF2Q5BJF6 829 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
CDH3-201ENST00000264012 IFIT3O14879 490 aaKnown RBP16.36■□□□□ 0.21
CDH3-201ENST00000264012 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
CDH3-201ENST00000264012 BMP2KQ9NSY1 1161 aaPredicted RBP16.35■□□□□ 0.21
CDH3-201ENST00000264012 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
CDH3-201ENST00000264012 SAMD9Q5K651 1589 aa16.35■□□□□ 0.21
CDH3-201ENST00000264012 DDX46Q7L014 1031 aaKnown RBP16.35■□□□□ 0.21
CDH3-201ENST00000264012 HMG20BQ9P0W2 317 aa16.35■□□□□ 0.21
CDH3-201ENST00000264012 TRPM2O94759 1503 aa16.35■□□□□ 0.21
CDH3-201ENST00000264012 SMTNL1A8MU46 457 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
CDH3-201ENST00000264012 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 GJB2P29033 226 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
CDH3-201ENST00000264012 ZBTB40Q9NUA8 1239 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 STX6O43752 255 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 HOXC9P31274 260 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 ZFYVE27Q5T4F4 411 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 C16orf71Q8IYS4 520 aaPredicted RBP16.34■□□□□ 0.21
CDH3-201ENST00000264012 GOLGA8AA7E2F4 631 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 HAND2P61296 217 aa16.34■□□□□ 0.21
CDH3-201ENST00000264012 NFATC2IPQ8NCF5 419 aa16.33■□□□□ 0.21
CDH3-201ENST00000264012 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.21
CDH3-201ENST00000264012 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.21
CDH3-201ENST00000264012 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
CDH3-201ENST00000264012 AK7Q96M32 723 aa16.33■□□□□ 0.2
CDH3-201ENST00000264012 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
CDH3-201ENST00000264012 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
CDH3-201ENST00000264012 ESYT1Q9BSJ8 1104 aa16.32■□□□□ 0.2
CDH3-201ENST00000264012 SEC63Q9UGP8 760 aaKnown RBP16.32■□□□□ 0.2
CDH3-201ENST00000264012 TMEM132AQ24JP5 1023 aa16.32■□□□□ 0.2
CDH3-201ENST00000264012 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
CDH3-201ENST00000264012 C8orf34Q49A92 452 aa16.32■□□□□ 0.2
CDH3-201ENST00000264012 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
CDH3-201ENST00000264012 IP6K1Q92551 441 aa16.32■□□□□ 0.2
CDH3-201ENST00000264012 USP16Q9Y5T5 823 aa16.32■□□□□ 0.2
CDH3-201ENST00000264012 BAG4O95429 457 aaKnown RBP16.31■□□□□ 0.2
CDH3-201ENST00000264012 TMX3Q96JJ7 454 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 TFIP11Q9UBB9 837 aaKnown RBP16.31■□□□□ 0.2
CDH3-201ENST00000264012 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 ANO10Q9NW15 660 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 ZNF76P36508 570 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 CFAP100Q494V2 611 aa16.31■□□□□ 0.2
CDH3-201ENST00000264012 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
CDH3-201ENST00000264012 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
CDH3-201ENST00000264012 ATP10AO60312 1499 aa16.3■□□□□ 0.2
CDH3-201ENST00000264012 SSRP1Q08945 709 aaKnown RBP16.3■□□□□ 0.2
CDH3-201ENST00000264012 SYCP1Q15431 976 aa16.3■□□□□ 0.2
CDH3-201ENST00000264012 IL2RBP14784 551 aa16.3■□□□□ 0.2
CDH3-201ENST00000264012 IL13P35225 146 aa16.3■□□□□ 0.2
CDH3-201ENST00000264012 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 CDR1P51861 262 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
CDH3-201ENST00000264012 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
CDH3-201ENST00000264012 LUC7LQ9NQ29 371 aaKnown RBP16.29■□□□□ 0.2
CDH3-201ENST00000264012 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 IL15P40933 162 aaPredicted RBP16.29■□□□□ 0.2
CDH3-201ENST00000264012 CCDC152Q4G0S7 254 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 CATIPQ7Z7H3 387 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 NCOA7Q8NI08 942 aa16.29■□□□□ 0.2
CDH3-201ENST00000264012 ERCC4Q92889 916 aaPredicted RBP16.29■□□□□ 0.2
CDH3-201ENST00000264012 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
CDH3-201ENST00000264012 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms