RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TTC41PQ6P2S7 1318 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 MAP3K5Q99683 1374 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 GLRX3O76003 335 aaKnown RBP14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 POLA2Q14181 598 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 TPD52L1Q16890 204 aaPredicted RBP14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 CBX8Q9HC52 389 aa14.7□□□□□ -0.06
CHMP2B-201ENST00000263780 C16orf45Q96MC5 204 aaPredicted RBP14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 JAKMIP1Q96N16 626 aaKnown RBP14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 USP44Q9H0E7 712 aa14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 BABAM1Q9NWV8 329 aa14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 CCDC66A2RUB6 948 aa14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 PSMA5P28066 241 aa14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 ANKRD1Q15327 319 aa14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 LUZP1Q86V48 1076 aa14.69□□□□□ -0.06
CHMP2B-201ENST00000263780 NPHP3Q7Z494 1330 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 A0A0U1RQG5 324 aaPredicted RBP14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 RBM43Q6ZSC3 357 aaKnown RBP14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 CHMP4AQ9BY43 222 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 C3P01024 1663 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 MTHFSDQ2M296 383 aaKnown RBP14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 ANO6Q4KMQ2 910 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 TTC6Q86TZ1 520 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 CREBRFQ8IUR6 639 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 CLSTN2Q9H4D0 955 aa14.68□□□□□ -0.06
CHMP2B-201ENST00000263780 SPATA31D1Q6ZQQ2 1576 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 CEP135Q66GS9 1140 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 PPP1R42Q7Z4L9 355 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 KRT222Q8N1A0 295 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 ZNF397Q8NF99 534 aaPredicted RBP14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 GPATCH3Q96I76 525 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 LARGE1O95461 756 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 TTC21AQ8NDW8 1320 aa14.67□□□□□ -0.06
CHMP2B-201ENST00000263780 LIG1P18858 919 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 RNF20Q5VTR2 975 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 KIF18AQ8NI77 898 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 SPATA32Q96LK8 384 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 DACT1Q9NYF0 836 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 SPG7Q9UQ90 795 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 HIP1O00291 1037 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 ZNF165P49910 485 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 CAMK4Q16566 473 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 HSP90AB2PQ58FF8 381 aa14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 FBXO31Q5XUX0 539 aaPredicted RBP14.66□□□□□ -0.06
CHMP2B-201ENST00000263780 KIF2AO00139 706 aaPredicted RBP14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 PRPF40BQ6NWY9 871 aaKnown RBP14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 AKAP12Q02952 1782 aa14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 GOLGA6L19H0YKK7 550 aa14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 LRMPQ12912 555 aa14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 ME3Q16798 604 aa14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 SARM1Q6SZW1 724 aa14.65□□□□□ -0.06
CHMP2B-201ENST00000263780 ITSN1Q15811 1721 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 XRN1Q8IZH2 1706 aaKnown RBP14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 OVOS2A0A0J9YW53 1432 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 OVOS2Q6IE36 1432 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 SRGAP3O43295 1099 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 RBM6P78332 1123 aaKnown RBP14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 CKAP2LQ8IYA6 745 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 RGPD1P0DJD0 1748 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 USP31Q70CQ4 1352 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 MAP3K19Q56UN5 1328 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 SLFN14P0C7P3 912 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 SLFNL1Q499Z3 407 aa14.64□□□□□ -0.07
CHMP2B-201ENST00000263780 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 FOXO3O43524 673 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 CPA1P15085 419 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 PTPN14Q15678 1187 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 CLASRPQ8N2M8 674 aaKnown RBP14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 ERO1AQ96HE7 468 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 MRFAP1L1Q96HT8 127 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 CHMP3Q9Y3E7 222 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 KDRP35968 1356 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 CACNA1FO60840 1977 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 CTAGE5O15320 804 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 KCNJ4P48050 445 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 TERF2Q15554 542 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 TXNDC2Q86VQ3 553 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 CACTINQ8WUQ7 758 aaKnown RBP14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 EVI5LQ96CN4 794 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
CHMP2B-201ENST00000263780 GNAT3A8MTJ3 354 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 FGD1P98174 961 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 LRRC8AQ8IWT6 810 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 LEO1Q8WVC0 666 aaPredicted RBP14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 PTH1RQ03431 593 aa14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 OS9Q13438 667 aaPredicted RBP14.62□□□□□ -0.07
CHMP2B-201ENST00000263780 ADCK5Q3MIX3 580 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms