RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CAMTA2O94983 1202 aa23.6■■□□□ 1.37
SDF4-201ENST00000263741 PHAXQ9H814 394 aaKnown RBP23.6■■□□□ 1.37
SDF4-201ENST00000263741 LRP5O75197 1615 aa23.59■■□□□ 1.37
SDF4-201ENST00000263741 SLC16A10Q8TF71 515 aa23.59■■□□□ 1.37
SDF4-201ENST00000263741 ZBTB3Q9H5J0 574 aa23.59■■□□□ 1.37
SDF4-201ENST00000263741 AFDNP55196 1824 aaKnown RBP23.59■■□□□ 1.37
SDF4-201ENST00000263741 COPS6Q7L5N1 327 aa23.58■■□□□ 1.37
SDF4-201ENST00000263741 STK31Q9BXU1 1019 aa23.57■■□□□ 1.36
SDF4-201ENST00000263741 PTGER2P43116 358 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 KIF6Q6ZMV9 814 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 G2E3Q7L622 706 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 BCL2L13Q9BXK5 485 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 SPON1Q9HCB6 807 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 HLFQ16534 295 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 BICDL1Q6ZP65 573 aa23.56■■□□□ 1.36
SDF4-201ENST00000263741 HYPKQ9NX55 129 aa23.55■■□□□ 1.36
SDF4-201ENST00000263741 MAP3K15Q6ZN16 1313 aa23.55■■□□□ 1.36
SDF4-201ENST00000263741 SLC4A2P04920 1241 aa23.55■■□□□ 1.36
SDF4-201ENST00000263741 SGIP1Q9BQI5 828 aa23.55■■□□□ 1.36
SDF4-201ENST00000263741 MMP10P09238 476 aa23.54■■□□□ 1.36
SDF4-201ENST00000263741 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
SDF4-201ENST00000263741 DDR1Q08345 913 aa23.52■■□□□ 1.36
SDF4-201ENST00000263741 NFIXQ14938 502 aa23.52■■□□□ 1.35
SDF4-201ENST00000263741 NLGN1Q8N2Q7 840 aa23.52■■□□□ 1.35
SDF4-201ENST00000263741 SSH1Q8WYL5 1049 aa23.52■■□□□ 1.35
SDF4-201ENST00000263741 ZNF428Q96B54 188 aa23.51■■□□□ 1.35
SDF4-201ENST00000263741 POLD1P28340 1107 aa23.5■■□□□ 1.35
SDF4-201ENST00000263741 NRXN2Q9P2S2 1712 aa23.49■■□□□ 1.35
SDF4-201ENST00000263741 GPTP24298 496 aa23.49■■□□□ 1.35
SDF4-201ENST00000263741 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
SDF4-201ENST00000263741 FLIIQ13045 1269 aa23.48■■□□□ 1.35
SDF4-201ENST00000263741 ZNF652Q9Y2D9 606 aa23.48■■□□□ 1.35
SDF4-201ENST00000263741 ADCY9O60503 1353 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 ERVV-1B6SEH8 477 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 TM4SF1P30408 202 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 KLHL34Q8N239 644 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 SMC4Q9NTJ3 1288 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 POLRMTO00411 1230 aaKnown RBP23.47■■□□□ 1.35
SDF4-201ENST00000263741 GIGYF2Q6Y7W6 1299 aaKnown RBP23.47■■□□□ 1.35
SDF4-201ENST00000263741 MRPL50Q8N5N7 158 aaKnown RBP23.47■■□□□ 1.35
SDF4-201ENST00000263741 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
SDF4-201ENST00000263741 NIP7Q9Y221 180 aaKnown RBP eCLIP23.47■■□□□ 1.352e-9■□□□□ 9.6
SDF4-201ENST00000263741 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
SDF4-201ENST00000263741 ANKRD31Q8N7Z5 1873 aa23.46■■□□□ 1.35
SDF4-201ENST00000263741 FKBP5Q13451 457 aaPredicted RBP23.46■■□□□ 1.35
SDF4-201ENST00000263741 KIF13BQ9NQT8 1826 aa23.46■■□□□ 1.35
SDF4-201ENST00000263741 UBN2Q6ZU65 1347 aa23.46■■□□□ 1.35
SDF4-201ENST00000263741 CLEC4GQ6UXB4 293 aa23.45■■□□□ 1.35
SDF4-201ENST00000263741 RIC3Q7Z5B4 369 aa23.45■■□□□ 1.35
SDF4-201ENST00000263741 PPP1R1BQ9UD71 204 aaPredicted RBP23.45■■□□□ 1.35
SDF4-201ENST00000263741 PARP3Q9Y6F1 533 aa23.45■■□□□ 1.34
SDF4-201ENST00000263741 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.34
SDF4-201ENST00000263741 PI4KAP2A4QPH2 592 aa23.44■■□□□ 1.34
SDF4-201ENST00000263741 CT47B1P0C2W7 299 aaPredicted RBP23.44■■□□□ 1.34
SDF4-201ENST00000263741 RARSP54136 660 aaKnown RBP23.44■■□□□ 1.34
SDF4-201ENST00000263741 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
SDF4-201ENST00000263741 PI4KAP1Q8N8J0 262 aa23.44■■□□□ 1.34
SDF4-201ENST00000263741 SETDB2Q96T68 719 aa23.44■■□□□ 1.34
SDF4-201ENST00000263741 MAP3K2Q9Y2U5 619 aa23.44■■□□□ 1.34
SDF4-201ENST00000263741 N4BP2Q86UW6 1770 aaPredicted RBP23.44■■□□□ 1.34
SDF4-201ENST00000263741 F6X3S4 739 aa23.43■■□□□ 1.34
SDF4-201ENST00000263741 ATP5J2-PTCD1G3V325 749 aa23.43■■□□□ 1.34
SDF4-201ENST00000263741 BCAR3O75815 825 aa23.42■■□□□ 1.34
SDF4-201ENST00000263741 DDX58O95786 925 aaKnown RBP23.42■■□□□ 1.34
SDF4-201ENST00000263741 SERPINB2P05120 415 aa23.42■■□□□ 1.34
SDF4-201ENST00000263741 ALDH1L2Q3SY69 923 aa23.42■■□□□ 1.34
SDF4-201ENST00000263741 MYD88Q99836 296 aa23.42■■□□□ 1.34
SDF4-201ENST00000263741 GOLGB1Q14789 3259 aaKnown RBP23.42■■□□□ 1.34
SDF4-201ENST00000263741 KIAA1551Q9HCM1 1747 aa23.42■■□□□ 1.34
SDF4-201ENST00000263741 KSR2Q6VAB6 950 aa23.41■■□□□ 1.34
SDF4-201ENST00000263741 TNRC6CQ9HCJ0 1690 aaKnown RBP23.41■■□□□ 1.34
SDF4-201ENST00000263741 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
SDF4-201ENST00000263741 COL11A2P13942 1736 aaPredicted RBP23.4■■□□□ 1.34
SDF4-201ENST00000263741 TCIRG1Q13488 830 aa23.4■■□□□ 1.34
SDF4-201ENST00000263741 C10orf71Q711Q0 1435 aa23.39■■□□□ 1.34
SDF4-201ENST00000263741 RGL2O15211 777 aa23.39■■□□□ 1.34
SDF4-201ENST00000263741 FHDC1Q9C0D6 1143 aaPredicted RBP23.39■■□□□ 1.34
SDF4-201ENST00000263741 SUSD4Q5VX71 490 aa23.39■■□□□ 1.33
SDF4-201ENST00000263741 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
SDF4-201ENST00000263741 NBPF5PQ86XG9 351 aaPredicted RBP23.38■■□□□ 1.33
SDF4-201ENST00000263741 CACNA1SQ13698 1873 aa23.38■■□□□ 1.33
SDF4-201ENST00000263741 LAMB2P55268 1798 aa23.38■■□□□ 1.33
SDF4-201ENST00000263741 HSP90AB3PQ58FF7 597 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 NUTM1Q86Y26 1132 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 METTL22Q9BUU2 404 aaPredicted RBP23.37■■□□□ 1.33
SDF4-201ENST00000263741 DDX60Q8IY21 1712 aaKnown RBP23.37■■□□□ 1.33
SDF4-201ENST00000263741 NPHP1O15259 732 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 NLRP10Q86W26 655 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 CNBD1Q8NA66 436 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 ISCA1Q9BUE6 129 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 NOB1Q9ULX3 412 aaKnown RBP23.37■■□□□ 1.33
SDF4-201ENST00000263741 ABCC12Q96J65 1359 aa23.37■■□□□ 1.33
SDF4-201ENST00000263741 CWF19L2Q2TBE0 894 aaKnown RBP23.36■■□□□ 1.33
SDF4-201ENST00000263741 DNAAF4Q8WXU2 420 aa23.36■■□□□ 1.33
SDF4-201ENST00000263741 IGKV5-2P06315 115 aa23.35■■□□□ 1.33
SDF4-201ENST00000263741 NLGN2Q8NFZ4 835 aa23.35■■□□□ 1.33
SDF4-201ENST00000263741 NTSR2O95665 410 aa23.34■■□□□ 1.33
SDF4-201ENST00000263741 RTL5Q5HYW3 569 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms