RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TRIM27P14373 513 aa14.17□□□□□ -0.14
SPG11-201ENST00000261866 TOM1O60784 492 aa14.17□□□□□ -0.14
SPG11-201ENST00000261866 NIP7Q9Y221 180 aaKnown RBP eCLIP14.17□□□□□ -0.14
SPG11-201ENST00000261866 XAGE3Q8WTP9 111 aa14.17□□□□□ -0.14
SPG11-201ENST00000261866 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 HELBQ8NG08 1087 aaPredicted RBP14.16□□□□□ -0.14
SPG11-201ENST00000261866 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 KAT6BQ8WYB5 2073 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 BIN1O00499 593 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 CATIPQ7Z7H3 387 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 PODXL2Q9NZ53 605 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 CEP131Q9UPN4 1083 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 PLS1Q14651 629 aa14.16□□□□□ -0.14
SPG11-201ENST00000261866 DDB1Q16531 1140 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 SNRPA1P09661 255 aaKnown RBP14.15□□□□□ -0.14
SPG11-201ENST00000261866 COPS6Q7L5N1 327 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 KAT14Q9H8E8 782 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 TFIP11Q9UBB9 837 aaKnown RBP14.15□□□□□ -0.14
SPG11-201ENST00000261866 STX8Q9UNK0 236 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 CKAP2LQ8IYA6 745 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
SPG11-201ENST00000261866 SIRT1Q96EB6 747 aa14.15□□□□□ -0.14
SPG11-201ENST00000261866 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 MACROD2A1Z1Q3 448 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 MYO1BO43795 1136 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 ERLIN2O94905 339 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 USP8P40818 1118 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPG11-201ENST00000261866 NFATC2IPQ8NCF5 419 aa14.14□□□□□ -0.15
SPG11-201ENST00000261866 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPG11-201ENST00000261866 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 SLF2Q8IX21 1173 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 CCDC24Q8N4L8 307 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 SBNO2Q9Y2G9 1366 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 CBFA2T2O43439 604 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 PA2G4Q9UQ80 394 aaKnown RBP14.13□□□□□ -0.15
SPG11-201ENST00000261866 CYP7A1P22680 504 aa14.13□□□□□ -0.15
SPG11-201ENST00000261866 MFSD6Q6ZSS7 791 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 ERCC4Q92889 916 aaPredicted RBP14.12□□□□□ -0.15
SPG11-201ENST00000261866 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 EPB41L2O43491 1005 aaKnown RBP14.12□□□□□ -0.15
SPG11-201ENST00000261866 PUS7Q96PZ0 661 aaKnown RBP14.12□□□□□ -0.15
SPG11-201ENST00000261866 PUF60Q9UHX1 559 aaKnown RBP14.12□□□□□ -0.15
SPG11-201ENST00000261866 HLA-DOAP06340 250 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 ALDH1L2Q3SY69 923 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 CTNNBL1Q8WYA6 563 aaPredicted RBP14.12□□□□□ -0.15
SPG11-201ENST00000261866 LUC7LQ9NQ29 371 aaKnown RBP14.12□□□□□ -0.15
SPG11-201ENST00000261866 TSPY3P0CV98 308 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 TSPY8P0CW00 308 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 IDEP14735 1019 aa14.12□□□□□ -0.15
SPG11-201ENST00000261866 USP16Q9Y5T5 823 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 CACNA2D4Q7Z3S7 1137 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
SPG11-201ENST00000261866 SLC4A4Q9Y6R1 1079 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 BAG3O95817 575 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 TCERG1LQ5VWI1 586 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 CCP110O43303 1012 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 GJB2P29033 226 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 MAP3K11Q16584 847 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 TMEM266Q2M3C6 531 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 GJA3Q9Y6H8 435 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 MIGA1Q8NAN2 632 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 GRPEL1Q9HAV7 217 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 TSG101Q99816 390 aa14.11□□□□□ -0.15
SPG11-201ENST00000261866 GOLGA6L10A6NI86 522 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
SPG11-201ENST00000261866 DZIP3Q86Y13 1208 aaKnown RBP14.1□□□□□ -0.15
SPG11-201ENST00000261866 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
SPG11-201ENST00000261866 KRT24Q2M2I5 525 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 NECAB1Q8N987 351 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 SERPINA10Q9UK55 444 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 SSFA2P28290 1259 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 PDE4BQ07343 736 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 CHST3Q7LGC8 479 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 CCDC113Q9H0I3 377 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 BTG4Q9NY30 223 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 ZNF408Q9H9D4 720 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 LMTK3Q96Q04 1460 aa14.1□□□□□ -0.15
SPG11-201ENST00000261866 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 HSP90AA4PQ58FG1 418 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 EVI5LQ96CN4 794 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 MEIS3Q99687 375 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 TEX13AQ9BXU3 409 aaPredicted RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 DESP17661 470 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 C16orf71Q8IYS4 520 aaPredicted RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 CNNM3Q8NE01 707 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 RNF41Q9H4P4 317 aaPredicted RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 BICD1Q96G01 975 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 METAP2P50579 478 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPG11-201ENST00000261866 CCDC178Q5BJE1 867 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 TAF4BQ92750 862 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms