RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 MKRN1Q9UHC7 482 aaKnown RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 CTCFLQ8NI51 663 aaPredicted RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 PRPF40BQ6NWY9 871 aaKnown RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 PTPRGP23470 1445 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 ZNF644Q9H582 1327 aaPredicted RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
HERC2-201ENST00000261609 SIL1Q9H173 461 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 SRGAP3O43295 1099 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 GPRASP1Q5JY77 1395 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 C6orf163Q5TEZ5 329 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 CEP83Q9Y592 693 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
HERC2-201ENST00000261609 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 KIF6Q6ZMV9 814 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 JADE2Q9NQC1 790 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 PPP1R12BO60237 982 aaPredicted RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 IKQ13123 557 aaPredicted RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 TAOK3Q9H2K8 898 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 DESP17661 470 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 ZSCAN26Q16670 478 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 SOGA3Q5TF21 947 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 POTEDQ86YR6 584 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 TMPOP42166 694 aaKnown RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 KIF1BPQ96EK5 621 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 SYTL4Q96C24 671 aaPredicted RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 GLRX3O76003 335 aaKnown RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 TSC1Q92574 1164 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 TSG101Q99816 390 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 POTEJP0CG39 1038 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 CETN2P41208 172 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 TYRO3Q06418 890 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 WWC2Q6AWC2 1192 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 CPLX4Q7Z7G2 160 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 ERICH3Q5RHP9 1530 aa8.23□□□□□ -1.09
HERC2-201ENST00000261609 ZFYP08048 801 aaPredicted RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 DDX54Q8TDD1 881 aaKnown RBP8.23□□□□□ -1.09
HERC2-201ENST00000261609 SYT10Q6XYQ8 523 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 SMC5Q8IY18 1101 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 PUF60Q9UHX1 559 aaKnown RBP8.22□□□□□ -1.09
HERC2-201ENST00000261609 PPP2R3AQ06190 1150 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 HOOK3Q86VS8 718 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 SERPINA10Q9UK55 444 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 CNPY2Q9Y2B0 182 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 STAMBPO95630 424 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 ISM2Q6H9L7 571 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 C8orf76Q96K31 380 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 BUB1BO60566 1050 aaPredicted RBP8.22□□□□□ -1.09
HERC2-201ENST00000261609 CTNNBL1Q8WYA6 563 aaPredicted RBP8.22□□□□□ -1.09
HERC2-201ENST00000261609 FAM160A1Q05DH4 1040 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 RBBP5Q15291 538 aaKnown RBP8.22□□□□□ -1.09
HERC2-201ENST00000261609 ATP11AP98196 1134 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 AFAP1L1Q8TED9 768 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 CCDC129Q6ZRS4 1044 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 A6NNZ2 444 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 LACTBP83111 547 aaPredicted RBP8.22□□□□□ -1.09
HERC2-201ENST00000261609 TUBB8Q3ZCM7 444 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 CNNM3Q8NE01 707 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 LMNTD2Q8IXW0 634 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 CNNM1Q9NRU3 951 aa8.22□□□□□ -1.09
HERC2-201ENST00000261609 SSBP05455 408 aaKnown RBP eCLIP8.21□□□□□ -1.09
HERC2-201ENST00000261609 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.09
HERC2-201ENST00000261609 C8orf34Q49A92 452 aa8.21□□□□□ -1.09
HERC2-201ENST00000261609 TMX3Q96JJ7 454 aa8.21□□□□□ -1.09
HERC2-201ENST00000261609 NSRP1Q9H0G5 558 aaKnown RBP8.21□□□□□ -1.09
HERC2-201ENST00000261609 PIBF1Q8WXW3 757 aa8.21□□□□□ -1.09
HERC2-201ENST00000261609 ELF2Q15723 593 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 SUPT6HQ7KZ85 1726 aaKnown RBP8.21□□□□□ -1.1
HERC2-201ENST00000261609 EFCC1Q9HA90 598 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 IGF1RP08069 1367 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 ABCC11Q96J66 1382 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 IL1RAPL2Q9NP60 686 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 RHOXF2BP0C7M4 288 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.1
HERC2-201ENST00000261609 RHOXF2Q9BQY4 288 aa8.21□□□□□ -1.1
HERC2-201ENST00000261609 FKBP4Q02790 459 aaKnown RBP eCLIP8.21□□□□□ -1.1
HERC2-201ENST00000261609 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.1
HERC2-201ENST00000261609 ZSCAN22P10073 491 aaPredicted RBP8.2□□□□□ -1.1
HERC2-201ENST00000261609 ZBTB16Q05516 673 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 GCKP35557 465 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 NUCB1Q02818 461 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 CCDC102BQ68D86 513 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 SSH1Q8WYL5 1049 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 A0A1W2PRG0 241 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 FSD2A1L4K1 749 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 GJB2P29033 226 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 NLRP6P59044 892 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 GUCY1B3Q02153 619 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 FAM114A1Q8IWE2 563 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 SLC12A5Q9H2X9 1139 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 CCDC196A0A1B0GTZ2 297 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 SUDS3Q9H7L9 328 aaPredicted RBP8.2□□□□□ -1.1
HERC2-201ENST00000261609 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.13e-7■■□□□ 14.4
HERC2-201ENST00000261609 SULT6B1Q6IMI4 303 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 MRVI1Q9Y6F6 885 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 NFE2L2Q16236 605 aa8.2□□□□□ -1.1
HERC2-201ENST00000261609 TMEM132EQ6IEE7 984 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms