RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 IL25Q9H293 177 aa8.55□□□□□ -1.04
CSDE1-201ENST00000261443 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
CSDE1-201ENST00000261443 PTPRCP08575 1304 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 EPB41L2O43491 1005 aaKnown RBP8.54□□□□□ -1.04
CSDE1-201ENST00000261443 CDC25BP30305 580 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 SLC4A10Q6U841 1118 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 KIAA0232Q92628 1395 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 H2AFXP16104 143 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-201ENST00000261443 ERCC6LQ2NKX8 1250 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-201ENST00000261443 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 EFCC1Q9HA90 598 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 POLKQ9UBT6 870 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 TUBGCP6Q96RT7 1819 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 ERBB3P21860 1342 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 POLR3GO15318 223 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-201ENST00000261443 LARGE1O95461 756 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 PNMA6AP0CW24 399 aaPredicted RBP8.54□□□□□ -1.04
CSDE1-201ENST00000261443 TXLNBQ8N3L3 684 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 NEK11Q8NG66 645 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 RASSF4Q9H2L5 321 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 DIP2BQ9P265 1576 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 RSPH14Q9UHP6 348 aa8.54□□□□□ -1.04
CSDE1-201ENST00000261443 RPGRIP1LQ68CZ1 1315 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-201ENST00000261443 CLCN6P51797 869 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 TPM4P67936 248 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 ZFP91Q96JP5 570 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-201ENST00000261443 ALKQ9UM73 1620 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 KIF2AO00139 706 aaPredicted RBP8.53□□□□□ -1.04
CSDE1-201ENST00000261443 CPA1P15085 419 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 CASTP20810 708 aaKnown RBP8.53□□□□□ -1.04
CSDE1-201ENST00000261443 PLA2G4AP47712 749 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 KRBA2Q6ZNG9 492 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 CCAR2Q8N163 923 aaKnown RBP8.53□□□□□ -1.04
CSDE1-201ENST00000261443 ZBTB9Q96C00 473 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 DDX19AQ9NUU7 478 aaKnown RBP8.53□□□□□ -1.04
CSDE1-201ENST00000261443 STK26Q9P289 416 aa8.53□□□□□ -1.04
CSDE1-201ENST00000261443 CCDC69A6NI79 296 aa8.52□□□□□ -1.04
CSDE1-201ENST00000261443 GNAI2P04899 355 aa8.52□□□□□ -1.04
CSDE1-201ENST00000261443 FERMT3Q86UX7 667 aa8.52□□□□□ -1.04
CSDE1-201ENST00000261443 RASEFQ8IZ41 740 aa8.52□□□□□ -1.04
CSDE1-201ENST00000261443 STAP2Q9UGK3 403 aa8.52□□□□□ -1.04
CSDE1-201ENST00000261443 DLG5Q8TDM6 1919 aa8.52□□□□□ -1.04
CSDE1-201ENST00000261443 ELP1O95163 1332 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 SLC4A2P04920 1241 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 FAM173BQ6P4H8 233 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 FILIP1Q7Z7B0 1213 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.52□□□□□ -1.05
CSDE1-201ENST00000261443 CLSTN2Q9H4D0 955 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 HYPKQ9NX55 129 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 CPSF1Q10570 1443 aaKnown RBP8.52□□□□□ -1.05
CSDE1-201ENST00000261443 MAP4K4O95819 1239 aaPredicted RBP8.52□□□□□ -1.05
CSDE1-201ENST00000261443 ARHGAP29Q52LW3 1261 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 MUM1L1Q5H9M0 696 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 LARP1BQ659C4 914 aaKnown RBP8.52□□□□□ -1.05
CSDE1-201ENST00000261443 TMCO3Q6UWJ1 677 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 SYT10Q6XYQ8 523 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 RGS22Q8NE09 1264 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 KIF20BQ96Q89 1820 aa8.52□□□□□ -1.05
CSDE1-201ENST00000261443 CCZ1BP86790 482 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 CCZ1P86791 482 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 SNW1Q13573 536 aaKnown RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 RBM43Q6ZSC3 357 aaKnown RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 MRFAP1L1Q96HT8 127 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 SPATA32Q96LK8 384 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 ZSCAN31Q96LW9 406 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 SCAND2PQ9GZW5 306 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 ARGLU1Q9NWB6 273 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 LRRFIP2Q9Y608 721 aaKnown RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 MINK1Q8N4C8 1332 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 F6X3S4 739 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 SGSM2O43147 1006 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 CAVIN2O95810 425 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 IL13P35225 146 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 CCT4P50991 539 aaKnown RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 GPS2Q13227 327 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 SARM1Q6SZW1 724 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 C10orf67Q8IYJ2 551 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 SH2B1Q9NRF2 756 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 PDRG1Q9NUG6 133 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 TFIP11Q9UBB9 837 aaKnown RBP8.51□□□□□ -1.05
CSDE1-201ENST00000261443 USP16Q9Y5T5 823 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 NPHP3Q7Z494 1330 aa8.51□□□□□ -1.05
CSDE1-201ENST00000261443 NR1I2O75469 434 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 CDC37L1Q7L3B6 337 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 LRRN4CLQ8ND94 238 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 BICD2Q8TD16 824 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 L2HGDHQ9H9P8 463 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 PNMA6EA0A0J9YXQ4 647 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 ST5P78524 1137 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 TEX2Q8IWB9 1127 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 NECAB1Q8N987 351 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 LSG1Q9H089 658 aaKnown RBP8.5□□□□□ -1.05
CSDE1-201ENST00000261443 EMILIN1Q9Y6C2 1016 aa8.5□□□□□ -1.05
CSDE1-201ENST00000261443 TTC21AQ8NDW8 1320 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms