RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CASTP20810 708 aaKnown RBP18.91■□□□□ 0.62
RFX1-201ENST00000254325 ANAPC15P60006 121 aa18.91■□□□□ 0.62
RFX1-201ENST00000254325 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
RFX1-201ENST00000254325 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
RFX1-201ENST00000254325 C1orf167Q5SNV9 1468 aa18.91■□□□□ 0.62
RFX1-201ENST00000254325 AOX1Q06278 1338 aa18.91■□□□□ 0.62
RFX1-201ENST00000254325 UNC5CLQ8IV45 518 aa18.91■□□□□ 0.62
RFX1-201ENST00000254325 TTC41PQ6P2S7 1318 aa18.9■□□□□ 0.62
RFX1-201ENST00000254325 LARP6Q9BRS8 491 aaKnown RBP18.9■□□□□ 0.62
RFX1-201ENST00000254325 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.9■□□□□ 0.62
RFX1-201ENST00000254325 CEMIPQ8WUJ3 1361 aa18.9■□□□□ 0.62
RFX1-201ENST00000254325 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
RFX1-201ENST00000254325 KIF2CQ99661 725 aa18.9■□□□□ 0.62
RFX1-201ENST00000254325 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
RFX1-201ENST00000254325 USP16Q9Y5T5 823 aa18.9■□□□□ 0.62
RFX1-201ENST00000254325 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.62
RFX1-201ENST00000254325 KLHDC4Q8TBB5 520 aa18.89■□□□□ 0.61
RFX1-201ENST00000254325 PIK3C2AO00443 1686 aa18.89■□□□□ 0.61
RFX1-201ENST00000254325 GRPEL1Q9HAV7 217 aa18.89■□□□□ 0.61
RFX1-201ENST00000254325 VPS37CA5D8V6 355 aaPredicted RBP18.88■□□□□ 0.61
RFX1-201ENST00000254325 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
RFX1-201ENST00000254325 PSMA5P28066 241 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 KIF6Q6ZMV9 814 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 ATP6V1DQ9Y5K8 247 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 METTL22Q9BUU2 404 aaPredicted RBP18.88■□□□□ 0.61
RFX1-201ENST00000254325 TOPAZ1Q8N9V7 1692 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 PDRG1Q9NUG6 133 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 TAOK2Q9UL54 1235 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
RFX1-201ENST00000254325 CCDC85AQ96PX6 553 aaPredicted RBP18.87■□□□□ 0.61
RFX1-201ENST00000254325 IL2RBP14784 551 aa18.86■□□□□ 0.61
RFX1-201ENST00000254325 PLCB2Q00722 1185 aa18.86■□□□□ 0.61
RFX1-201ENST00000254325 POLA2Q14181 598 aa18.86■□□□□ 0.61
RFX1-201ENST00000254325 GCKRQ14397 625 aa18.86■□□□□ 0.61
RFX1-201ENST00000254325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
RFX1-201ENST00000254325 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
RFX1-201ENST00000254325 WDR33Q9C0J8 1336 aaKnown RBP18.85■□□□□ 0.61
RFX1-201ENST00000254325 SLAIN2Q9P270 581 aa18.85■□□□□ 0.61
RFX1-201ENST00000254325 LMBR1LQ6UX01 489 aa18.85■□□□□ 0.61
RFX1-201ENST00000254325 CWC25Q9NXE8 425 aaPredicted RBP18.85■□□□□ 0.61
RFX1-201ENST00000254325 PCDH11XQ9BZA7 1347 aa18.85■□□□□ 0.61
RFX1-201ENST00000254325 PCDH11YQ9BZA8 1340 aa18.85■□□□□ 0.61
RFX1-201ENST00000254325 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
RFX1-201ENST00000254325 SGSM2O43147 1006 aa18.84■□□□□ 0.61
RFX1-201ENST00000254325 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
RFX1-201ENST00000254325 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
RFX1-201ENST00000254325 ADCY9O60503 1353 aa18.84■□□□□ 0.61
RFX1-201ENST00000254325 FMN2Q9NZ56 1722 aa18.83■□□□□ 0.61
RFX1-201ENST00000254325 CSPP1Q1MSJ5 1256 aa18.83■□□□□ 0.61
RFX1-201ENST00000254325 BLOC1S2Q6QNY1 142 aa18.83■□□□□ 0.61
RFX1-201ENST00000254325 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.61
RFX1-201ENST00000254325 LIMCH1Q9UPQ0 1083 aa18.83■□□□□ 0.61
RFX1-201ENST00000254325 MBD3O95983 291 aa18.83■□□□□ 0.6
RFX1-201ENST00000254325 NASPP49321 788 aaPredicted RBP18.83■□□□□ 0.6
RFX1-201ENST00000254325 CCDC83Q8IWF9 413 aa18.82■□□□□ 0.6
RFX1-201ENST00000254325 CEP126Q9P2H0 1117 aa18.82■□□□□ 0.6
RFX1-201ENST00000254325 CYP27B1O15528 508 aa18.82■□□□□ 0.6
RFX1-201ENST00000254325 PHF14O94880 888 aa18.82■□□□□ 0.6
RFX1-201ENST00000254325 STARD3NLO95772 234 aa18.81■□□□□ 0.6
RFX1-201ENST00000254325 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
RFX1-201ENST00000254325 KAT6BQ8WYB5 2073 aa18.81■□□□□ 0.6
RFX1-201ENST00000254325 NMIQ13287 307 aaPredicted RBP18.81■□□□□ 0.6
RFX1-201ENST00000254325 LRRFIP1Q32MZ4 808 aaKnown RBP18.81■□□□□ 0.6
RFX1-201ENST00000254325 A1BGP04217 495 aa18.81■□□□□ 0.6
RFX1-201ENST00000254325 XRCC6P12956 609 aaKnown RBP eCLIP18.81■□□□□ 0.6
RFX1-201ENST00000254325 WASHC4Q2M389 1173 aa18.81■□□□□ 0.6
RFX1-201ENST00000254325 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
RFX1-201ENST00000254325 KLHL40Q2TBA0 621 aa18.8■□□□□ 0.6
RFX1-201ENST00000254325 RAD50Q92878 1312 aa18.8■□□□□ 0.6
RFX1-201ENST00000254325 VIRMAQ69YN4 1812 aaKnown RBP18.8■□□□□ 0.6
RFX1-201ENST00000254325 TFCP2Q12800 502 aa18.8■□□□□ 0.6
RFX1-201ENST00000254325 EAF2Q96CJ1 260 aaPredicted RBP18.8■□□□□ 0.6
RFX1-201ENST00000254325 STK3Q13188 491 aa18.8■□□□□ 0.6
RFX1-201ENST00000254325 FAM184AQ8NB25 1140 aa18.8■□□□□ 0.6
RFX1-201ENST00000254325 ZSCAN31Q96LW9 406 aaPredicted RBP18.8■□□□□ 0.6
RFX1-201ENST00000254325 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
RFX1-201ENST00000254325 FAM177BA6PVY3 158 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 H3BQV1 296 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 FIBPO43427 364 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 MSNP26038 577 aaKnown RBP18.79■□□□□ 0.6
RFX1-201ENST00000254325 HSPA4P34932 840 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 IFFO2Q5TF58 517 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 BRINP3Q76B58 766 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 NAP1L5Q96NT1 182 aaPredicted RBP18.79■□□□□ 0.6
RFX1-201ENST00000254325 CPA1P15085 419 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 PKP1Q13835 747 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 PI4K2BQ8TCG2 481 aa18.79■□□□□ 0.6
RFX1-201ENST00000254325 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
RFX1-201ENST00000254325 PXDNLA1KZ92 1463 aa18.78■□□□□ 0.6
RFX1-201ENST00000254325 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
RFX1-201ENST00000254325 SNX14Q9Y5W7 946 aa18.78■□□□□ 0.6
RFX1-201ENST00000254325 CCDC158Q5M9N0 1113 aa18.78■□□□□ 0.6
RFX1-201ENST00000254325 AK2P54819 239 aa18.78■□□□□ 0.6
RFX1-201ENST00000254325 TTC39AQ5SRH9 613 aa18.78■□□□□ 0.6
RFX1-201ENST00000254325 DDX46Q7L014 1031 aaKnown RBP18.78■□□□□ 0.6
RFX1-201ENST00000254325 PXDNQ92626 1479 aa18.77■□□□□ 0.6
RFX1-201ENST00000254325 GDPD2Q9HCC8 539 aa18.77■□□□□ 0.6
RFX1-201ENST00000254325 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.6
RFX1-201ENST00000254325 TNS3Q68CZ2 1445 aa18.77■□□□□ 0.59
RFX1-201ENST00000254325 IGKV5-2P06315 115 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms