RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 VPS18Q9P253 973 aa15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 SF3B2Q13435 895 aaKnown RBP15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 ARFGAP2Q8N6H7 521 aa15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 ZNF428Q96B54 188 aa15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 SCLT1Q96NL6 688 aa15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA3-201ENST00000253812 MAP2K2P36507 400 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 FKBP15Q5T1M5 1219 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CCDC178Q5BJE1 867 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CFAP57Q96MR6 1250 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CTDP1Q9Y5B0 961 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 DHX29Q7Z478 1369 aaKnown RBP15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 LIG1P18858 919 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CASTP20810 708 aaKnown RBP15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 FAM200AQ8TCP9 573 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 GOLGA1Q92805 767 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 RAPGEF6Q8TEU7 1601 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 VPS36Q86VN1 386 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CEP131Q9UPN4 1083 aa15.19■□□□□ 0.02
PCDHGA3-201ENST00000253812 CCDC160A6NGH7 325 aa15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 NUP88Q99567 741 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 TMX1Q9H3N1 280 aa15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 FMNL3Q8IVF7 1028 aa15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 GDPD2Q9HCC8 539 aa15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
PCDHGA3-201ENST00000253812 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 CLNS1AP54105 237 aaKnown RBP15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 CPLX3Q8WVH0 158 aa15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 ZFYP08048 801 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 SLC3A2P08195 630 aaKnown RBP15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 WASF1Q92558 559 aa15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 LIMCH1Q9UPQ0 1083 aa15.17■□□□□ 0.02
PCDHGA3-201ENST00000253812 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
PCDHGA3-201ENST00000253812 KLHL10Q6JEL2 608 aa15.16■□□□□ 0.02
PCDHGA3-201ENST00000253812 CACNA2D4Q7Z3S7 1137 aa15.16■□□□□ 0.02
PCDHGA3-201ENST00000253812 B4GALNT4Q76KP1 1039 aa15.16■□□□□ 0.02
PCDHGA3-201ENST00000253812 ERO1AQ96HE7 468 aa15.16■□□□□ 0.02
PCDHGA3-201ENST00000253812 PLCH2O75038 1416 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 SKAP1Q86WV1 359 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 MYRIPQ8NFW9 859 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 JADE2Q9NQC1 790 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 DNAJC21Q5F1R6 531 aaKnown RBP15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 CTNNA3Q9UI47 895 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 PIP4K2BP78356 416 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 GTF3C6Q969F1 213 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 STRN4Q9NRL3 753 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 STX6O43752 255 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 SLFN5Q08AF3 891 aa15.15■□□□□ 0.02
PCDHGA3-201ENST00000253812 KIF3CO14782 793 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 ZHX3Q9H4I2 956 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 NOS1P29475 1434 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 CCDC155Q8N6L0 562 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 HOOK3Q86VS8 718 aa15.14■□□□□ 0.01
PCDHGA3-201ENST00000253812 CCDC69A6NI79 296 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 MX1P20591 662 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 CCDC50Q8IVM0 306 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 INPP5BP32019 993 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 DNA2P51530 1060 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 STIM2Q9P246 746 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 FEZ2Q9UHY8 353 aaPredicted RBP15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 ANKRD18BA2A2Z9 1011 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 PHACTR2O75167 634 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 MIPOL1Q8TD10 442 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 U2AF2P26368 475 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 HDXQ7Z353 690 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 FAM76AQ8TAV0 307 aa15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 LUC7L2Q9Y383 392 aaKnown RBP15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCDHGA3-201ENST00000253812 A6NNZ2 444 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 TUBB8Q3ZCM7 444 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 LMNTD2Q8IXW0 634 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 PPFIBP2Q8ND30 876 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 CTCFLQ8NI51 663 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 LACTBP83111 547 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 ZNF530Q6P9A1 599 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 CPLX4Q7Z7G2 160 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 RNF168Q8IYW5 571 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 FCHSD2O94868 740 aa15.12■□□□□ 0.01
PCDHGA3-201ENST00000253812 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms