RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
ACTN4-201ENST00000252699 NAPBQ9H115 298 aa20.17■□□□□ 0.82
ACTN4-201ENST00000252699 CCDC83Q8IWF9 413 aa20.16■□□□□ 0.82
ACTN4-201ENST00000252699 NASPP49321 788 aaPredicted RBP20.16■□□□□ 0.82
ACTN4-201ENST00000252699 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
ACTN4-201ENST00000252699 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
ACTN4-201ENST00000252699 CDKL5O76039 1030 aa20.16■□□□□ 0.82
ACTN4-201ENST00000252699 PA2G4Q9UQ80 394 aaKnown RBP20.16■□□□□ 0.82
ACTN4-201ENST00000252699 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
ACTN4-201ENST00000252699 RFC4P35249 363 aa20.15■□□□□ 0.82
ACTN4-201ENST00000252699 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
ACTN4-201ENST00000252699 RPGRQ92834 1020 aaKnown RBP20.15■□□□□ 0.82
ACTN4-201ENST00000252699 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
ACTN4-201ENST00000252699 TBC1D32Q96NH3 1257 aa20.15■□□□□ 0.82
ACTN4-201ENST00000252699 ZBTB7BO15156 539 aaPredicted RBP20.15■□□□□ 0.82
ACTN4-201ENST00000252699 JMYQ8N9B5 988 aa20.14■□□□□ 0.82
ACTN4-201ENST00000252699 ZSCAN29Q8IWY8 852 aaPredicted RBP20.14■□□□□ 0.81
ACTN4-201ENST00000252699 ME1P48163 572 aa20.14■□□□□ 0.81
ACTN4-201ENST00000252699 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
ACTN4-201ENST00000252699 TET3O43151 1660 aa20.13■□□□□ 0.81
ACTN4-201ENST00000252699 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
ACTN4-201ENST00000252699 NBPF5PQ86XG9 351 aaPredicted RBP20.13■□□□□ 0.81
ACTN4-201ENST00000252699 ARHGAP31Q2M1Z3 1444 aa20.13■□□□□ 0.81
ACTN4-201ENST00000252699 NAT10Q9H0A0 1025 aaKnown RBP20.13■□□□□ 0.81
ACTN4-201ENST00000252699 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
ACTN4-201ENST00000252699 DZIP1Q86YF9 867 aaKnown RBP20.13■□□□□ 0.81
ACTN4-201ENST00000252699 PCMTD1Q96MG8 357 aaPredicted RBP20.13■□□□□ 0.81
ACTN4-201ENST00000252699 NLRP1Q9C000 1473 aa20.12■□□□□ 0.81
ACTN4-201ENST00000252699 HOXB7P09629 217 aa20.12■□□□□ 0.81
ACTN4-201ENST00000252699 CCDC152Q4G0S7 254 aa20.12■□□□□ 0.81
ACTN4-201ENST00000252699 FERMT3Q86UX7 667 aa20.12■□□□□ 0.81
ACTN4-201ENST00000252699 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
ACTN4-201ENST00000252699 CCDC43Q96MW1 224 aaKnown RBP20.12■□□□□ 0.81
ACTN4-201ENST00000252699 KIF1BO60333 1816 aa20.12■□□□□ 0.81
ACTN4-201ENST00000252699 ZNF213O14771 459 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 OLFM4Q6UX06 510 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 LIMCH1Q9UPQ0 1083 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 IQGAP3Q86VI3 1631 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 SH2B1Q9NRF2 756 aaPredicted RBP20.11■□□□□ 0.81
ACTN4-201ENST00000252699 NIP7Q9Y221 180 aaKnown RBP eCLIP20.11■□□□□ 0.81
ACTN4-201ENST00000252699 TMEM94Q12767 1356 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
ACTN4-201ENST00000252699 USP5P45974 858 aa20.11■□□□□ 0.81
ACTN4-201ENST00000252699 HMGB1P09429 215 aaKnown RBP20.1■□□□□ 0.81
ACTN4-201ENST00000252699 PDIA4P13667 645 aaKnown RBP20.1■□□□□ 0.81
ACTN4-201ENST00000252699 TTF1Q15361 905 aaPredicted RBP20.1■□□□□ 0.81
ACTN4-201ENST00000252699 ATP2B3Q16720 1220 aa20.1■□□□□ 0.81
ACTN4-201ENST00000252699 PRR36Q9H6K5 1346 aa20.09■□□□□ 0.81
ACTN4-201ENST00000252699 SPATA32Q96LK8 384 aa20.09■□□□□ 0.81
ACTN4-201ENST00000252699 LARP6Q9BRS8 491 aaKnown RBP20.09■□□□□ 0.81
ACTN4-201ENST00000252699 TSPY26PQ9H489 355 aa20.09■□□□□ 0.81
ACTN4-201ENST00000252699 C6orf229H3BNL8 230 aa20.09■□□□□ 0.81
ACTN4-201ENST00000252699 SLC52A2Q9HAB3 445 aa20.09■□□□□ 0.81
ACTN4-201ENST00000252699 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
ACTN4-201ENST00000252699 SETDB2Q96T68 719 aa20.08■□□□□ 0.81
ACTN4-201ENST00000252699 CFAP45Q9UL16 551 aa20.08■□□□□ 0.81
ACTN4-201ENST00000252699 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.81
ACTN4-201ENST00000252699 FAM135BQ49AJ0 1406 aa20.08■□□□□ 0.81
ACTN4-201ENST00000252699 BCL11BQ9C0K0 894 aaPredicted RBP20.08■□□□□ 0.8
ACTN4-201ENST00000252699 TXLNAP40222 546 aa20.08■□□□□ 0.8
ACTN4-201ENST00000252699 POLR3DP05423 398 aaPredicted RBP20.07■□□□□ 0.8
ACTN4-201ENST00000252699 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
ACTN4-201ENST00000252699 UQCRFS1P1P0C7P4 283 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 IPO7O95373 1038 aaKnown RBP20.06■□□□□ 0.8
ACTN4-201ENST00000252699 C8orf34Q49A92 452 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 IL17REQ8NFR9 667 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 PIBF1Q8WXW3 757 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 MKNK2Q9HBH9 465 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 USP19O94966 1318 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 NLRP3Q96P20 1036 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 ESYT1Q9BSJ8 1104 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 CDCA7Q9BWT1 371 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-201ENST00000252699 ATP7BP35670 1465 aa20.06■□□□□ 0.8
ACTN4-201ENST00000252699 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-201ENST00000252699 UTP14AQ9BVJ6 771 aaKnown RBP20.05■□□□□ 0.8
ACTN4-201ENST00000252699 TNMDQ9H2S6 317 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 SYNMO15061 1565 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 PLEKHM2Q8IWE5 1019 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 WASF1Q92558 559 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 TRIM5Q9C035 493 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 BICC1Q9H694 974 aaKnown RBP20.05■□□□□ 0.8
ACTN4-201ENST00000252699 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 RANBP6O60518 1105 aaKnown RBP20.05■□□□□ 0.8
ACTN4-201ENST00000252699 HAND2P61296 217 aa20.05■□□□□ 0.8
ACTN4-201ENST00000252699 ZNF219Q9P2Y4 722 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-201ENST00000252699 EIF4A1P60842 406 aaKnown RBP20.04■□□□□ 0.8
ACTN4-201ENST00000252699 ARID3AQ99856 593 aa20.04■□□□□ 0.8
ACTN4-201ENST00000252699 TMOD2Q9NZR1 351 aa20.04■□□□□ 0.8
ACTN4-201ENST00000252699 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
ACTN4-201ENST00000252699 IRS4O14654 1257 aaPredicted RBP20.04■□□□□ 0.8
ACTN4-201ENST00000252699 RNF41Q9H4P4 317 aaPredicted RBP20.04■□□□□ 0.8
ACTN4-201ENST00000252699 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
ACTN4-201ENST00000252699 ZNF592Q92610 1267 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 PLEKHF1Q96S99 279 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 CDC42BPBQ9Y5S2 1711 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 A1BGP04217 495 aa20.03■□□□□ 0.8
ACTN4-201ENST00000252699 CCDC192P0DO97 292 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms