RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 BCL9LQ86UU0 1499 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 CLSTN1O94985 981 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 MED23Q9ULK4 1368 aa5.05□□□□□ -1.6
UBE4A-201ENST00000252108 UNC5CLQ8IV45 518 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 FAM184AQ8NB25 1140 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 DOT1LQ8TEK3 1739 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 G3V3G9 751 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 XRCC6P12956 609 aaKnown RBP eCLIP5.04□□□□□ -1.6
UBE4A-201ENST00000252108 DCAF8Q5TAQ9 597 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 NRDCO43847 1150 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 RFX5P48382 616 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-201ENST00000252108 FLIIQ13045 1269 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 SBF2Q86WG5 1849 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 TNPO1Q92973 898 aaKnown RBP5.04□□□□□ -1.6
UBE4A-201ENST00000252108 PDLIM2Q96JY6 352 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 LTBP4Q8N2S1 1624 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 GNAT3A8MTJ3 354 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 CCT4P50991 539 aaKnown RBP5.04□□□□□ -1.6
UBE4A-201ENST00000252108 COL9A3Q14050 684 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-201ENST00000252108 CHMP4CQ96CF2 233 aa5.04□□□□□ -1.6
UBE4A-201ENST00000252108 KLHL40Q2TBA0 621 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 ANKRD45Q5TZF3 282 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 RFX7Q2KHR2 1363 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 VSIG10Q8N0Z9 540 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 DDX60LQ5H9U9 1706 aaKnown RBP5.03□□□□□ -1.6
UBE4A-201ENST00000252108 KCNQ3O43525 872 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 MLECQ14165 292 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 TMEM87AQ8NBN3 555 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 LGR6Q9HBX8 967 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.03□□□□□ -1.6
UBE4A-201ENST00000252108 PHF8Q9UPP1 1060 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 ERBB4Q15303 1308 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 SPRYD3Q8NCJ5 442 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.03□□□□□ -1.67e-7■■□□□ 13.9
UBE4A-201ENST00000252108 PPP1R1BQ9UD71 204 aaPredicted RBP5.03□□□□□ -1.6
UBE4A-201ENST00000252108 PALD1Q9ULE6 856 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 CHD4Q14839 1912 aa5.03□□□□□ -1.6
UBE4A-201ENST00000252108 PKP1Q13835 747 aa5.03□□□□□ -1.61
UBE4A-201ENST00000252108 LMBRD1Q9NUN5 540 aa5.03□□□□□ -1.61
UBE4A-201ENST00000252108 GIGYF1O75420 1035 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 TAF7Q15545 349 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 RABL6Q3YEC7 729 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 AKAP4Q5JQC9 854 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 LSG1Q9H089 658 aaKnown RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 ALDH8A1Q9H2A2 487 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 DIAPH3Q9NSV4 1193 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 LTBP1Q14766 1721 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 NHSQ6T4R5 1651 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 CHMLP26374 656 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 ZNF445P59923 1031 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 DHX8Q14562 1220 aaKnown RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 NKX1-1Q15270 411 aaPredicted RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 PPP1R9BQ96SB3 815 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 LY75O60449 1722 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 HSPA4P34932 840 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 ANAPC15P60006 121 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 PHAXQ9H814 394 aaKnown RBP5.02□□□□□ -1.61
UBE4A-201ENST00000252108 SLC4A2P04920 1241 aa5.02□□□□□ -1.61
UBE4A-201ENST00000252108 IGKV5-2P06315 115 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 ESYT1Q9BSJ8 1104 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 RRAGDQ9NQL2 400 aaPredicted RBP5.01□□□□□ -1.61
UBE4A-201ENST00000252108 MIS18AQ9NYP9 233 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 TAF1LQ8IZX4 1826 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 F6X3S4 739 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 RNMTO43148 476 aaKnown RBP5.01□□□□□ -1.61
UBE4A-201ENST00000252108 BRD1O95696 1058 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 UVSSAQ2YD98 709 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 PROSER3Q2NL68 480 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 CNKSR2Q8WXI2 1034 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 EID1Q9Y6B2 187 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 THSD7AQ9UPZ6 1657 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 MYH14Q7Z406 1995 aaKnown RBP5.01□□□□□ -1.61
UBE4A-201ENST00000252108 DYNC1I1O14576 645 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 NBPF7P0C2Y1 421 aaPredicted RBP5.01□□□□□ -1.61
UBE4A-201ENST00000252108 TSGA10IPQ3SY00 556 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 SOS2Q07890 1332 aaPredicted RBP5.01□□□□□ -1.61
UBE4A-201ENST00000252108 USPL1Q5W0Q7 1092 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 KIAA1211Q6ZU35 1233 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 FUCA2Q9BTY2 467 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 RAD50Q92878 1312 aa5.01□□□□□ -1.61
UBE4A-201ENST00000252108 SMARCA5O60264 1052 aaPredicted RBP5□□□□□ -1.61
UBE4A-201ENST00000252108 SRCIN1Q9C0H9 1055 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 GCP02774 474 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 GPT2Q8TD30 523 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 INTS4Q96HW7 963 aaKnown RBP5□□□□□ -1.61
UBE4A-201ENST00000252108 ORAI2Q96SN7 254 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 TAF3Q5VWG9 929 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 CDK5RAP2Q96SN8 1893 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 OFD1O75665 1012 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 SASS6Q6UVJ0 657 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 TSPY26PQ9H489 355 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 MAST2Q6P0Q8 1798 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 A0A0U1RQG5 324 aaPredicted RBP5□□□□□ -1.61
UBE4A-201ENST00000252108 PRAMEF22A3QJZ6 481 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 FOXP2O15409 715 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 SGSM2O43147 1006 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 SASH1O94885 1247 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 PDCL2Q8N4E4 241 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 KCNH5Q8NCM2 988 aa5□□□□□ -1.61
UBE4A-201ENST00000252108 STK31Q9BXU1 1019 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms