RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PALD1Q9ULE6 856 aa22.82■■□□□ 1.24
SNX4-201ENST00000251775 GADD45BO75293 160 aaPredicted RBP22.82■■□□□ 1.24
SNX4-201ENST00000251775 AOX1Q06278 1338 aa22.82■■□□□ 1.24
SNX4-201ENST00000251775 CAMTA1Q9Y6Y1 1673 aa22.82■■□□□ 1.24
SNX4-201ENST00000251775 RHPN1Q8TCX5 695 aa22.81■■□□□ 1.24
SNX4-201ENST00000251775 CHMP4AQ9BY43 222 aa22.81■■□□□ 1.24
SNX4-201ENST00000251775 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
SNX4-201ENST00000251775 CCDC94Q9BW85 323 aaPredicted RBP22.8■■□□□ 1.24
SNX4-201ENST00000251775 GDPD2Q9HCC8 539 aa22.8■■□□□ 1.24
SNX4-201ENST00000251775 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
SNX4-201ENST00000251775 JARID2Q92833 1246 aaPredicted RBP22.79■■□□□ 1.24
SNX4-201ENST00000251775 ANO2Q9NQ90 1003 aa22.79■■□□□ 1.24
SNX4-201ENST00000251775 DBF4Q9UBU7 674 aaPredicted RBP22.79■■□□□ 1.24
SNX4-201ENST00000251775 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
SNX4-201ENST00000251775 GIGYF1O75420 1035 aaPredicted RBP22.79■■□□□ 1.24
SNX4-201ENST00000251775 PHF14O94880 888 aa22.79■■□□□ 1.24
SNX4-201ENST00000251775 PIBF1Q8WXW3 757 aa22.79■■□□□ 1.24
SNX4-201ENST00000251775 OVOS2A0A0G2JMS6 1433 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 PRAMEF22A3QJZ6 481 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 PROSER3Q2NL68 480 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 FOXD4L6Q3SYB3 417 aaPredicted RBP22.78■■□□□ 1.24
SNX4-201ENST00000251775 DNTTIP2Q5QJE6 756 aaKnown RBP22.78■■□□□ 1.24
SNX4-201ENST00000251775 FOXD4L3Q6VB84 417 aaPredicted RBP22.78■■□□□ 1.24
SNX4-201ENST00000251775 MPNDQ8N594 471 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 IL25Q9H293 177 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 HEG1Q9ULI3 1381 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 PI4K2BQ8TCG2 481 aa22.78■■□□□ 1.24
SNX4-201ENST00000251775 ZNF830Q96NB3 372 aaPredicted RBP22.78■■□□□ 1.24
SNX4-201ENST00000251775 UVSSAQ2YD98 709 aa22.77■■□□□ 1.24
SNX4-201ENST00000251775 USP48Q86UV5 1035 aa22.77■■□□□ 1.24
SNX4-201ENST00000251775 PROSER2Q86WR7 435 aaPredicted RBP22.77■■□□□ 1.24
SNX4-201ENST00000251775 KIF1BPQ96EK5 621 aa22.77■■□□□ 1.24
SNX4-201ENST00000251775 ANAPC15P60006 121 aa22.77■■□□□ 1.24
SNX4-201ENST00000251775 FAM184AQ8NB25 1140 aa22.77■■□□□ 1.24
SNX4-201ENST00000251775 PRIMPOLQ96LW4 560 aa22.77■■□□□ 1.24
SNX4-201ENST00000251775 MAP4K4O95819 1239 aaPredicted RBP22.76■■□□□ 1.23
SNX4-201ENST00000251775 MCCP23508 829 aa22.76■■□□□ 1.23
SNX4-201ENST00000251775 ZNF710Q8N1W2 664 aa22.76■■□□□ 1.23
SNX4-201ENST00000251775 PRDM10Q9NQV6 1147 aa22.76■■□□□ 1.23
SNX4-201ENST00000251775 NOLC1Q14978 699 aaKnown RBP eCLIP22.76■■□□□ 1.23
SNX4-201ENST00000251775 USP25Q9UHP3 1055 aa22.76■■□□□ 1.23
SNX4-201ENST00000251775 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
SNX4-201ENST00000251775 C1orf167Q5SNV9 1468 aa22.75■■□□□ 1.23
SNX4-201ENST00000251775 TSC1Q92574 1164 aa22.75■■□□□ 1.23
SNX4-201ENST00000251775 GTF2F1P35269 517 aaKnown RBP eCLIP22.74■■□□□ 1.23
SNX4-201ENST00000251775 KIF1AQ12756 1690 aa22.74■■□□□ 1.23
SNX4-201ENST00000251775 ADAMTS7Q9UKP4 1686 aa22.74■■□□□ 1.23
SNX4-201ENST00000251775 HMGN5P82970 282 aaKnown RBP22.74■■□□□ 1.23
SNX4-201ENST00000251775 IL17RAQ96F46 866 aa22.74■■□□□ 1.23
SNX4-201ENST00000251775 TCHHQ07283 1943 aa22.74■■□□□ 1.23
SNX4-201ENST00000251775 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
SNX4-201ENST00000251775 KSR2Q6VAB6 950 aa22.73■■□□□ 1.23
SNX4-201ENST00000251775 TTC12Q9H892 705 aaPredicted RBP22.73■■□□□ 1.23
SNX4-201ENST00000251775 WDR33Q9C0J8 1336 aaKnown RBP22.73■■□□□ 1.23
SNX4-201ENST00000251775 ADCY5O95622 1261 aa22.72■■□□□ 1.23
SNX4-201ENST00000251775 MTX1Q13505 466 aa22.72■■□□□ 1.23
SNX4-201ENST00000251775 UPF3BQ9BZI7 483 aaKnown RBP22.72■■□□□ 1.23
SNX4-201ENST00000251775 ERBB3P21860 1342 aa22.72■■□□□ 1.23
SNX4-201ENST00000251775 ALS2Q96Q42 1657 aa22.72■■□□□ 1.23
SNX4-201ENST00000251775 C17orf53Q8N3J3 647 aaPredicted RBP22.72■■□□□ 1.23
SNX4-201ENST00000251775 TMEM87AQ8NBN3 555 aa22.72■■□□□ 1.23
SNX4-201ENST00000251775 ALDH1L1O75891 902 aa22.71■■□□□ 1.23
SNX4-201ENST00000251775 CWF19L2Q2TBE0 894 aaKnown RBP22.71■■□□□ 1.23
SNX4-201ENST00000251775 HSP90AB4PQ58FF6 505 aa22.71■■□□□ 1.23
SNX4-201ENST00000251775 C9orf78Q9NZ63 289 aaPredicted RBP22.71■■□□□ 1.23
SNX4-201ENST00000251775 CCDC183Q5T5S1 534 aa22.7■■□□□ 1.22
SNX4-201ENST00000251775 C19orf44Q9H6X5 657 aa22.7■■□□□ 1.22
SNX4-201ENST00000251775 SPTLC3Q9NUV7 552 aa22.7■■□□□ 1.22
SNX4-201ENST00000251775 RPAP1Q9BWH6 1393 aaPredicted RBP22.7■■□□□ 1.22
SNX4-201ENST00000251775 ZSCAN20P17040 1043 aaPredicted RBP22.69■■□□□ 1.22
SNX4-201ENST00000251775 DMTNQ08495 405 aa22.69■■□□□ 1.22
SNX4-201ENST00000251775 MST1RQ04912 1400 aa22.69■■□□□ 1.22
SNX4-201ENST00000251775 CRYBG1Q9Y4K1 1723 aa22.69■■□□□ 1.22
SNX4-201ENST00000251775 HSPA4P34932 840 aa22.69■■□□□ 1.22
SNX4-201ENST00000251775 HYPKQ9NX55 129 aa22.69■■□□□ 1.22
SNX4-201ENST00000251775 HCLS1P14317 486 aaPredicted RBP22.68■■□□□ 1.22
SNX4-201ENST00000251775 OS9Q13438 667 aaPredicted RBP22.68■■□□□ 1.22
SNX4-201ENST00000251775 UTP14CQ5TAP6 766 aaKnown RBP22.68■■□□□ 1.22
SNX4-201ENST00000251775 LMTK3Q96Q04 1460 aa22.68■■□□□ 1.22
SNX4-201ENST00000251775 SGSM2O43147 1006 aa22.68■■□□□ 1.22
SNX4-201ENST00000251775 USP42Q9H9J4 1324 aaKnown RBP22.68■■□□□ 1.22
SNX4-201ENST00000251775 SCN11AQ9UI33 1791 aa22.68■■□□□ 1.22
SNX4-201ENST00000251775 EPB41L2O43491 1005 aaKnown RBP22.67■■□□□ 1.22
SNX4-201ENST00000251775 PDIA6Q15084 440 aa22.67■■□□□ 1.22
SNX4-201ENST00000251775 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
SNX4-201ENST00000251775 PA2G4Q9UQ80 394 aaKnown RBP22.67■■□□□ 1.22
SNX4-201ENST00000251775 DDX17Q92841 729 aaKnown RBP22.67■■□□□ 1.22
SNX4-201ENST00000251775 DDX21Q9NR30 783 aaKnown RBP eCLIP22.67■■□□□ 1.22
SNX4-201ENST00000251775 CNPY2Q9Y2B0 182 aa22.67■■□□□ 1.22
SNX4-201ENST00000251775 C5P01031 1676 aa22.66■■□□□ 1.22
SNX4-201ENST00000251775 SLC39A6Q13433 755 aa22.66■■□□□ 1.22
SNX4-201ENST00000251775 ZHX1Q9UKY1 873 aaPredicted RBP22.66■■□□□ 1.22
SNX4-201ENST00000251775 AIMP1Q12904 312 aaKnown RBP22.66■■□□□ 1.22
SNX4-201ENST00000251775 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
SNX4-201ENST00000251775 TTC41PQ6P2S7 1318 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 LINS1Q8NG48 757 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 KIF3AQ9Y496 699 aa22.65■■□□□ 1.22
SNX4-201ENST00000251775 RAD50Q92878 1312 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms