RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 MCOLN1Q9GZU1 580 aa16.48■□□□□ 0.23
RFPL3-201ENST00000249007 RNF123Q5XPI4 1314 aa16.48■□□□□ 0.23
RFPL3-201ENST00000249007 STYK1Q6J9G0 422 aa16.48■□□□□ 0.23
RFPL3-201ENST00000249007 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
RFPL3-201ENST00000249007 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
RFPL3-201ENST00000249007 NPHP1O15259 732 aa16.47■□□□□ 0.23
RFPL3-201ENST00000249007 SRGNP10124 158 aa16.47■□□□□ 0.23
RFPL3-201ENST00000249007 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
RFPL3-201ENST00000249007 CCDC93Q567U6 631 aa16.46■□□□□ 0.23
RFPL3-201ENST00000249007 CYP4F22Q6NT55 531 aa16.46■□□□□ 0.23
RFPL3-201ENST00000249007 CNBD1Q8NA66 436 aa16.46■□□□□ 0.23
RFPL3-201ENST00000249007 CASP8AP2Q9UKL3 1982 aa16.45■□□□□ 0.22
RFPL3-201ENST00000249007 A0A087WZG4 1122 aa16.45■□□□□ 0.22
RFPL3-201ENST00000249007 EIF5P55010 431 aaKnown RBP16.45■□□□□ 0.22
RFPL3-201ENST00000249007 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
RFPL3-201ENST00000249007 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
RFPL3-201ENST00000249007 ARFGEF2Q9Y6D5 1785 aa16.45■□□□□ 0.22
RFPL3-201ENST00000249007 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
RFPL3-201ENST00000249007 LTBP1Q14766 1721 aa16.44■□□□□ 0.22
RFPL3-201ENST00000249007 CA12O43570 354 aa16.43■□□□□ 0.22
RFPL3-201ENST00000249007 ST5P78524 1137 aa16.43■□□□□ 0.22
RFPL3-201ENST00000249007 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
RFPL3-201ENST00000249007 C7orf43Q8WVR3 580 aa16.43■□□□□ 0.22
RFPL3-201ENST00000249007 SCN7AQ01118 1682 aa16.43■□□□□ 0.22
RFPL3-201ENST00000249007 STARD3NLO95772 234 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 MAP2K2P36507 400 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 SULT6B1Q6IMI4 303 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 GPC2Q8N158 579 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 LGR6Q9HBX8 967 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 MRC1P22897 1456 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 FMR1Q06787 632 aaKnown RBP eCLIP16.42■□□□□ 0.22
RFPL3-201ENST00000249007 DGKZQ13574 1117 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
RFPL3-201ENST00000249007 ZNF330Q9Y3S2 320 aaPredicted RBP16.42■□□□□ 0.22
RFPL3-201ENST00000249007 FZD9O00144 591 aa16.41■□□□□ 0.22
RFPL3-201ENST00000249007 AOC2O75106 756 aa16.41■□□□□ 0.22
RFPL3-201ENST00000249007 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
RFPL3-201ENST00000249007 CST9Q5W186 159 aa16.39■□□□□ 0.21
RFPL3-201ENST00000249007 RTKN2Q8IZC4 609 aa16.39■□□□□ 0.21
RFPL3-201ENST00000249007 TRPM7Q96QT4 1865 aa16.39■□□□□ 0.21
RFPL3-201ENST00000249007 RNMTO43148 476 aaKnown RBP16.38■□□□□ 0.21
RFPL3-201ENST00000249007 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
RFPL3-201ENST00000249007 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
RFPL3-201ENST00000249007 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
RFPL3-201ENST00000249007 TRAF5O00463 557 aa16.37■□□□□ 0.21
RFPL3-201ENST00000249007 NPR1P16066 1061 aa16.37■□□□□ 0.21
RFPL3-201ENST00000249007 PRPF38BQ5VTL8 546 aaKnown RBP16.37■□□□□ 0.21
RFPL3-201ENST00000249007 UBR2Q8IWV8 1755 aa16.37■□□□□ 0.21
RFPL3-201ENST00000249007 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
RFPL3-201ENST00000249007 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
RFPL3-201ENST00000249007 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
RFPL3-201ENST00000249007 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
RFPL3-201ENST00000249007 GJA3Q9Y6H8 435 aa16.36■□□□□ 0.21
RFPL3-201ENST00000249007 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
RFPL3-201ENST00000249007 CAMTA2O94983 1202 aa16.35■□□□□ 0.21
RFPL3-201ENST00000249007 SOX10P56693 466 aa16.35■□□□□ 0.21
RFPL3-201ENST00000249007 SAPCD2Q86UD0 394 aa16.35■□□□□ 0.21
RFPL3-201ENST00000249007 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
RFPL3-201ENST00000249007 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
RFPL3-201ENST00000249007 EPS15P42566 896 aa16.34■□□□□ 0.21
RFPL3-201ENST00000249007 SCNN1DP51172 638 aa16.34■□□□□ 0.21
RFPL3-201ENST00000249007 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
RFPL3-201ENST00000249007 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
RFPL3-201ENST00000249007 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
RFPL3-201ENST00000249007 KLRG2A4D1S0 409 aaPredicted RBP16.32■□□□□ 0.2
RFPL3-201ENST00000249007 CIAPIN1Q6FI81 312 aa16.32■□□□□ 0.2
RFPL3-201ENST00000249007 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
RFPL3-201ENST00000249007 HHIPL1Q96JK4 782 aa16.32■□□□□ 0.2
RFPL3-201ENST00000249007 CELF2O95319 508 aaKnown RBP16.31■□□□□ 0.2
RFPL3-201ENST00000249007 IL13P35225 146 aa16.31■□□□□ 0.2
RFPL3-201ENST00000249007 PSMD1Q99460 953 aa16.31■□□□□ 0.2
RFPL3-201ENST00000249007 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
RFPL3-201ENST00000249007 BCORQ6W2J9 1755 aa16.31■□□□□ 0.2
RFPL3-201ENST00000249007 DZIP3Q86Y13 1208 aaKnown RBP16.3■□□□□ 0.2
RFPL3-201ENST00000249007 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
RFPL3-201ENST00000249007 A1BGP04217 495 aa16.29■□□□□ 0.2
RFPL3-201ENST00000249007 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
RFPL3-201ENST00000249007 COL4A5P29400 1685 aa16.29■□□□□ 0.2
RFPL3-201ENST00000249007 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
RFPL3-201ENST00000249007 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
RFPL3-201ENST00000249007 NOGQ13253 232 aa16.28■□□□□ 0.2
RFPL3-201ENST00000249007 MTHFSDQ2M296 383 aaKnown RBP16.28■□□□□ 0.2
RFPL3-201ENST00000249007 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
RFPL3-201ENST00000249007 TPTE2Q6XPS3 522 aa16.28■□□□□ 0.2
RFPL3-201ENST00000249007 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
RFPL3-201ENST00000249007 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
RFPL3-201ENST00000249007 HMOX1P09601 288 aa16.27■□□□□ 0.19
RFPL3-201ENST00000249007 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.19
RFPL3-201ENST00000249007 GLIS2Q9BZE0 524 aaPredicted RBP16.26■□□□□ 0.19
RFPL3-201ENST00000249007 ZNF408Q9H9D4 720 aa16.26■□□□□ 0.19
RFPL3-201ENST00000249007 ADARB2Q9NS39 739 aaKnown RBP16.26■□□□□ 0.19
RFPL3-201ENST00000249007 TEFQ10587 303 aa16.25■□□□□ 0.19
RFPL3-201ENST00000249007 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
RFPL3-201ENST00000249007 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
RFPL3-201ENST00000249007 ZIC5Q96T25 663 aa16.25■□□□□ 0.19
RFPL3-201ENST00000249007 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
RFPL3-201ENST00000249007 GPRC5DQ9NZD1 345 aa16.24■□□□□ 0.19
RFPL3-201ENST00000249007 NIP7Q9Y221 180 aaKnown RBP eCLIP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms