RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 FAM43BQ6ZT52 329 aaPredicted RBP9.67□□□□□ -0.86
MTRF1-201ENST00000239852 FOXD4L4Q8WXT5 416 aaPredicted RBP9.67□□□□□ -0.86
MTRF1-201ENST00000239852 DDX21Q9NR30 783 aaKnown RBP eCLIP9.67□□□□□ -0.86
MTRF1-201ENST00000239852 NLRP2Q9NX02 1062 aa9.67□□□□□ -0.86
MTRF1-201ENST00000239852 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
MTRF1-201ENST00000239852 OS9Q13438 667 aaPredicted RBP9.67□□□□□ -0.86
MTRF1-201ENST00000239852 POLA2Q14181 598 aa9.67□□□□□ -0.86
MTRF1-201ENST00000239852 CLEC11AQ9Y240 323 aa9.67□□□□□ -0.86
MTRF1-201ENST00000239852 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
MTRF1-201ENST00000239852 KIAA0100Q14667 2235 aaKnown RBP9.66□□□□□ -0.86
MTRF1-201ENST00000239852 VCANP13611 3396 aa9.66□□□□□ -0.86
MTRF1-201ENST00000239852 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
MTRF1-201ENST00000239852 GTF2E1P29083 439 aaPredicted RBP9.66□□□□□ -0.86
MTRF1-201ENST00000239852 EAPPQ56P03 285 aaPredicted RBP9.66□□□□□ -0.86
MTRF1-201ENST00000239852 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
MTRF1-201ENST00000239852 PALLDQ8WX93 1383 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 DICER1Q9UPY3 1922 aaKnown RBP9.65□□□□□ -0.86
MTRF1-201ENST00000239852 MFAP1P55081 439 aaKnown RBP9.65□□□□□ -0.86
MTRF1-201ENST00000239852 PKN2Q16513 984 aaKnown RBP9.65□□□□□ -0.86
MTRF1-201ENST00000239852 ERFEQ4G0M1 354 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 CIAPIN1Q6FI81 312 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 PPARGC1BQ86YN6 1023 aaKnown RBP9.65□□□□□ -0.86
MTRF1-201ENST00000239852 KCNH5Q8NCM2 988 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 SNX27Q96L92 541 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 KCNG1Q9UIX4 513 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 TLL2Q9Y6L7 1015 aa9.65□□□□□ -0.86
MTRF1-201ENST00000239852 NFKBIEO00221 500 aa9.64□□□□□ -0.87
MTRF1-201ENST00000239852 CHRNA5P30532 468 aa9.64□□□□□ -0.87
MTRF1-201ENST00000239852 FAM50AQ14320 339 aaKnown RBP9.64□□□□□ -0.87
MTRF1-201ENST00000239852 CFAP70Q5T0N1 1121 aa9.64□□□□□ -0.87
MTRF1-201ENST00000239852 MAP1SQ66K74 1059 aaPredicted RBP9.64□□□□□ -0.87
MTRF1-201ENST00000239852 FAM122AQ96E09 287 aa9.64□□□□□ -0.87
MTRF1-201ENST00000239852 ADAMTSL1Q8N6G6 1762 aa9.64□□□□□ -0.87
MTRF1-201ENST00000239852 KDM4AO75164 1064 aa9.63□□□□□ -0.87
MTRF1-201ENST00000239852 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
MTRF1-201ENST00000239852 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
MTRF1-201ENST00000239852 SAGE1Q9NXZ1 904 aa9.63□□□□□ -0.87
MTRF1-201ENST00000239852 RRP9O43818 475 aaKnown RBP9.63□□□□□ -0.87
MTRF1-201ENST00000239852 RGL3Q3MIN7 710 aa9.63□□□□□ -0.87
MTRF1-201ENST00000239852 PNMA8AQ86V59 439 aaPredicted RBP9.63□□□□□ -0.87
MTRF1-201ENST00000239852 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
MTRF1-201ENST00000239852 SPTBN5Q9NRC6 3674 aaKnown RBP9.62□□□□□ -0.87
MTRF1-201ENST00000239852 GNPATO15228 680 aa9.62□□□□□ -0.87
MTRF1-201ENST00000239852 MMP14P50281 582 aa9.62□□□□□ -0.87
MTRF1-201ENST00000239852 TRIM44Q96DX7 344 aaPredicted RBP9.62□□□□□ -0.87
MTRF1-201ENST00000239852 HHIPL1Q96JK4 782 aa9.62□□□□□ -0.87
MTRF1-201ENST00000239852 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
MTRF1-201ENST00000239852 PWP2Q15269 919 aaKnown RBP9.61□□□□□ -0.87
MTRF1-201ENST00000239852 AKAP4Q5JQC9 854 aa9.61□□□□□ -0.87
MTRF1-201ENST00000239852 CCER1Q8TC90 406 aaPredicted RBP9.61□□□□□ -0.87
MTRF1-201ENST00000239852 SMARCC1Q92922 1105 aaPredicted RBP9.61□□□□□ -0.87
MTRF1-201ENST00000239852 HACL1Q9UJ83 578 aa9.61□□□□□ -0.87
MTRF1-201ENST00000239852 TRAK1Q9UPV9 953 aa9.61□□□□□ -0.87
MTRF1-201ENST00000239852 BRCA2P51587 3418 aa9.6□□□□□ -0.87
MTRF1-201ENST00000239852 PATL2C9JE40 543 aaKnown RBP9.6□□□□□ -0.87
MTRF1-201ENST00000239852 APBB1O00213 710 aa9.6□□□□□ -0.87
MTRF1-201ENST00000239852 TRPM7Q96QT4 1865 aa9.6□□□□□ -0.87
MTRF1-201ENST00000239852 EPHX2P34913 555 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 NOGQ13253 232 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 NEUROD2Q15784 382 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 CST9Q5W186 159 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 TMTC2Q8N394 836 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 CEP120Q8N960 986 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 CDK19Q9BWU1 502 aa9.59□□□□□ -0.87
MTRF1-201ENST00000239852 LAS1LQ9Y4W2 734 aaKnown RBP9.59□□□□□ -0.87
MTRF1-201ENST00000239852 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 SAPCD2Q86UD0 394 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 LINC00116Q8NCU8 138 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 STAC3Q96MF2 364 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 GYS1P13807 737 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 AEBP1Q8IUX7 1158 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 TTLL6Q8N841 843 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 RIPOR2Q9Y4F9 1068 aa9.58□□□□□ -0.88
MTRF1-201ENST00000239852 INSRP06213 1382 aa9.57□□□□□ -0.88
MTRF1-201ENST00000239852 CABP2Q9NPB3 220 aa9.57□□□□□ -0.88
MTRF1-201ENST00000239852 SOX12O15370 315 aa9.56□□□□□ -0.88
MTRF1-201ENST00000239852 CALD1Q05682 793 aaKnown RBP9.56□□□□□ -0.88
MTRF1-201ENST00000239852 LAMA3Q16787 3333 aa9.55□□□□□ -0.88
MTRF1-201ENST00000239852 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.55□□□□□ -0.88
MTRF1-201ENST00000239852 ZCRB1Q8TBF4 217 aaKnown RBP9.55□□□□□ -0.88
MTRF1-201ENST00000239852 RBM27Q9P2N5 1060 aaKnown RBP9.55□□□□□ -0.88
MTRF1-201ENST00000239852 ERBB4Q15303 1308 aa9.55□□□□□ -0.88
MTRF1-201ENST00000239852 LTBP3Q9NS15 1303 aa9.55□□□□□ -0.88
MTRF1-201ENST00000239852 NFAT5O94916 1531 aa9.55□□□□□ -0.88
MTRF1-201ENST00000239852 FMR1Q06787 632 aaKnown RBP eCLIP9.54□□□□□ -0.88
MTRF1-201ENST00000239852 SPTY2D1Q68D10 685 aaPredicted RBP9.54□□□□□ -0.88
MTRF1-201ENST00000239852 ANKRD13DQ6ZTN6 518 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 ANKRD24Q8TF21 1146 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 STXBP5LQ9Y2K9 1186 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 RTCBQ9Y3I0 505 aaKnown RBP9.54□□□□□ -0.88
MTRF1-201ENST00000239852 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 TTC36A6NLP5 189 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 HMGB1P1B2RPK0 211 aaPredicted RBP9.54□□□□□ -0.88
MTRF1-201ENST00000239852 H0YGN5 161 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 FBXO46Q6PJ61 603 aaPredicted RBP9.54□□□□□ -0.88
MTRF1-201ENST00000239852 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 ZIC5Q96T25 663 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 RAPGEFL1Q9UHV5 662 aa9.54□□□□□ -0.88
MTRF1-201ENST00000239852 FER1L6Q2WGJ9 1857 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms