RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PHLPP1O60346 1717 aa28.53■■■□□ 2.16
MSX2-201ENST00000239243 BICC1Q9H694 974 aaKnown RBP28.53■■■□□ 2.16
MSX2-201ENST00000239243 ERC2O15083 957 aa28.53■■■□□ 2.16
MSX2-201ENST00000239243 AFDNP55196 1824 aaKnown RBP28.52■■■□□ 2.16
MSX2-201ENST00000239243 PIP4K2AP48426 406 aaPredicted RBP28.52■■■□□ 2.16
MSX2-201ENST00000239243 KAZALD1Q96I82 304 aa28.52■■■□□ 2.16
MSX2-201ENST00000239243 COL15A1P39059 1388 aa28.52■■■□□ 2.16
MSX2-201ENST00000239243 LRP6O75581 1613 aa28.51■■■□□ 2.16
MSX2-201ENST00000239243 KIF2CQ99661 725 aa28.51■■■□□ 2.16
MSX2-201ENST00000239243 USP26Q9BXU7 913 aa28.51■■■□□ 2.16
MSX2-201ENST00000239243 PTCD1O75127 700 aaKnown RBP28.51■■■□□ 2.15
MSX2-201ENST00000239243 TSHZ3Q63HK5 1081 aa28.51■■■□□ 2.15
MSX2-201ENST00000239243 CLASRPQ8N2M8 674 aaKnown RBP28.51■■■□□ 2.15
MSX2-201ENST00000239243 NBPF26B4DH59 902 aa28.5■■■□□ 2.15
MSX2-201ENST00000239243 NBPF14Q5TI25 921 aa28.5■■■□□ 2.15
MSX2-201ENST00000239243 NBPF10Q6P3W6 841 aaKnown RBP28.5■■■□□ 2.15
MSX2-201ENST00000239243 NBPF15Q8N660 670 aa28.5■■■□□ 2.15
MSX2-201ENST00000239243 TEX13AQ9BXU3 409 aaPredicted RBP28.5■■■□□ 2.15
MSX2-201ENST00000239243 TRIM6-TRIM34B2RNG4 842 aa28.5■■■□□ 2.15
MSX2-201ENST00000239243 NUTM1Q86Y26 1132 aa28.5■■■□□ 2.15
MSX2-201ENST00000239243 WNK3Q9BYP7 1800 aa28.5■■■□□ 2.15
MSX2-201ENST00000239243 TTC41PQ6P2S7 1318 aa28.49■■■□□ 2.15
MSX2-201ENST00000239243 VSIG10Q8N0Z9 540 aa28.49■■■□□ 2.15
MSX2-201ENST00000239243 USP42Q9H9J4 1324 aaKnown RBP28.49■■■□□ 2.15
MSX2-201ENST00000239243 CDCA7Q9BWT1 371 aaPredicted RBP28.48■■■□□ 2.15
MSX2-201ENST00000239243 RILPL2Q969X0 211 aa28.47■■■□□ 2.15
MSX2-201ENST00000239243 G3BP1Q13283 466 aaKnown RBP eCLIP28.47■■■□□ 2.15
MSX2-201ENST00000239243 SLKQ9H2G2 1235 aaPredicted RBP28.47■■■□□ 2.15
MSX2-201ENST00000239243 ANTXR1Q9H6X2 564 aa28.47■■■□□ 2.15
MSX2-201ENST00000239243 EXOC5O00471 708 aa28.46■■■□□ 2.15
MSX2-201ENST00000239243 GPATCH3Q96I76 525 aa28.46■■■□□ 2.15
MSX2-201ENST00000239243 NUP188Q5SRE5 1749 aa28.46■■■□□ 2.15
MSX2-201ENST00000239243 NFKBIBQ15653 356 aa28.46■■■□□ 2.15
MSX2-201ENST00000239243 PI4K2BQ8TCG2 481 aa28.46■■■□□ 2.15
MSX2-201ENST00000239243 ITGB4P16144 1822 aa28.45■■■□□ 2.15
MSX2-201ENST00000239243 RABEP1Q15276 862 aa28.45■■■□□ 2.15
MSX2-201ENST00000239243 A1BGP04217 495 aa28.45■■■□□ 2.14
MSX2-201ENST00000239243 PIGBQ92521 554 aa28.45■■■□□ 2.14
MSX2-201ENST00000239243 PA2G4Q9UQ80 394 aaKnown RBP28.45■■■□□ 2.14
MSX2-201ENST00000239243 ESYT1Q9BSJ8 1104 aa28.44■■■□□ 2.14
MSX2-201ENST00000239243 TOM1O60784 492 aa28.43■■■□□ 2.14
MSX2-201ENST00000239243 CHMLP26374 656 aa28.43■■■□□ 2.14
MSX2-201ENST00000239243 THRAP3Q9Y2W1 955 aaKnown RBP28.43■■■□□ 2.14
MSX2-201ENST00000239243 A0A087WZG4 1122 aa28.43■■■□□ 2.14
MSX2-201ENST00000239243 GLRX3O76003 335 aaKnown RBP28.43■■■□□ 2.14
MSX2-201ENST00000239243 CNTROBQ8N137 903 aa28.42■■■□□ 2.14
MSX2-201ENST00000239243 AK9Q5TCS8 1911 aa28.42■■■□□ 2.14
MSX2-201ENST00000239243 NRAPQ86VF7 1730 aa28.42■■■□□ 2.14
MSX2-201ENST00000239243 IFIT2P09913 472 aaKnown RBP28.42■■■□□ 2.14
MSX2-201ENST00000239243 RABL6Q3YEC7 729 aaPredicted RBP28.42■■■□□ 2.14
MSX2-201ENST00000239243 UBE3BQ7Z3V4 1068 aa28.42■■■□□ 2.14
MSX2-201ENST00000239243 ATP5J2-PTCD1G3V325 749 aa28.41■■■□□ 2.14
MSX2-201ENST00000239243 BCL9O00512 1426 aa28.41■■■□□ 2.14
MSX2-201ENST00000239243 TTLL7Q6ZT98 887 aa28.41■■■□□ 2.14
MSX2-201ENST00000239243 ATG3Q9NT62 314 aa28.41■■■□□ 2.14
MSX2-201ENST00000239243 ASAP1Q9ULH1 1129 aa28.41■■■□□ 2.14
MSX2-201ENST00000239243 EPB41L2O43491 1005 aaKnown RBP28.4■■■□□ 2.14
MSX2-201ENST00000239243 STARD3NLO95772 234 aa28.4■■■□□ 2.14
MSX2-201ENST00000239243 ECHDC1Q9NTX5 307 aa28.4■■■□□ 2.14
MSX2-201ENST00000239243 CWC25Q9NXE8 425 aaPredicted RBP28.4■■■□□ 2.14
MSX2-201ENST00000239243 COPRSQ9NQ92 184 aa28.39■■■□□ 2.14
MSX2-201ENST00000239243 EPHA10Q5JZY3 1008 aa28.39■■■□□ 2.14
MSX2-201ENST00000239243 ADAMTS2O95450 1211 aa28.38■■■□□ 2.13
MSX2-201ENST00000239243 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
MSX2-201ENST00000239243 CCDC191Q8NCU4 936 aa28.38■■■□□ 2.13
MSX2-201ENST00000239243 CASP7P55210 303 aa28.38■■■□□ 2.13
MSX2-201ENST00000239243 SPATA31A1Q5TZJ5 1347 aa28.38■■■□□ 2.13
MSX2-201ENST00000239243 H7C1W4 665 aa28.37■■■□□ 2.13
MSX2-201ENST00000239243 K7ELQ4 463 aaPredicted RBP28.37■■■□□ 2.13
MSX2-201ENST00000239243 SASH1O94885 1247 aa28.37■■■□□ 2.13
MSX2-201ENST00000239243 MCCP23508 829 aa28.37■■■□□ 2.13
MSX2-201ENST00000239243 AACSQ86V21 672 aa28.37■■■□□ 2.13
MSX2-201ENST00000239243 NWD2Q9ULI1 1742 aa28.36■■■□□ 2.13
MSX2-201ENST00000239243 CHMP5Q9NZZ3 219 aa28.36■■■□□ 2.13
MSX2-201ENST00000239243 DNAJC10Q8IXB1 793 aa28.35■■■□□ 2.13
MSX2-201ENST00000239243 RBM42Q9BTD8 480 aaKnown RBP28.35■■■□□ 2.13
MSX2-201ENST00000239243 ZBTB3Q9H5J0 574 aa28.35■■■□□ 2.13
MSX2-201ENST00000239243 SPRYD3Q8NCJ5 442 aa28.34■■■□□ 2.13
MSX2-201ENST00000239243 SIL1Q9H173 461 aa28.34■■■□□ 2.13
MSX2-201ENST00000239243 TJP1Q07157 1748 aa28.34■■■□□ 2.13
MSX2-201ENST00000239243 RFX5P48382 616 aaPredicted RBP28.33■■■□□ 2.13
MSX2-201ENST00000239243 KIF6Q6ZMV9 814 aa28.33■■■□□ 2.13
MSX2-201ENST00000239243 DDB1Q16531 1140 aa28.32■■■□□ 2.12
MSX2-201ENST00000239243 ANO2Q9NQ90 1003 aa28.32■■■□□ 2.12
MSX2-201ENST00000239243 ST18O60284 1047 aa28.31■■■□□ 2.12
MSX2-201ENST00000239243 PTPN12Q05209 780 aaKnown RBP28.31■■■□□ 2.12
MSX2-201ENST00000239243 JARID2Q92833 1246 aaPredicted RBP28.31■■■□□ 2.12
MSX2-201ENST00000239243 ANAPC15P60006 121 aa28.31■■■□□ 2.12
MSX2-201ENST00000239243 PIP4K2BP78356 416 aa28.31■■■□□ 2.12
MSX2-201ENST00000239243 EAF2Q96CJ1 260 aaPredicted RBP28.31■■■□□ 2.12
MSX2-201ENST00000239243 DOT1LQ8TEK3 1739 aa28.31■■■□□ 2.12
MSX2-201ENST00000239243 HSP90AA1P07900 732 aaKnown RBP28.3■■■□□ 2.12
MSX2-201ENST00000239243 CD2BP2O95400 341 aaKnown RBP28.3■■■□□ 2.12
MSX2-201ENST00000239243 MAP4K4O95819 1239 aaPredicted RBP28.3■■■□□ 2.12
MSX2-201ENST00000239243 TCIRG1Q13488 830 aa28.3■■■□□ 2.12
MSX2-201ENST00000239243 KLHDC4Q8TBB5 520 aa28.3■■■□□ 2.12
MSX2-201ENST00000239243 ISCA1Q9BUE6 129 aa28.3■■■□□ 2.12
MSX2-201ENST00000239243 TRIM28Q13263 835 aaKnown RBP28.29■■■□□ 2.12
MSX2-201ENST00000239243 SYTL4Q96C24 671 aaPredicted RBP28.29■■■□□ 2.12
MSX2-201ENST00000239243 CIZ1Q9ULV3 898 aaPredicted RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms