RNA–Protein interactions for RNA: ENST00000234142.9

GREB1-201, Transcript of growth regulating estrogen receptor binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GREB1, Length 8,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-201ENST00000234142 OPA1O60313 960 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 KIF1BPQ96EK5 621 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 ALDH3A1P30838 453 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 MAP3K12Q12852 859 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
GREB1-201ENST00000234142 TCERG1LQ5VWI1 586 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 GTF2F1P35269 517 aaKnown RBP eCLIP13.58□□□□□ -0.247e-7■■■■□ 25.4
GREB1-201ENST00000234142 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 KIF5AQ12840 1032 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 PUF60Q9UHX1 559 aaKnown RBP13.58□□□□□ -0.24
GREB1-201ENST00000234142 BTBD11A6QL63 1104 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 IFIT1P09914 478 aaKnown RBP13.58□□□□□ -0.24
GREB1-201ENST00000234142 CTAGE1Q96RT6 745 aa13.58□□□□□ -0.24
GREB1-201ENST00000234142 METTL24Q5JXM2 366 aa13.57□□□□□ -0.24
GREB1-201ENST00000234142 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
GREB1-201ENST00000234142 PPP1R9BQ96SB3 815 aa13.57□□□□□ -0.24
GREB1-201ENST00000234142 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
GREB1-201ENST00000234142 ATP2A2P16615 1042 aaKnown RBP13.57□□□□□ -0.24
GREB1-201ENST00000234142 RPUSD2Q8IZ73 545 aaKnown RBP13.57□□□□□ -0.24
GREB1-201ENST00000234142 ARFGAP3Q9NP61 516 aa13.57□□□□□ -0.24
GREB1-201ENST00000234142 MINDY4BA8MYZ0 360 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 PRPF31Q8WWY3 499 aaKnown RBP13.56□□□□□ -0.24
GREB1-201ENST00000234142 FAM114A2Q9NRY5 505 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 TXNDC16Q9P2K2 825 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 NLRP5P59047 1200 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 TRAF1Q13077 416 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
GREB1-201ENST00000234142 OTUD6BQ8N6M0 293 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 PAIP2Q9BPZ3 127 aaKnown RBP13.56□□□□□ -0.24
GREB1-201ENST00000234142 CWC25Q9NXE8 425 aaPredicted RBP13.56□□□□□ -0.24
GREB1-201ENST00000234142 TACC1O75410 805 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 GAS8O95995 478 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
GREB1-201ENST00000234142 SH3BP5O60239 455 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 CNGA1P29973 690 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
GREB1-201ENST00000234142 PTPRGP23470 1445 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 C16orf45Q96MC5 204 aaPredicted RBP13.55□□□□□ -0.24
GREB1-201ENST00000234142 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 CYLC1P35663 651 aaPredicted RBP13.55□□□□□ -0.24
GREB1-201ENST00000234142 ERMNQ8TAM6 284 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 ANKIB1Q9P2G1 1089 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 PPP4R3BQ5MIZ7 849 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 CCDC144CPQ8IYA2 1237 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 ZPR1O75312 459 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 CEP128Q6ZU80 1094 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 ZNF354CQ86Y25 554 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
GREB1-201ENST00000234142 ZNF213O14771 459 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 CCDC63Q8NA47 563 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 LMBR1Q8WVP7 490 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 FMNL3Q8IVF7 1028 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 BACH2Q9BYV9 841 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 BICD1Q96G01 975 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 EXOC1Q9NV70 894 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 WDR78Q5VTH9 848 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 MSANTD4Q8NCY6 345 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 FEZ2Q9UHY8 353 aaPredicted RBP13.54□□□□□ -0.24
GREB1-201ENST00000234142 USH1CQ9Y6N9 552 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
GREB1-201ENST00000234142 CLGNO14967 610 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 TBCAO75347 108 aaKnown RBP13.53□□□□□ -0.24
GREB1-201ENST00000234142 TUBB4AP04350 444 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 UBA7P41226 1012 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
GREB1-201ENST00000234142 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
GREB1-201ENST00000234142 CCDC121Q6ZUS5 278 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 KRT222Q8N1A0 295 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 SLC5A1P13866 664 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 CCDC129Q6ZRS4 1044 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 TRIM7Q9C029 511 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
GREB1-201ENST00000234142 RBM25P49756 843 aaKnown RBP13.53□□□□□ -0.24
GREB1-201ENST00000234142 SAMM50Q9Y512 469 aa13.53□□□□□ -0.24
GREB1-201ENST00000234142 USP25Q9UHP3 1055 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 BMP15O95972 392 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 CFAP157Q5JU67 520 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 SPTY2D1Q68D10 685 aaPredicted RBP13.52□□□□□ -0.24
GREB1-201ENST00000234142 MIPOL1Q8TD10 442 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 IMPG2Q9BZV3 1241 aa13.52□□□□□ -0.24
GREB1-201ENST00000234142 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.25
GREB1-201ENST00000234142 RANBP6O60518 1105 aaKnown RBP13.52□□□□□ -0.25
GREB1-201ENST00000234142 RSRC1Q96IZ7 334 aaKnown RBP13.52□□□□□ -0.25
GREB1-201ENST00000234142 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
GREB1-201ENST00000234142 PDE4BQ07343 736 aa13.52□□□□□ -0.25
GREB1-201ENST00000234142 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
GREB1-201ENST00000234142 RPGRIP1LQ68CZ1 1315 aa13.51□□□□□ -0.25
GREB1-201ENST00000234142 MYO1BO43795 1136 aa13.51□□□□□ -0.25
GREB1-201ENST00000234142 DNAJC21Q5F1R6 531 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms