RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 SYCE3A1L190 88 aa11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 MAP4K4O95819 1239 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 CHMLP26374 656 aa11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 C17orf53Q8N3J3 647 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 NGDNQ8NEJ9 315 aaKnown RBP11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 LTV1Q96GA3 475 aaPredicted RBP11.39□□□□□ -0.59
HLA-DOA-201ENST00000229829 ARHGEF10O15013 1369 aa11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 COL5A3P25940 1745 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 DYNC1I1O14576 645 aa11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 MTERF4Q7Z6M4 381 aaKnown RBP11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 CCDC94Q9BW85 323 aaPredicted RBP11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 SASS6Q6UVJ0 657 aa11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 IL17REQ8NFR9 667 aa11.38□□□□□ -0.59
HLA-DOA-201ENST00000229829 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 FLT4P35916 1363 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 KDRP35968 1356 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 IGSF1Q8N6C5 1336 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 DMTNQ08495 405 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 CSPP1Q1MSJ5 1256 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 AMOTL2Q9Y2J4 779 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 ANKLE2Q86XL3 938 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 GDPD2Q9HCC8 539 aa11.37□□□□□ -0.59
HLA-DOA-201ENST00000229829 NLRP6P59044 892 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 GNAT3A8MTJ3 354 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 GNAI3P08754 354 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 C5P01031 1676 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 DTNBO60941 627 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 BRD1O95696 1058 aa11.36□□□□□ -0.59
HLA-DOA-201ENST00000229829 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 CUL4AQ13619 759 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 ZKSCAN5Q9Y2L8 839 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 SOS2Q07890 1332 aaPredicted RBP11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 TUBGCP6Q96RT7 1819 aa11.35□□□□□ -0.59
HLA-DOA-201ENST00000229829 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 LRSAM1Q6UWE0 723 aa11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 PDLIM2Q96JY6 352 aa11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 GADD45BO75293 160 aaPredicted RBP11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 EIF2S2P20042 333 aaKnown RBP11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 STAP2Q9UGK3 403 aa11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 NOL7Q9UMY1 257 aaKnown RBP11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 TAF1LQ8IZX4 1826 aa11.34□□□□□ -0.59
HLA-DOA-201ENST00000229829 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 HOXC9P31274 260 aa11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 MCCP23508 829 aa11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 LAMB1P07942 1786 aa11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 ANXA1P04083 346 aa11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 NBPF7P0C2Y1 421 aaPredicted RBP11.33□□□□□ -0.6
HLA-DOA-201ENST00000229829 TCHHQ07283 1943 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 TAF7Q15545 349 aaPredicted RBP11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 HDGFL1Q5TGJ6 251 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 CCDC39Q9UFE4 941 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 DLEC1Q9Y238 1755 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 CPDO75976 1380 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 ATP2B3Q16720 1220 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 ERICH4A6NGS2 130 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 U2AF2P26368 475 aaKnown RBP eCLIP11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 KCNJ4P48050 445 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 MCM2P49736 904 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 ANAPC15P60006 121 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
HLA-DOA-201ENST00000229829 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
HLA-DOA-201ENST00000229829 PDCL2Q8N4E4 241 aa11.31□□□□□ -0.6
HLA-DOA-201ENST00000229829 KCNQ3O43525 872 aa11.31□□□□□ -0.6
HLA-DOA-201ENST00000229829 RASEFQ8IZ41 740 aa11.31□□□□□ -0.6
HLA-DOA-201ENST00000229829 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
HLA-DOA-201ENST00000229829 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
HLA-DOA-201ENST00000229829 SRGAP3O43295 1099 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 CPA1P15085 419 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 HSPA4P34932 840 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 ABTB2Q8N961 1025 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 INTS4Q96HW7 963 aaKnown RBP11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 TTC12Q9H892 705 aaPredicted RBP11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 RGPD5Q99666 1765 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 MAP3K5Q99683 1374 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 RHPN1Q8TCX5 695 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 SRCIN1Q9C0H9 1055 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
HLA-DOA-201ENST00000229829 MBD3O95983 291 aa11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 KIF3AQ9Y496 699 aa11.29□□□□□ -0.6
HLA-DOA-201ENST00000229829 EID1Q9Y6B2 187 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms