RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 PKD1L3Q7Z443 1732 aa20.71■□□□□ 0.91
GAPDH-201ENST00000229239 DDX58O95786 925 aaKnown RBP20.71■□□□□ 0.91
GAPDH-201ENST00000229239 MX1P20591 662 aa20.71■□□□□ 0.91
GAPDH-201ENST00000229239 RABEP1Q15276 862 aa20.71■□□□□ 0.91
GAPDH-201ENST00000229239 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
GAPDH-201ENST00000229239 CIZ1Q9ULV3 898 aaPredicted RBP20.71■□□□□ 0.91
GAPDH-201ENST00000229239 MTX1Q13505 466 aa20.7■□□□□ 0.9
GAPDH-201ENST00000229239 ZNF790Q6PG37 636 aa20.7■□□□□ 0.9
GAPDH-201ENST00000229239 DCAF5Q96JK2 942 aa20.7■□□□□ 0.9
GAPDH-201ENST00000229239 USP26Q9BXU7 913 aa20.7■□□□□ 0.9
GAPDH-201ENST00000229239 PPP1R42Q7Z4L9 355 aa20.69■□□□□ 0.9
GAPDH-201ENST00000229239 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
GAPDH-201ENST00000229239 GSE1Q14687 1217 aa20.69■□□□□ 0.9
GAPDH-201ENST00000229239 ERC2O15083 957 aa20.68■□□□□ 0.9
GAPDH-201ENST00000229239 TRIM37O94972 964 aa20.68■□□□□ 0.9
GAPDH-201ENST00000229239 BAG6P46379 1132 aa20.68■□□□□ 0.9
GAPDH-201ENST00000229239 EXOC5O00471 708 aa20.67■□□□□ 0.9
GAPDH-201ENST00000229239 MAP3K2Q9Y2U5 619 aa20.67■□□□□ 0.9
GAPDH-201ENST00000229239 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
GAPDH-201ENST00000229239 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
GAPDH-201ENST00000229239 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
GAPDH-201ENST00000229239 DDIT3P35638 169 aa20.67■□□□□ 0.9
GAPDH-201ENST00000229239 LINS1Q8NG48 757 aa20.67■□□□□ 0.9
GAPDH-201ENST00000229239 KIF1BPQ96EK5 621 aa20.67■□□□□ 0.9
GAPDH-201ENST00000229239 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
GAPDH-201ENST00000229239 EPB41L2O43491 1005 aaKnown RBP20.66■□□□□ 0.9
GAPDH-201ENST00000229239 SURF6O75683 361 aaKnown RBP20.65■□□□□ 0.9
GAPDH-201ENST00000229239 IL2RBP14784 551 aa20.65■□□□□ 0.9
GAPDH-201ENST00000229239 TUBGCP6Q96RT7 1819 aa20.65■□□□□ 0.9
GAPDH-201ENST00000229239 UTYO14607 1347 aa20.65■□□□□ 0.9
GAPDH-201ENST00000229239 ANXA1P04083 346 aa20.64■□□□□ 0.89
GAPDH-201ENST00000229239 MARCH10Q8NA82 808 aaPredicted RBP20.64■□□□□ 0.89
GAPDH-201ENST00000229239 RHPN1Q8TCX5 695 aa20.64■□□□□ 0.89
GAPDH-201ENST00000229239 PDIA6Q15084 440 aa20.63■□□□□ 0.89
GAPDH-201ENST00000229239 PROSER3Q2NL68 480 aa20.63■□□□□ 0.89
GAPDH-201ENST00000229239 BCL11AQ9H165 835 aa20.63■□□□□ 0.89
GAPDH-201ENST00000229239 C9orf78Q9NZ63 289 aaPredicted RBP20.63■□□□□ 0.89
GAPDH-201ENST00000229239 SBF2Q86WG5 1849 aa20.63■□□□□ 0.89
GAPDH-201ENST00000229239 EN1Q05925 392 aaPredicted RBP20.62■□□□□ 0.89
GAPDH-201ENST00000229239 NFATC2IPQ8NCF5 419 aa20.62■□□□□ 0.89
GAPDH-201ENST00000229239 CYP27B1O15528 508 aa20.62■□□□□ 0.89
GAPDH-201ENST00000229239 APBA3O96018 575 aa20.62■□□□□ 0.89
GAPDH-201ENST00000229239 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
GAPDH-201ENST00000229239 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
GAPDH-201ENST00000229239 SRCAPQ6ZRS2 3230 aa20.61■□□□□ 0.89
GAPDH-201ENST00000229239 ERC1Q8IUD2 1116 aa20.61■□□□□ 0.89
GAPDH-201ENST00000229239 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
GAPDH-201ENST00000229239 PRAMEF22A3QJZ6 481 aa20.6■□□□□ 0.89
GAPDH-201ENST00000229239 SPRYD3Q8NCJ5 442 aa20.6■□□□□ 0.89
GAPDH-201ENST00000229239 FMNL2Q96PY5 1086 aa20.6■□□□□ 0.89
GAPDH-201ENST00000229239 GRM8O00222 908 aa20.6■□□□□ 0.89
GAPDH-201ENST00000229239 ESYT1Q9BSJ8 1104 aa20.6■□□□□ 0.89
GAPDH-201ENST00000229239 C5P01031 1676 aa20.6■□□□□ 0.89
GAPDH-201ENST00000229239 PTMSP20962 102 aa20.59■□□□□ 0.89
GAPDH-201ENST00000229239 TTC41PQ6P2S7 1318 aa20.59■□□□□ 0.89
GAPDH-201ENST00000229239 PCDH11XQ9BZA7 1347 aa20.59■□□□□ 0.89
GAPDH-201ENST00000229239 PCDH11YQ9BZA8 1340 aa20.59■□□□□ 0.89
GAPDH-201ENST00000229239 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
GAPDH-201ENST00000229239 MCCP23508 829 aa20.58■□□□□ 0.89
GAPDH-201ENST00000229239 MCM4P33991 863 aa20.58■□□□□ 0.89
GAPDH-201ENST00000229239 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
GAPDH-201ENST00000229239 SLC39A6Q13433 755 aa20.58■□□□□ 0.89
GAPDH-201ENST00000229239 TNS2Q63HR2 1409 aa20.58■□□□□ 0.89
GAPDH-201ENST00000229239 ERBB4Q15303 1308 aa20.58■□□□□ 0.88
GAPDH-201ENST00000229239 ST18O60284 1047 aa20.58■□□□□ 0.88
GAPDH-201ENST00000229239 CHMLP26374 656 aa20.58■□□□□ 0.88
GAPDH-201ENST00000229239 ZNF496Q96IT1 587 aaPredicted RBP20.58■□□□□ 0.88
GAPDH-201ENST00000229239 TRIM6-TRIM34B2RNG4 842 aa20.57■□□□□ 0.88
GAPDH-201ENST00000229239 CABP4P57796 275 aa20.57■□□□□ 0.88
GAPDH-201ENST00000229239 RIC3Q7Z5B4 369 aa20.57■□□□□ 0.88
GAPDH-201ENST00000229239 IL1RAPL2Q9NP60 686 aa20.57■□□□□ 0.88
GAPDH-201ENST00000229239 BCL9O00512 1426 aa20.56■□□□□ 0.88
GAPDH-201ENST00000229239 DDX11L8A8MPP1 907 aa20.56■□□□□ 0.88
GAPDH-201ENST00000229239 CD2BP2O95400 341 aaKnown RBP20.56■□□□□ 0.88
GAPDH-201ENST00000229239 ANAPC15P60006 121 aa20.56■□□□□ 0.88
GAPDH-201ENST00000229239 EZH2Q15910 746 aaKnown RBP20.56■□□□□ 0.88
GAPDH-201ENST00000229239 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
GAPDH-201ENST00000229239 CAMKK2Q96RR4 588 aa20.56■□□□□ 0.88
GAPDH-201ENST00000229239 RBM42Q9BTD8 480 aaKnown RBP20.56■□□□□ 0.88
GAPDH-201ENST00000229239 RREB1Q92766 1687 aa20.56■□□□□ 0.88
GAPDH-201ENST00000229239 METTL22Q9BUU2 404 aaPredicted RBP20.56■□□□□ 0.88
GAPDH-201ENST00000229239 MCM2P49736 904 aa20.55■□□□□ 0.88
GAPDH-201ENST00000229239 CWF19L2Q2TBE0 894 aaKnown RBP20.55■□□□□ 0.88
GAPDH-201ENST00000229239 CLASRPQ8N2M8 674 aaKnown RBP20.55■□□□□ 0.88
GAPDH-201ENST00000229239 PI4K2BQ8TCG2 481 aa20.55■□□□□ 0.88
GAPDH-201ENST00000229239 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
GAPDH-201ENST00000229239 BCL11BQ9C0K0 894 aaPredicted RBP20.55■□□□□ 0.88
GAPDH-201ENST00000229239 LAMB4A4D0S4 1761 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 COL15A1P39059 1388 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 RAB3GAP1Q15042 981 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 NKX1-1Q15270 411 aaPredicted RBP20.54■□□□□ 0.88
GAPDH-201ENST00000229239 TSHZ3Q63HK5 1081 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 ZCRB1Q8TBF4 217 aaKnown RBP20.54■□□□□ 0.88
GAPDH-201ENST00000229239 OS9Q13438 667 aaPredicted RBP20.54■□□□□ 0.88
GAPDH-201ENST00000229239 LRP10Q7Z4F1 713 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 NUTM1Q86Y26 1132 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 GPATCH3Q96I76 525 aa20.54■□□□□ 0.88
GAPDH-201ENST00000229239 GBP4Q96PP9 640 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms