RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CLASRPQ8N2M8 674 aaKnown RBP19.63■□□□□ 0.73
LTBR-201ENST00000228918 SYAP1Q96A49 352 aaPredicted RBP19.63■□□□□ 0.73
LTBR-201ENST00000228918 GIGYF1O75420 1035 aaPredicted RBP19.62■□□□□ 0.73
LTBR-201ENST00000228918 PROSER3Q2NL68 480 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 SPG7Q9UQ90 795 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 KSR2Q6VAB6 950 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 ARHGEF25Q86VW2 580 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 ANKLE2Q86XL3 938 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 TMEM87AQ8NBN3 555 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
LTBR-201ENST00000228918 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
LTBR-201ENST00000228918 LMTK3Q96Q04 1460 aa19.61■□□□□ 0.73
LTBR-201ENST00000228918 GADD45BO75293 160 aaPredicted RBP19.61■□□□□ 0.73
LTBR-201ENST00000228918 GDPD2Q9HCC8 539 aa19.61■□□□□ 0.73
LTBR-201ENST00000228918 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
LTBR-201ENST00000228918 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
LTBR-201ENST00000228918 NOL7Q9UMY1 257 aaKnown RBP19.61■□□□□ 0.73
LTBR-201ENST00000228918 LIMCH1Q9UPQ0 1083 aa19.61■□□□□ 0.73
LTBR-201ENST00000228918 FOXD4L6Q3SYB3 417 aaPredicted RBP19.6■□□□□ 0.73
LTBR-201ENST00000228918 FOXD4L3Q6VB84 417 aaPredicted RBP19.6■□□□□ 0.73
LTBR-201ENST00000228918 USP48Q86UV5 1035 aa19.6■□□□□ 0.73
LTBR-201ENST00000228918 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
LTBR-201ENST00000228918 RUFY2Q8WXA3 655 aa19.6■□□□□ 0.73
LTBR-201ENST00000228918 TSPY26PQ9H489 355 aa19.6■□□□□ 0.73
LTBR-201ENST00000228918 GCP02774 474 aa19.59■□□□□ 0.73
LTBR-201ENST00000228918 GPATCH3Q96I76 525 aa19.59■□□□□ 0.73
LTBR-201ENST00000228918 PA2G4Q9UQ80 394 aaKnown RBP19.59■□□□□ 0.73
LTBR-201ENST00000228918 CWF19L2Q2TBE0 894 aaKnown RBP19.59■□□□□ 0.73
LTBR-201ENST00000228918 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.59■□□□□ 0.73
LTBR-201ENST00000228918 HDAC5Q9UQL6 1122 aa19.59■□□□□ 0.73
LTBR-201ENST00000228918 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
LTBR-201ENST00000228918 OFD1O75665 1012 aa19.58■□□□□ 0.73
LTBR-201ENST00000228918 ZSCAN22P10073 491 aaPredicted RBP19.58■□□□□ 0.73
LTBR-201ENST00000228918 CASTP20810 708 aaKnown RBP19.58■□□□□ 0.73
LTBR-201ENST00000228918 ANKRD24Q8TF21 1146 aa19.58■□□□□ 0.73
LTBR-201ENST00000228918 PRAMEF22A3QJZ6 481 aa19.58■□□□□ 0.72
LTBR-201ENST00000228918 PHF14O94880 888 aa19.58■□□□□ 0.72
LTBR-201ENST00000228918 PTH1RQ03431 593 aa19.58■□□□□ 0.72
LTBR-201ENST00000228918 RNF214Q8ND24 703 aa19.58■□□□□ 0.72
LTBR-201ENST00000228918 HYPKQ9NX55 129 aa19.58■□□□□ 0.72
LTBR-201ENST00000228918 TRPM3Q9HCF6 1732 aaPredicted RBP19.57■□□□□ 0.72
LTBR-201ENST00000228918 IFIT2P09913 472 aaKnown RBP19.57■□□□□ 0.72
LTBR-201ENST00000228918 KCNB2Q92953 911 aa19.57■□□□□ 0.72
LTBR-201ENST00000228918 UTYO14607 1347 aa19.57■□□□□ 0.72
LTBR-201ENST00000228918 STX6O43752 255 aa19.56■□□□□ 0.72
LTBR-201ENST00000228918 CPA1P15085 419 aa19.56■□□□□ 0.72
LTBR-201ENST00000228918 SYT1P21579 422 aa19.56■□□□□ 0.72
LTBR-201ENST00000228918 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
LTBR-201ENST00000228918 LARP6Q9BRS8 491 aaKnown RBP19.56■□□□□ 0.72
LTBR-201ENST00000228918 ZNF500O60304 480 aaPredicted RBP19.56■□□□□ 0.72
LTBR-201ENST00000228918 LARGE1O95461 756 aa19.56■□□□□ 0.72
LTBR-201ENST00000228918 EVI5LQ96CN4 794 aa19.56■□□□□ 0.72
LTBR-201ENST00000228918 GRM8O00222 908 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 TPM2P07951 284 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 VPS53Q5VIR6 699 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.55■□□□□ 0.72
LTBR-201ENST00000228918 AACSQ86V21 672 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 KAZALD1Q96I82 304 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 TM6SF1Q9BZW5 370 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 CNPY2Q9Y2B0 182 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 ZKSCAN5Q9Y2L8 839 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 PRPF40BQ6NWY9 871 aaKnown RBP19.55■□□□□ 0.72
LTBR-201ENST00000228918 ORAI2Q96SN7 254 aa19.55■□□□□ 0.72
LTBR-201ENST00000228918 RGPD5Q99666 1765 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 CCDC171Q6TFL3 1326 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 F13A1P00488 732 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 XPCQ01831 940 aaPredicted RBP19.54■□□□□ 0.72
LTBR-201ENST00000228918 ADCK5Q3MIX3 580 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 JAKMIP1Q96N16 626 aaKnown RBP19.54■□□□□ 0.72
LTBR-201ENST00000228918 ZSWIM6Q9HCJ5 1215 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 C5P01031 1676 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
LTBR-201ENST00000228918 CCDC39Q9UFE4 941 aa19.54■□□□□ 0.72
LTBR-201ENST00000228918 SASH1O94885 1247 aa19.53■□□□□ 0.72
LTBR-201ENST00000228918 DDX58O95786 925 aaKnown RBP19.53■□□□□ 0.72
LTBR-201ENST00000228918 BICC1Q9H694 974 aaKnown RBP19.53■□□□□ 0.72
LTBR-201ENST00000228918 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
LTBR-201ENST00000228918 MCM5P33992 734 aa19.53■□□□□ 0.72
LTBR-201ENST00000228918 NECTIN1Q15223 517 aa19.53■□□□□ 0.72
LTBR-201ENST00000228918 CCDC183Q5T5S1 534 aa19.53■□□□□ 0.72
LTBR-201ENST00000228918 SH2B1Q9NRF2 756 aaPredicted RBP19.53■□□□□ 0.72
LTBR-201ENST00000228918 PDIA6Q15084 440 aa19.52■□□□□ 0.72
LTBR-201ENST00000228918 CCDC83Q8IWF9 413 aa19.52■□□□□ 0.72
LTBR-201ENST00000228918 ZSCAN31Q96LW9 406 aaPredicted RBP19.52■□□□□ 0.72
LTBR-201ENST00000228918 AXIN2Q9Y2T1 843 aa19.52■□□□□ 0.72
LTBR-201ENST00000228918 CYP46A1Q9Y6A2 500 aa19.52■□□□□ 0.72
LTBR-201ENST00000228918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.52■□□□□ 0.72
LTBR-201ENST00000228918 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.71
LTBR-201ENST00000228918 UBE2HP62256 183 aa19.51■□□□□ 0.71
LTBR-201ENST00000228918 EAF2Q96CJ1 260 aaPredicted RBP19.51■□□□□ 0.71
LTBR-201ENST00000228918 ATP6V1DQ9Y5K8 247 aa19.51■□□□□ 0.71
LTBR-201ENST00000228918 MRC1P22897 1456 aa19.51■□□□□ 0.71
LTBR-201ENST00000228918 HIP1O00291 1037 aa19.51■□□□□ 0.71
LTBR-201ENST00000228918 GJB2P29033 226 aa19.51■□□□□ 0.71
LTBR-201ENST00000228918 SNRKQ9NRH2 765 aa19.51■□□□□ 0.71
LTBR-201ENST00000228918 ST3GAL1Q11201 340 aa19.5■□□□□ 0.71
LTBR-201ENST00000228918 G3BP1Q13283 466 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms