RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.32
PRDM4-201ENST00000228437 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
PRDM4-201ENST00000228437 ATP8B2P98198 1209 aa17.08■□□□□ 0.32
PRDM4-201ENST00000228437 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.32
PRDM4-201ENST00000228437 ATP10AO60312 1499 aa17.08■□□□□ 0.32
PRDM4-201ENST00000228437 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
PRDM4-201ENST00000228437 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
PRDM4-201ENST00000228437 MTMR6Q9Y217 621 aa17.07■□□□□ 0.32
PRDM4-201ENST00000228437 LMAN1P49257 510 aa17.07■□□□□ 0.32
PRDM4-201ENST00000228437 FSIP1Q8NA03 581 aa17.07■□□□□ 0.32
PRDM4-201ENST00000228437 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
PRDM4-201ENST00000228437 NUDT16Q96DE0 195 aaKnown RBP17.07■□□□□ 0.32
PRDM4-201ENST00000228437 AP5Z1O43299 807 aa17.07■□□□□ 0.32
PRDM4-201ENST00000228437 GLRX3O76003 335 aaKnown RBP17.07■□□□□ 0.32
PRDM4-201ENST00000228437 NR1I2O75469 434 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 ATP2B1P20020 1258 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 HSPA4P34932 840 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 GABPB1Q06547 395 aaPredicted RBP17.06■□□□□ 0.32
PRDM4-201ENST00000228437 HSP90AB4PQ58FF6 505 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 ZNF330Q9Y3S2 320 aaPredicted RBP17.06■□□□□ 0.32
PRDM4-201ENST00000228437 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 BRF1Q92994 677 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 MRVI1Q9Y6F6 885 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 ME3Q16798 604 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 GOLGA6L1Q8N7Z2 621 aa17.06■□□□□ 0.32
PRDM4-201ENST00000228437 IL13P35225 146 aa17.05■□□□□ 0.32
PRDM4-201ENST00000228437 PTH1RQ03431 593 aa17.05■□□□□ 0.32
PRDM4-201ENST00000228437 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
PRDM4-201ENST00000228437 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
PRDM4-201ENST00000228437 CPLX1O14810 134 aa17.05■□□□□ 0.32
PRDM4-201ENST00000228437 PTPN21Q16825 1174 aa17.05■□□□□ 0.32
PRDM4-201ENST00000228437 SGSM2O43147 1006 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
PRDM4-201ENST00000228437 SYNE3Q6ZMZ3 975 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 IL25Q9H293 177 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 CFAP45Q9UL16 551 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 USP27XA6NNY8 438 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
PRDM4-201ENST00000228437 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 LMOD1P29536 600 aaPredicted RBP17.04■□□□□ 0.32
PRDM4-201ENST00000228437 JAK2O60674 1132 aa17.04■□□□□ 0.32
PRDM4-201ENST00000228437 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
PRDM4-201ENST00000228437 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
PRDM4-201ENST00000228437 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
PRDM4-201ENST00000228437 CTNNA3Q9UI47 895 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 SPTLC3Q9NUV7 552 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 ANO10Q9NW15 660 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 CCDC171Q6TFL3 1326 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 FBXO38Q6PIJ6 1188 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
PRDM4-201ENST00000228437 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
PRDM4-201ENST00000228437 RAD50Q92878 1312 aa17.02■□□□□ 0.32
PRDM4-201ENST00000228437 NLRP6P59044 892 aa17.02■□□□□ 0.31
PRDM4-201ENST00000228437 STX1AQ16623 288 aa17.02■□□□□ 0.31
PRDM4-201ENST00000228437 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.31
PRDM4-201ENST00000228437 RIMS2Q9UQ26 1411 aa17.02■□□□□ 0.31
PRDM4-201ENST00000228437 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 LEKR1Q6ZMV7 388 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 CCDC144CPQ8IYA2 1237 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 LEO1Q8WVC0 666 aaPredicted RBP17.01■□□□□ 0.31
PRDM4-201ENST00000228437 IFNKQ9P0W0 207 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 MCM6Q14566 821 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 TERF2Q15554 542 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
PRDM4-201ENST00000228437 CHST3Q7LGC8 479 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 ANKRD1Q15327 319 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 KRBA2Q6ZNG9 492 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 ECHDC1Q9NTX5 307 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 CWC15Q9P013 229 aaKnown RBP17.01■□□□□ 0.31
PRDM4-201ENST00000228437 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
PRDM4-201ENST00000228437 PHACTR2O75167 634 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 KMT5BQ4FZB7 885 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 ERO1AQ96HE7 468 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
PRDM4-201ENST00000228437 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
PRDM4-201ENST00000228437 HSP90B2PQ58FF3 399 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 AK7Q96M32 723 aa17■□□□□ 0.31
PRDM4-201ENST00000228437 FTOQ9C0B1 505 aaKnown RBP eCLIP17■□□□□ 0.315e-6■□□□□ 8.8
PRDM4-201ENST00000228437 DDX41Q9UJV9 622 aaKnown RBP17■□□□□ 0.31
PRDM4-201ENST00000228437 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
PRDM4-201ENST00000228437 GNG11P61952 73 aa16.99■□□□□ 0.31
PRDM4-201ENST00000228437 RGS12O14924 1447 aa16.99■□□□□ 0.31
PRDM4-201ENST00000228437 PLCH2O75038 1416 aa16.99■□□□□ 0.31
PRDM4-201ENST00000228437 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
PRDM4-201ENST00000228437 CHL1O00533 1208 aa16.99■□□□□ 0.31
PRDM4-201ENST00000228437 A0A1B0GVL5 298 aa16.98■□□□□ 0.31
PRDM4-201ENST00000228437 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
PRDM4-201ENST00000228437 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
PRDM4-201ENST00000228437 SEC31AO94979 1220 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms