RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SIRT2Q8IXJ6 389 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 INSRP06213 1382 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 ERBB4Q15303 1308 aa16.12■□□□□ 0.17
NFKB1-201ENST00000226574 PROSER2Q86WR7 435 aaPredicted RBP16.12■□□□□ 0.17
NFKB1-201ENST00000226574 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
NFKB1-201ENST00000226574 ANKRD20A12PQ8NF67 263 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 KIF18AQ8NI77 898 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 ZBTB3Q9H5J0 574 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 ITSN2Q9NZM3 1697 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
NFKB1-201ENST00000226574 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
NFKB1-201ENST00000226574 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
NFKB1-201ENST00000226574 C8orf76Q96K31 380 aa16.1■□□□□ 0.17
NFKB1-201ENST00000226574 WDR7Q9Y4E6 1490 aa16.1■□□□□ 0.17
NFKB1-201ENST00000226574 IFIT1P09914 478 aaKnown RBP16.1■□□□□ 0.17
NFKB1-201ENST00000226574 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
NFKB1-201ENST00000226574 TYRO3Q06418 890 aa16.1■□□□□ 0.17
NFKB1-201ENST00000226574 ZNF445P59923 1031 aa16.1■□□□□ 0.17
NFKB1-201ENST00000226574 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
NFKB1-201ENST00000226574 FAM200AQ8TCP9 573 aa16.1■□□□□ 0.17
NFKB1-201ENST00000226574 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
NFKB1-201ENST00000226574 ATF3P18847 181 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
NFKB1-201ENST00000226574 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
NFKB1-201ENST00000226574 ANAPC15P60006 121 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 DDX19AQ9NUU7 478 aaKnown RBP16.09■□□□□ 0.17
NFKB1-201ENST00000226574 ANO10Q9NW15 660 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 KAT6BQ8WYB5 2073 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 SKILP12757 684 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 GCC2Q8IWJ2 1684 aa16.09■□□□□ 0.17
NFKB1-201ENST00000226574 ADAMTS12P58397 1594 aa16.08■□□□□ 0.17
NFKB1-201ENST00000226574 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.17
NFKB1-201ENST00000226574 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.17
NFKB1-201ENST00000226574 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.16
NFKB1-201ENST00000226574 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
NFKB1-201ENST00000226574 CCDC66A2RUB6 948 aa16.08■□□□□ 0.16
NFKB1-201ENST00000226574 UVSSAQ2YD98 709 aa16.08■□□□□ 0.16
NFKB1-201ENST00000226574 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
NFKB1-201ENST00000226574 UNC5CLQ8IV45 518 aa16.08■□□□□ 0.16
NFKB1-201ENST00000226574 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
NFKB1-201ENST00000226574 JMYQ8N9B5 988 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 PRIMPOLQ96LW4 560 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 FAM227BQ96M60 508 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 PLA2R1Q13018 1463 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 CHL1O00533 1208 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 EDC3Q96F86 508 aaKnown RBP16.07■□□□□ 0.16
NFKB1-201ENST00000226574 COPS6Q7L5N1 327 aa16.07■□□□□ 0.16
NFKB1-201ENST00000226574 GOLGA8BA8MQT2 603 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 CEP135Q66GS9 1140 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 Q6ZUG5 572 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 LMOD1P29536 600 aaPredicted RBP16.06■□□□□ 0.16
NFKB1-201ENST00000226574 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
NFKB1-201ENST00000226574 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
NFKB1-201ENST00000226574 CAGE1Q8TC20 777 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 PATL2C9JE40 543 aaKnown RBP16.06■□□□□ 0.16
NFKB1-201ENST00000226574 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 ABCF2Q9UG63 623 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 PHF8Q9UPP1 1060 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
NFKB1-201ENST00000226574 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
NFKB1-201ENST00000226574 IMMTQ16891 758 aaKnown RBP16.05■□□□□ 0.16
NFKB1-201ENST00000226574 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 ORC3Q9UBD5 711 aaPredicted RBP16.05■□□□□ 0.16
NFKB1-201ENST00000226574 SOS1Q07889 1333 aaPredicted RBP16.05■□□□□ 0.16
NFKB1-201ENST00000226574 PIK3R4Q99570 1358 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
NFKB1-201ENST00000226574 PPFIBP1Q86W92 1011 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 AOPEPQ8N6M6 819 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 FAM193AP78312 1265 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 XAGE3Q8WTP9 111 aa16.05■□□□□ 0.16
NFKB1-201ENST00000226574 INTS4Q96HW7 963 aaKnown RBP16.05■□□□□ 0.16
NFKB1-201ENST00000226574 GPTP24298 496 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 U2AF2P26368 475 aaKnown RBP eCLIP16.04■□□□□ 0.16
NFKB1-201ENST00000226574 GTF2F1P35269 517 aaKnown RBP eCLIP16.04■□□□□ 0.16
NFKB1-201ENST00000226574 CCDC69A6NI79 296 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 HS1BP3Q53T59 392 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 BRD1O95696 1058 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
NFKB1-201ENST00000226574 TMCO3Q6UWJ1 677 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 DHX37Q8IY37 1157 aaKnown RBP16.04■□□□□ 0.16
NFKB1-201ENST00000226574 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
NFKB1-201ENST00000226574 TDO2P48775 406 aa16.03■□□□□ 0.16
NFKB1-201ENST00000226574 AXDND1Q5T1B0 1012 aaPredicted RBP16.03■□□□□ 0.16
NFKB1-201ENST00000226574 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
NFKB1-201ENST00000226574 APOBRQ0VD83 1088 aa16.03■□□□□ 0.16
NFKB1-201ENST00000226574 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
NFKB1-201ENST00000226574 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
NFKB1-201ENST00000226574 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms