RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 TTLL6Q8N841 843 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 ZBTB1Q9Y2K1 713 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 IL16Q14005 1332 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 FAM208AQ9UK61 1670 aaKnown RBP6.62□□□□□ -1.35
RUFY3-201ENST00000226328 COPS6Q7L5N1 327 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 BCL2L13Q9BXK5 485 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 SRCIN1Q9C0H9 1055 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 CNNM1Q9NRU3 951 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 ANKIB1Q9P2G1 1089 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 HEG1Q9ULI3 1381 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 PEAK1Q9H792 1746 aa6.62□□□□□ -1.35
RUFY3-201ENST00000226328 YY1P25490 414 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 GRIPAP1Q4V328 841 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 IL17REQ8NFR9 667 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 XAGE3Q8WTP9 111 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
RUFY3-201ENST00000226328 SH3TC1Q8TE82 1336 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 GNL3LQ9NVN8 582 aaKnown RBP6.61□□□□□ -1.35
RUFY3-201ENST00000226328 WDHD1O75717 1129 aaPredicted RBP6.61□□□□□ -1.35
RUFY3-201ENST00000226328 RTL5Q5HYW3 569 aaPredicted RBP6.61□□□□□ -1.35
RUFY3-201ENST00000226328 MYD88Q99836 296 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 PARP4Q9UKK3 1724 aaKnown RBP6.61□□□□□ -1.35
RUFY3-201ENST00000226328 TGFB2P61812 414 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 EXOSC9Q06265 439 aaKnown RBP6.61□□□□□ -1.35
RUFY3-201ENST00000226328 TMC4Q7Z404 712 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 MIER1Q8N108 512 aa6.61□□□□□ -1.35
RUFY3-201ENST00000226328 GNAI3P08754 354 aa6.6□□□□□ -1.35
RUFY3-201ENST00000226328 RGPD5Q99666 1765 aa6.6□□□□□ -1.35
RUFY3-201ENST00000226328 KDM2BQ8NHM5 1336 aa6.6□□□□□ -1.35
RUFY3-201ENST00000226328 UBTFL1P0CB47 393 aaPredicted RBP6.6□□□□□ -1.35
RUFY3-201ENST00000226328 COL23A1Q86Y22 540 aaPredicted RBP6.6□□□□□ -1.35
RUFY3-201ENST00000226328 ERVV-1B6SEH8 477 aa6.6□□□□□ -1.35
RUFY3-201ENST00000226328 CCDC93Q567U6 631 aa6.6□□□□□ -1.35
RUFY3-201ENST00000226328 ANKRD18AQ8IVF6 992 aa6.6□□□□□ -1.35
RUFY3-201ENST00000226328 ZC3H12CQ9C0D7 883 aaKnown RBP6.6□□□□□ -1.35
RUFY3-201ENST00000226328 GPBP1L1Q9HC44 474 aaPredicted RBP6.6□□□□□ -1.35
RUFY3-201ENST00000226328 NIM1KQ8IY84 436 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 LARGE2Q8N3Y3 721 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 PLBD2Q8NHP8 589 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 TMOD2Q9NZR1 351 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 COL15A1P39059 1388 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 MEGF6O75095 1541 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 ANKRD18BA2A2Z9 1011 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 CCT4P50991 539 aaKnown RBP6.59□□□□□ -1.35
RUFY3-201ENST00000226328 IFIT5Q13325 482 aaKnown RBP6.59□□□□□ -1.35
RUFY3-201ENST00000226328 ZKSCAN2Q63HK3 967 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 ITPRIPQ8IWB1 547 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 RTKN2Q8IZC4 609 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 DNAAF4Q8WXU2 420 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 FHDC1Q9C0D6 1143 aaPredicted RBP6.59□□□□□ -1.35
RUFY3-201ENST00000226328 NPR1P16066 1061 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 EIF4A1P60842 406 aaKnown RBP6.59□□□□□ -1.35
RUFY3-201ENST00000226328 G3BP1Q13283 466 aaKnown RBP eCLIP6.59□□□□□ -1.35
RUFY3-201ENST00000226328 CCDC27Q2M243 656 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 TSR2Q969E8 191 aaKnown RBP6.59□□□□□ -1.35
RUFY3-201ENST00000226328 HDAC9Q9UKV0 1011 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 KDRP35968 1356 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 CARMIL3Q8ND23 1372 aa6.59□□□□□ -1.35
RUFY3-201ENST00000226328 BRWD3Q6RI45 1802 aa6.59□□□□□ -1.36
RUFY3-201ENST00000226328 LRRC37A3O60309 1634 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 GIGYF1O75420 1035 aaPredicted RBP6.58□□□□□ -1.36
RUFY3-201ENST00000226328 CYP19A1P11511 503 aaPredicted RBP6.58□□□□□ -1.36
RUFY3-201ENST00000226328 HSP90AB4PQ58FF6 505 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 LINC00116Q8NCU8 138 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 MASTLQ96GX5 879 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 GPATCH3Q96I76 525 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 CHPF2Q9P2E5 772 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 SRP68Q9UHB9 627 aaKnown RBP6.58□□□□□ -1.36
RUFY3-201ENST00000226328 MAP3K15Q6ZN16 1313 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 PLIN1O60240 522 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 OGFOD1Q8N543 542 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 TRIM34Q9BYJ4 488 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 MBIPQ9NS73 344 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 USP16Q9Y5T5 823 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 BEGAINQ9BUH8 593 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 BRIP1Q9BX63 1249 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 NF2P35240 595 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 PIP4K2AP48426 406 aaPredicted RBP6.58□□□□□ -1.36
RUFY3-201ENST00000226328 DPP8Q6V1X1 898 aaPredicted RBP6.58□□□□□ -1.36
RUFY3-201ENST00000226328 KSR2Q6VAB6 950 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 TAOK3Q9H2K8 898 aa6.58□□□□□ -1.36
RUFY3-201ENST00000226328 BCL9O00512 1426 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 SHANK3Q9BYB0 1731 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 ATP5J2-PTCD1G3V325 749 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 RNF123Q5XPI4 1314 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 RGPD1P0DJD0 1748 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 CHL1O00533 1208 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 IRS4O14654 1257 aaPredicted RBP6.57□□□□□ -1.36
RUFY3-201ENST00000226328 FLIIQ13045 1269 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 LRRFIP1Q32MZ4 808 aaKnown RBP6.57□□□□□ -1.36
RUFY3-201ENST00000226328 CCDC191Q8NCU4 936 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 ZNF526Q8TF50 670 aaPredicted RBP6.57□□□□□ -1.36
RUFY3-201ENST00000226328 ANKRD2Q9GZV1 360 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 ANO8Q9HCE9 1232 aaPredicted RBP6.57□□□□□ -1.36
RUFY3-201ENST00000226328 RNF181Q9P0P0 153 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
RUFY3-201ENST00000226328 MAP3K2Q9Y2U5 619 aa6.57□□□□□ -1.36
RUFY3-201ENST00000226328 MYO1BO43795 1136 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms