RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 TCOF1Q13428 1488 aaKnown RBP18.82■□□□□ 0.6
HDAC5-201ENST00000225983 POLR3DP05423 398 aaPredicted RBP18.81■□□□□ 0.6
HDAC5-201ENST00000225983 UBXN4Q92575 508 aa18.81■□□□□ 0.6
HDAC5-201ENST00000225983 CWC25Q9NXE8 425 aaPredicted RBP18.81■□□□□ 0.6
HDAC5-201ENST00000225983 CCDC196A0A1B0GTZ2 297 aa18.81■□□□□ 0.6
HDAC5-201ENST00000225983 MPHOSPH10O00566 681 aaKnown RBP18.81■□□□□ 0.6
HDAC5-201ENST00000225983 ADCY5O95622 1261 aa18.81■□□□□ 0.6
HDAC5-201ENST00000225983 DDX46Q7L014 1031 aaKnown RBP18.81■□□□□ 0.6
HDAC5-201ENST00000225983 KRT24Q2M2I5 525 aa18.81■□□□□ 0.6
HDAC5-201ENST00000225983 KIAA1328Q86T90 577 aa18.81■□□□□ 0.6
HDAC5-201ENST00000225983 SEPT11Q9NVA2 429 aaKnown RBP18.81■□□□□ 0.6
HDAC5-201ENST00000225983 DDX19AQ9NUU7 478 aaKnown RBP18.81■□□□□ 0.6
HDAC5-201ENST00000225983 TRAPPC8Q9Y2L5 1435 aa18.81■□□□□ 0.6
HDAC5-201ENST00000225983 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 SSRP1Q08945 709 aaKnown RBP18.8■□□□□ 0.6
HDAC5-201ENST00000225983 LDHAL6AQ6ZMR3 332 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 CTCFLQ8NI51 663 aaPredicted RBP18.8■□□□□ 0.6
HDAC5-201ENST00000225983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.8■□□□□ 0.65e-9■■■■■ 154.1
HDAC5-201ENST00000225983 TRMT1Q9NXH9 659 aaKnown RBP18.8■□□□□ 0.6
HDAC5-201ENST00000225983 ADAMTS2O95450 1211 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 ZNF76P36508 570 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
HDAC5-201ENST00000225983 ESYT1Q9BSJ8 1104 aa18.8■□□□□ 0.6
HDAC5-201ENST00000225983 RRP9O43818 475 aaKnown RBP18.8■□□□□ 0.6
HDAC5-201ENST00000225983 CNNM3Q8NE01 707 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
HDAC5-201ENST00000225983 ANKIB1Q9P2G1 1089 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 TOP1P11387 765 aaKnown RBP18.79■□□□□ 0.6
HDAC5-201ENST00000225983 DZIP1Q86YF9 867 aaKnown RBP18.79■□□□□ 0.6
HDAC5-201ENST00000225983 TSPYL1Q9H0U9 437 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 ZPR1O75312 459 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 CTAGE5O15320 804 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 C16orf45Q96MC5 204 aaPredicted RBP18.79■□□□□ 0.6
HDAC5-201ENST00000225983 CENPHQ9H3R5 247 aa18.79■□□□□ 0.6
HDAC5-201ENST00000225983 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 SEC63Q9UGP8 760 aaKnown RBP18.78■□□□□ 0.6
HDAC5-201ENST00000225983 UBE2HP62256 183 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 SLC39A6Q13433 755 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 PHACTR3Q96KR7 559 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 SNRPA1P09661 255 aaKnown RBP18.78■□□□□ 0.6
HDAC5-201ENST00000225983 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
HDAC5-201ENST00000225983 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 IQCA1Q86XH1 822 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 A2MP01023 1474 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 VAMP4O75379 141 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 SEC24BO95487 1268 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
HDAC5-201ENST00000225983 CTTNBP2Q8WZ74 1663 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 TNRQ92752 1358 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 ZSCAN22P10073 491 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-201ENST00000225983 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-201ENST00000225983 ISM2Q6H9L7 571 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 BRF1Q92994 677 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 GOLGA6L10A6NI86 522 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 EIF3JO75822 258 aaKnown RBP18.77■□□□□ 0.6
HDAC5-201ENST00000225983 CNPY2Q9Y2B0 182 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 ATP8B2P98198 1209 aa18.77■□□□□ 0.6
HDAC5-201ENST00000225983 ORC3Q9UBD5 711 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-201ENST00000225983 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.59
HDAC5-201ENST00000225983 XAGE3Q8WTP9 111 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 CPLX3Q8WVH0 158 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 CCDC102AQ96A19 550 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 TMX1Q9H3N1 280 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 URI1O94763 535 aaPredicted RBP18.76■□□□□ 0.59
HDAC5-201ENST00000225983 ERLIN2O94905 339 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 HMG20BQ9P0W2 317 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 TNNT1P13805 278 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 TMEM67Q5HYA8 995 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 KIF18AQ8NI77 898 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 ZSCAN12O43309 604 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 RDXP35241 583 aaKnown RBP18.76■□□□□ 0.59
HDAC5-201ENST00000225983 ZNF165P49910 485 aa18.76■□□□□ 0.59
HDAC5-201ENST00000225983 RNF41Q9H4P4 317 aaPredicted RBP18.76■□□□□ 0.59
HDAC5-201ENST00000225983 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
HDAC5-201ENST00000225983 PA2G4Q9UQ80 394 aaKnown RBP18.75■□□□□ 0.59
HDAC5-201ENST00000225983 STX1AQ16623 288 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 COPS6Q7L5N1 327 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
HDAC5-201ENST00000225983 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 ASXL2Q76L83 1435 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 ERICH4A6NGS2 130 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 NLRP5P59047 1200 aa18.75■□□□□ 0.59
HDAC5-201ENST00000225983 PIK3C2GO75747 1445 aa18.74■□□□□ 0.59
HDAC5-201ENST00000225983 KIF2AO00139 706 aaPredicted RBP18.74■□□□□ 0.59
HDAC5-201ENST00000225983 CEP85Q6P2H3 762 aa18.74■□□□□ 0.59
HDAC5-201ENST00000225983 TMC6Q7Z403 805 aa18.74■□□□□ 0.59
HDAC5-201ENST00000225983 ZBTB40Q9NUA8 1239 aa18.74■□□□□ 0.59
HDAC5-201ENST00000225983 LRSAM1Q6UWE0 723 aa18.74■□□□□ 0.59
HDAC5-201ENST00000225983 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
HDAC5-201ENST00000225983 SLC4A8Q2Y0W8 1093 aa18.74■□□□□ 0.59
HDAC5-201ENST00000225983 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.59
HDAC5-201ENST00000225983 METAP2P50579 478 aaKnown RBP eCLIP18.73■□□□□ 0.596e-7■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms