RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 USP27XA6NNY8 438 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 HSPA4P34932 840 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 FGD1P98174 961 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 SIL1Q9H173 461 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 GTPBP4Q9BZE4 634 aaKnown RBP17.05■□□□□ 0.32
SFXN3-201ENST00000224807 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 SPATA32Q96LK8 384 aa17.05■□□□□ 0.32
SFXN3-201ENST00000224807 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
SFXN3-201ENST00000224807 GNAI3P08754 354 aa17.04■□□□□ 0.32
SFXN3-201ENST00000224807 ZNF165P49910 485 aa17.04■□□□□ 0.32
SFXN3-201ENST00000224807 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
SFXN3-201ENST00000224807 ME3Q16798 604 aa17.04■□□□□ 0.32
SFXN3-201ENST00000224807 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
SFXN3-201ENST00000224807 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
SFXN3-201ENST00000224807 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
SFXN3-201ENST00000224807 PTPRCP08575 1304 aa17.04■□□□□ 0.32
SFXN3-201ENST00000224807 EDC4Q6P2E9 1401 aaKnown RBP17.04■□□□□ 0.32
SFXN3-201ENST00000224807 AMPHP49418 695 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 KRT85P78386 507 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 UTP14CQ5TAP6 766 aaKnown RBP17.03■□□□□ 0.32
SFXN3-201ENST00000224807 FAM200AQ8TCP9 573 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 RHPN1Q8TCX5 695 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 CACTINQ8WUQ7 758 aaKnown RBP17.03■□□□□ 0.32
SFXN3-201ENST00000224807 AATKQ6ZMQ8 1374 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 GOLGA6L19H0YKK7 550 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 CNTROBQ8N137 903 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 TMX1Q9H3N1 280 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 SPTLC3Q9NUV7 552 aa17.03■□□□□ 0.32
SFXN3-201ENST00000224807 LETM1O95202 739 aaPredicted RBP17.02■□□□□ 0.32
SFXN3-201ENST00000224807 CCDC144BQ3MJ40 725 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 MRVI1Q9Y6F6 885 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 BECN2A8MW95 431 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 SGSM2O43147 1006 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 ANAPC15P60006 121 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 ELF2Q15723 593 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 GTF3C6Q969F1 213 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 FTOQ9C0B1 505 aaKnown RBP eCLIP17.02■□□□□ 0.32
SFXN3-201ENST00000224807 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.32
SFXN3-201ENST00000224807 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
SFXN3-201ENST00000224807 ZNF215Q9UL58 517 aaPredicted RBP17.02■□□□□ 0.32
SFXN3-201ENST00000224807 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.31
SFXN3-201ENST00000224807 NR1I2O75469 434 aa17.02■□□□□ 0.31
SFXN3-201ENST00000224807 PTPN21Q16825 1174 aa17.02■□□□□ 0.31
SFXN3-201ENST00000224807 HDGFL1Q5TGJ6 251 aa17.02■□□□□ 0.31
SFXN3-201ENST00000224807 FAM177A1Q8N128 213 aaPredicted RBP17.02■□□□□ 0.31
SFXN3-201ENST00000224807 FAM227BQ96M60 508 aa17.01■□□□□ 0.31
SFXN3-201ENST00000224807 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
SFXN3-201ENST00000224807 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
SFXN3-201ENST00000224807 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
SFXN3-201ENST00000224807 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
SFXN3-201ENST00000224807 TAF7Q15545 349 aaPredicted RBP17■□□□□ 0.31
SFXN3-201ENST00000224807 CEP135Q66GS9 1140 aa17■□□□□ 0.31
SFXN3-201ENST00000224807 ISM2Q6H9L7 571 aa17■□□□□ 0.31
SFXN3-201ENST00000224807 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
SFXN3-201ENST00000224807 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
SFXN3-201ENST00000224807 CPS1P31327 1500 aa17■□□□□ 0.31
SFXN3-201ENST00000224807 WASLO00401 505 aaPredicted RBP17■□□□□ 0.31
SFXN3-201ENST00000224807 JAK2O60674 1132 aa17■□□□□ 0.31
SFXN3-201ENST00000224807 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
SFXN3-201ENST00000224807 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
SFXN3-201ENST00000224807 BOLA2Q9H3K6 86 aa17■□□□□ 0.31
SFXN3-201ENST00000224807 RAD50Q92878 1312 aa16.99■□□□□ 0.31
SFXN3-201ENST00000224807 H3BQV1 296 aa16.99■□□□□ 0.31
SFXN3-201ENST00000224807 KIF20AO95235 890 aa16.99■□□□□ 0.31
SFXN3-201ENST00000224807 GTF2F1P35269 517 aaKnown RBP eCLIP16.99■□□□□ 0.31
SFXN3-201ENST00000224807 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
SFXN3-201ENST00000224807 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
SFXN3-201ENST00000224807 POLR3GO15318 223 aaPredicted RBP16.99■□□□□ 0.31
SFXN3-201ENST00000224807 IFIT2P09913 472 aaKnown RBP16.98■□□□□ 0.31
SFXN3-201ENST00000224807 AIMP1Q12904 312 aaKnown RBP16.98■□□□□ 0.31
SFXN3-201ENST00000224807 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
SFXN3-201ENST00000224807 DLC1Q96QB1 1528 aa16.98■□□□□ 0.31
SFXN3-201ENST00000224807 MAP3K19Q56UN5 1328 aa16.98■□□□□ 0.31
SFXN3-201ENST00000224807 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
SFXN3-201ENST00000224807 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
SFXN3-201ENST00000224807 KIAA0232Q92628 1395 aa16.98■□□□□ 0.31
SFXN3-201ENST00000224807 CHGBP05060 677 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 SKILP12757 684 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 FUCA2Q9BTY2 467 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 SALL3Q9BXA9 1300 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 PTPN14Q15678 1187 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 AACSQ86V21 672 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 KLHDC4Q8TBB5 520 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 OGFRQ9NZT2 677 aa16.97■□□□□ 0.31
SFXN3-201ENST00000224807 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
SFXN3-201ENST00000224807 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 BIN1O00499 593 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 ZNF75DP51815 510 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 CTNNA3Q9UI47 895 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
SFXN3-201ENST00000224807 ANKRD7Q92527 254 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 TTC14Q96N46 770 aa16.96■□□□□ 0.31
SFXN3-201ENST00000224807 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms