RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
CRX-201ENST00000221996 HOXB7P09629 217 aa11.63□□□□□ -0.55
CRX-201ENST00000221996 DDX21Q9NR30 783 aaKnown RBP eCLIP11.63□□□□□ -0.55
CRX-201ENST00000221996 TMOD3Q9NYL9 352 aa11.63□□□□□ -0.55
CRX-201ENST00000221996 DDX11Q96FC9 970 aa11.63□□□□□ -0.55
CRX-201ENST00000221996 CCDC39Q9UFE4 941 aa11.63□□□□□ -0.55
CRX-201ENST00000221996 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 TRIM29Q14134 588 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 KDM4AO75164 1064 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 SH2B1Q9NRF2 756 aaPredicted RBP11.62□□□□□ -0.55
CRX-201ENST00000221996 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 VPS37DQ86XT2 251 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
CRX-201ENST00000221996 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.62□□□□□ -0.55
CRX-201ENST00000221996 TCEANC2Q96MN5 208 aa11.62□□□□□ -0.55
CRX-201ENST00000221996 STARD3NLO95772 234 aa11.61□□□□□ -0.55
CRX-201ENST00000221996 IFIT1P09914 478 aaKnown RBP11.61□□□□□ -0.55
CRX-201ENST00000221996 STX6O43752 255 aa11.61□□□□□ -0.55
CRX-201ENST00000221996 ZNF790Q6PG37 636 aa11.61□□□□□ -0.55
CRX-201ENST00000221996 DDX17Q92841 729 aaKnown RBP11.61□□□□□ -0.55
CRX-201ENST00000221996 BICC1Q9H694 974 aaKnown RBP11.61□□□□□ -0.55
CRX-201ENST00000221996 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
CRX-201ENST00000221996 ZC3H13Q5T200 1668 aaKnown RBP11.61□□□□□ -0.55
CRX-201ENST00000221996 GJB2P29033 226 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 AKAP17AQ02040 695 aaKnown RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 LMBR1LQ6UX01 489 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 CWC25Q9NXE8 425 aaPredicted RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 RBM8AQ9Y5S9 174 aaKnown RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 GOLIM4O00461 696 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 ANTXR1Q9H6X2 564 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 HSPA2P54652 639 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 ZSCAN23Q3MJ62 389 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 NECAB1Q8N987 351 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 SPATA32Q96LK8 384 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
CRX-201ENST00000221996 R3HCC1Q9Y3T6 440 aaKnown RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 ANO8Q9HCE9 1232 aaPredicted RBP11.6□□□□□ -0.55
CRX-201ENST00000221996 PPLO60437 1756 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 METTL24Q5JXM2 366 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
CRX-201ENST00000221996 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
CRX-201ENST00000221996 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 SSH3Q8TE77 659 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 CLTCQ00610 1675 aaKnown RBP11.59□□□□□ -0.55
CRX-201ENST00000221996 CPA1P15085 419 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 GPTP24298 496 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 DCAF5Q96JK2 942 aa11.59□□□□□ -0.55
CRX-201ENST00000221996 CCDC192P0DO97 292 aa11.58□□□□□ -0.55
CRX-201ENST00000221996 NMIQ13287 307 aaPredicted RBP11.58□□□□□ -0.55
CRX-201ENST00000221996 TNMDQ9H2S6 317 aa11.58□□□□□ -0.55
CRX-201ENST00000221996 SNRKQ9NRH2 765 aa11.58□□□□□ -0.55
CRX-201ENST00000221996 AK2P54819 239 aa11.58□□□□□ -0.56
CRX-201ENST00000221996 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 GIGYF1O75420 1035 aaPredicted RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 IDH1O75874 414 aaKnown RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 ERICH2A1L162 156 aa11.58□□□□□ -0.56
CRX-201ENST00000221996 DHX16O60231 1041 aaKnown RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 RRP12Q5JTH9 1297 aaKnown RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 MPHOSPH8Q99549 860 aa11.58□□□□□ -0.56
CRX-201ENST00000221996 U3KPZ7 1027 aaPredicted RBP11.58□□□□□ -0.56
CRX-201ENST00000221996 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 TRIM5Q9C035 493 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 ZSCAN30Q86W11 494 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 SPC24Q8NBT2 197 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 ZNF496Q96IT1 587 aaPredicted RBP11.57□□□□□ -0.56
CRX-201ENST00000221996 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
CRX-201ENST00000221996 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
CRX-201ENST00000221996 SGSM2O43147 1006 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 ZSCAN22P10073 491 aaPredicted RBP11.57□□□□□ -0.56
CRX-201ENST00000221996 CCDC183Q5T5S1 534 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 BEND3Q5T5X7 828 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
CRX-201ENST00000221996 NUP62CLQ9H1M0 184 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 CPS1P31327 1500 aa11.57□□□□□ -0.56
CRX-201ENST00000221996 ME1P48163 572 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 STK11IPQ8N1F8 1099 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 ZNF396Q96N95 335 aaPredicted RBP11.56□□□□□ -0.56
CRX-201ENST00000221996 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
CRX-201ENST00000221996 STK38Q15208 465 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 CAMK4Q16566 473 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 SLC52A2Q9HAB3 445 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 PREX1Q8TCU6 1659 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 IBTKQ9P2D0 1353 aaPredicted RBP11.56□□□□□ -0.56
CRX-201ENST00000221996 DLC1Q96QB1 1528 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 ARHGEF25Q86VW2 580 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 INTS4Q96HW7 963 aaKnown RBP11.56□□□□□ -0.56
CRX-201ENST00000221996 NEK1Q96PY6 1258 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 AOX1Q06278 1338 aa11.56□□□□□ -0.56
CRX-201ENST00000221996 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms