RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
NEFM-201ENST00000221166 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
NEFM-201ENST00000221166 LETM1O95202 739 aaPredicted RBP13.36□□□□□ -0.27
NEFM-201ENST00000221166 LARGE1O95461 756 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 PKNOX2Q96KN3 472 aa13.36□□□□□ -0.27
NEFM-201ENST00000221166 TSPOAP1O95153 1857 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 ADCK5Q3MIX3 580 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 CHMP4AQ9BY43 222 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 MYL6BP14649 208 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 CHAF1AQ13111 956 aaPredicted RBP13.35□□□□□ -0.27
NEFM-201ENST00000221166 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
NEFM-201ENST00000221166 KNDC1Q76NI1 1749 aa13.35□□□□□ -0.27
NEFM-201ENST00000221166 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
NEFM-201ENST00000221166 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
NEFM-201ENST00000221166 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
NEFM-201ENST00000221166 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
NEFM-201ENST00000221166 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
NEFM-201ENST00000221166 BICD2Q8TD16 824 aa13.34□□□□□ -0.27
NEFM-201ENST00000221166 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
NEFM-201ENST00000221166 RBM8AQ9Y5S9 174 aaKnown RBP13.34□□□□□ -0.27
NEFM-201ENST00000221166 FAM227BQ96M60 508 aa13.34□□□□□ -0.27
NEFM-201ENST00000221166 KCNA6P17658 529 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.28
NEFM-201ENST00000221166 NOLC1Q14978 699 aaKnown RBP eCLIP13.33□□□□□ -0.28
NEFM-201ENST00000221166 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 REREQ9P2R6 1566 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 OVOS2A0A0J9YW53 1432 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 OVOS2Q6IE36 1432 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 H3BQV1 296 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 CCDC192P0DO97 292 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 KRT85P78386 507 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.28
NEFM-201ENST00000221166 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
NEFM-201ENST00000221166 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
NEFM-201ENST00000221166 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 GOLGA6L6A8MZA4 724 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 AOX1Q06278 1338 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 PSMA5P28066 241 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
NEFM-201ENST00000221166 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 MAP7D2Q96T17 732 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 DNAJC2Q99543 621 aaKnown RBP13.32□□□□□ -0.28
NEFM-201ENST00000221166 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
NEFM-201ENST00000221166 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
NEFM-201ENST00000221166 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
NEFM-201ENST00000221166 PROSER3Q2NL68 480 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 EVI5LQ96CN4 794 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 NEXNQ0ZGT2 675 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 ME3Q16798 604 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 NUP62CLQ9H1M0 184 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
NEFM-201ENST00000221166 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
NEFM-201ENST00000221166 DYNC1I1O14576 645 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 KDM4AO75164 1064 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 TNMDQ9H2S6 317 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
NEFM-201ENST00000221166 POLA2Q14181 598 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 SPATA32Q96LK8 384 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 TRIM5Q9C035 493 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 RICTORQ6R327 1708 aa13.3□□□□□ -0.28
NEFM-201ENST00000221166 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 MTMR6Q9Y217 621 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 NDUFB9Q9Y6M9 179 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 MAP3K11Q16584 847 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 EDC3Q96F86 508 aaKnown RBP13.29□□□□□ -0.28
NEFM-201ENST00000221166 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 TTC14Q96N46 770 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
NEFM-201ENST00000221166 CCDC171Q6TFL3 1326 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 PDCP20941 246 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 KSR2Q6VAB6 950 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 BICC1Q9H694 974 aaKnown RBP13.28□□□□□ -0.28
NEFM-201ENST00000221166 TBX22Q9Y458 520 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 RPAP1Q9BWH6 1393 aaPredicted RBP13.28□□□□□ -0.28
NEFM-201ENST00000221166 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
NEFM-201ENST00000221166 TERF1P54274 439 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 CDC37L1Q7L3B6 337 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 SUCLG2Q96I99 432 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 NEUROD6Q96NK8 337 aa13.28□□□□□ -0.28
NEFM-201ENST00000221166 DACT1Q9NYF0 836 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms