RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 RGL2O15211 777 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 BCAR3O75815 825 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 G2E3Q7L622 706 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
TIMP1-201ENST00000218388 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 NARFQ9UHQ1 456 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
TIMP1-201ENST00000218388 USP42Q9H9J4 1324 aaKnown RBP16.77■□□□□ 0.28
TIMP1-201ENST00000218388 TTLL7Q6ZT98 887 aa16.77■□□□□ 0.28
TIMP1-201ENST00000218388 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
TIMP1-201ENST00000218388 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
TIMP1-201ENST00000218388 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
TIMP1-201ENST00000218388 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
TIMP1-201ENST00000218388 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
TIMP1-201ENST00000218388 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
TIMP1-201ENST00000218388 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
TIMP1-201ENST00000218388 API5Q9BZZ5 524 aaKnown RBP16.76■□□□□ 0.27
TIMP1-201ENST00000218388 ZBTB3Q9H5J0 574 aa16.76■□□□□ 0.27
TIMP1-201ENST00000218388 NOB1Q9ULX3 412 aaKnown RBP16.76■□□□□ 0.27
TIMP1-201ENST00000218388 ARFGEF2Q9Y6D5 1785 aa16.76■□□□□ 0.27
TIMP1-201ENST00000218388 CAMTA2O94983 1202 aa16.75■□□□□ 0.27
TIMP1-201ENST00000218388 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
TIMP1-201ENST00000218388 USPL1Q5W0Q7 1092 aa16.75■□□□□ 0.27
TIMP1-201ENST00000218388 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
TIMP1-201ENST00000218388 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
TIMP1-201ENST00000218388 SMIM5Q71RC9 77 aa16.75■□□□□ 0.27
TIMP1-201ENST00000218388 NUP98P52948 1817 aa16.75■□□□□ 0.27
TIMP1-201ENST00000218388 PI4KAP2A4QPH2 592 aa16.74■□□□□ 0.27
TIMP1-201ENST00000218388 NEXNQ0ZGT2 675 aa16.74■□□□□ 0.27
TIMP1-201ENST00000218388 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
TIMP1-201ENST00000218388 PI4KAP1Q8N8J0 262 aa16.74■□□□□ 0.27
TIMP1-201ENST00000218388 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
TIMP1-201ENST00000218388 SRP68Q9UHB9 627 aaKnown RBP16.74■□□□□ 0.27
TIMP1-201ENST00000218388 ANKRD36CQ5JPF3 1778 aa16.74■□□□□ 0.27
TIMP1-201ENST00000218388 MS4A1P11836 297 aa16.73■□□□□ 0.27
TIMP1-201ENST00000218388 ATF7IPQ6VMQ6 1270 aa16.73■□□□□ 0.27
TIMP1-201ENST00000218388 DNAAF4Q8WXU2 420 aa16.73■□□□□ 0.27
TIMP1-201ENST00000218388 MAP3K2Q9Y2U5 619 aa16.73■□□□□ 0.27
TIMP1-201ENST00000218388 ADCY9O60503 1353 aa16.73■□□□□ 0.27
TIMP1-201ENST00000218388 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
TIMP1-201ENST00000218388 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
TIMP1-201ENST00000218388 PXDNLA1KZ92 1463 aa16.72■□□□□ 0.27
TIMP1-201ENST00000218388 ATP10DQ9P241 1426 aa16.71■□□□□ 0.27
TIMP1-201ENST00000218388 GYS1P13807 737 aa16.71■□□□□ 0.27
TIMP1-201ENST00000218388 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
TIMP1-201ENST00000218388 METTL22Q9BUU2 404 aaPredicted RBP16.71■□□□□ 0.27
TIMP1-201ENST00000218388 PSDA5PKW4 1024 aaPredicted RBP16.7■□□□□ 0.26
TIMP1-201ENST00000218388 TRIM27P14373 513 aa16.7■□□□□ 0.26
TIMP1-201ENST00000218388 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
TIMP1-201ENST00000218388 HLFQ16534 295 aa16.7■□□□□ 0.26
TIMP1-201ENST00000218388 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
TIMP1-201ENST00000218388 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
TIMP1-201ENST00000218388 AFDNP55196 1824 aaKnown RBP16.69■□□□□ 0.26
TIMP1-201ENST00000218388 F6X3S4 739 aa16.69■□□□□ 0.26
TIMP1-201ENST00000218388 RRP1P56182 461 aaKnown RBP16.69■□□□□ 0.26
TIMP1-201ENST00000218388 FKBP8Q14318 412 aa16.69■□□□□ 0.26
TIMP1-201ENST00000218388 SETDB2Q96T68 719 aa16.69■□□□□ 0.26
TIMP1-201ENST00000218388 MYD88Q99836 296 aa16.69■□□□□ 0.26
TIMP1-201ENST00000218388 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
TIMP1-201ENST00000218388 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
TIMP1-201ENST00000218388 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
TIMP1-201ENST00000218388 PARP10Q53GL7 1025 aa16.68■□□□□ 0.26
TIMP1-201ENST00000218388 DZIP1LQ8IYY4 767 aaKnown RBP16.68■□□□□ 0.26
TIMP1-201ENST00000218388 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
TIMP1-201ENST00000218388 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
TIMP1-201ENST00000218388 ABCC4O15439 1325 aa16.68■□□□□ 0.26
TIMP1-201ENST00000218388 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
TIMP1-201ENST00000218388 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
TIMP1-201ENST00000218388 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
TIMP1-201ENST00000218388 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
TIMP1-201ENST00000218388 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
TIMP1-201ENST00000218388 PLIN1O60240 522 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 GPTP24298 496 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
TIMP1-201ENST00000218388 COL24A1Q17RW2 1714 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 PPP1R42Q7Z4L9 355 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 CCDC191Q8NCU4 936 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 ISCA1Q9BUE6 129 aa16.66■□□□□ 0.26
TIMP1-201ENST00000218388 PDGFDQ9GZP0 370 aaPredicted RBP16.66■□□□□ 0.26
TIMP1-201ENST00000218388 ATP5J2-PTCD1G3V325 749 aa16.65■□□□□ 0.26
TIMP1-201ENST00000218388 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
TIMP1-201ENST00000218388 NFIXQ14938 502 aa16.65■□□□□ 0.26
TIMP1-201ENST00000218388 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
TIMP1-201ENST00000218388 NYXQ9GZU5 481 aa16.65■□□□□ 0.26
TIMP1-201ENST00000218388 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
TIMP1-201ENST00000218388 SUPT16HQ9Y5B9 1047 aaKnown RBP16.65■□□□□ 0.26
TIMP1-201ENST00000218388 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
TIMP1-201ENST00000218388 IBTKQ9P2D0 1353 aaPredicted RBP16.64■□□□□ 0.26
TIMP1-201ENST00000218388 NEURL1BA8MQ27 555 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 NPHP1O15259 732 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 ZBTB7AO95365 584 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 MMP10P09238 476 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 POLD1P28340 1107 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 TM4SF1P30408 202 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
TIMP1-201ENST00000218388 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms