RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PI4KAP2A4QPH2 592 aa34.71■■■■□ 3.15
CHMP4B-201ENST00000217402 SOCS7O14512 581 aa34.71■■■■□ 3.15
CHMP4B-201ENST00000217402 PLIN1O60240 522 aa34.71■■■■□ 3.15
CHMP4B-201ENST00000217402 COL23A1Q86Y22 540 aaPredicted RBP34.71■■■■□ 3.15
CHMP4B-201ENST00000217402 PI4KAP1Q8N8J0 262 aa34.71■■■■□ 3.15
CHMP4B-201ENST00000217402 MAP3K15Q6ZN16 1313 aa34.71■■■■□ 3.15
CHMP4B-201ENST00000217402 ADCY9O60503 1353 aa34.7■■■■□ 3.15
CHMP4B-201ENST00000217402 RIC3Q7Z5B4 369 aa34.7■■■■□ 3.15
CHMP4B-201ENST00000217402 FLAD1Q8NFF5 587 aa34.7■■■■□ 3.15
CHMP4B-201ENST00000217402 PLBD2Q8NHP8 589 aa34.7■■■■□ 3.15
CHMP4B-201ENST00000217402 F6X3S4 739 aa34.7■■■■□ 3.14
CHMP4B-201ENST00000217402 IPO8O15397 1037 aaKnown RBP34.7■■■■□ 3.14
CHMP4B-201ENST00000217402 ZKSCAN2Q63HK3 967 aa34.7■■■■□ 3.14
CHMP4B-201ENST00000217402 ZPR1O75312 459 aa34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 CAMTA2O94983 1202 aa34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 KSR2Q6VAB6 950 aa34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 NARFQ9UHQ1 456 aa34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 MAP3K2Q9Y2U5 619 aa34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 SUPT16HQ9Y5B9 1047 aaKnown RBP34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 USP42Q9H9J4 1324 aaKnown RBP34.69■■■■□ 3.14
CHMP4B-201ENST00000217402 USPL1Q5W0Q7 1092 aa34.68■■■■□ 3.14
CHMP4B-201ENST00000217402 TNNQ9UQP3 1299 aa34.68■■■■□ 3.14
CHMP4B-201ENST00000217402 QSER1Q2KHR3 1735 aa34.67■■■■□ 3.14
CHMP4B-201ENST00000217402 TRIM27P14373 513 aa34.67■■■■□ 3.14
CHMP4B-201ENST00000217402 ATF7IPQ6VMQ6 1270 aa34.67■■■■□ 3.14
CHMP4B-201ENST00000217402 SCN7AQ01118 1682 aa34.67■■■■□ 3.14
CHMP4B-201ENST00000217402 RRP1P56182 461 aaKnown RBP34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 HLFQ16534 295 aa34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 ARHGAP45Q92619 1136 aa34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 API5Q9BZZ5 524 aaKnown RBP34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 R3HDM1Q15032 1099 aaKnown RBP34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 BCORQ6W2J9 1755 aa34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 ARFGEF2Q9Y6D5 1785 aa34.66■■■■□ 3.14
CHMP4B-201ENST00000217402 CLUAP1Q96AJ1 413 aa34.65■■■■□ 3.14
CHMP4B-201ENST00000217402 ERVV-1B6SEH8 477 aa34.64■■■■□ 3.14
CHMP4B-201ENST00000217402 DNAAF4Q8WXU2 420 aa34.64■■■■□ 3.14
CHMP4B-201ENST00000217402 SLC4A10Q6U841 1118 aa34.63■■■■□ 3.13
CHMP4B-201ENST00000217402 PDGFDQ9GZP0 370 aaPredicted RBP34.63■■■■□ 3.13
CHMP4B-201ENST00000217402 GIGYF2Q6Y7W6 1299 aaKnown RBP34.62■■■■□ 3.13
CHMP4B-201ENST00000217402 BCL2L12Q9HB09 334 aa34.62■■■■□ 3.13
CHMP4B-201ENST00000217402 ZNF652Q9Y2D9 606 aa34.61■■■■□ 3.13
CHMP4B-201ENST00000217402 PSDA5PKW4 1024 aaPredicted RBP34.6■■■■□ 3.13
CHMP4B-201ENST00000217402 MYD88Q99836 296 aa34.6■■■■□ 3.13
CHMP4B-201ENST00000217402 GYS1P13807 737 aa34.59■■■■□ 3.13
CHMP4B-201ENST00000217402 FTSJ3Q8IY81 847 aaKnown RBP34.59■■■■□ 3.13
CHMP4B-201ENST00000217402 METTL22Q9BUU2 404 aaPredicted RBP34.59■■■■□ 3.13
CHMP4B-201ENST00000217402 ABCC4O15439 1325 aa34.58■■■■□ 3.13
CHMP4B-201ENST00000217402 FKBP8Q14318 412 aa34.57■■■■□ 3.12
CHMP4B-201ENST00000217402 DZIP1LQ8IYY4 767 aaKnown RBP34.57■■■■□ 3.12
CHMP4B-201ENST00000217402 NUP98P52948 1817 aa34.57■■■■□ 3.12
CHMP4B-201ENST00000217402 RNF123Q5XPI4 1314 aa34.56■■■■□ 3.12
CHMP4B-201ENST00000217402 ATP5J2-PTCD1G3V325 749 aa34.56■■■■□ 3.12
CHMP4B-201ENST00000217402 NEXNQ0ZGT2 675 aa34.56■■■■□ 3.12
CHMP4B-201ENST00000217402 CLEC4GQ6UXB4 293 aa34.56■■■■□ 3.12
CHMP4B-201ENST00000217402 PANK1Q8TE04 598 aa34.56■■■■□ 3.12
CHMP4B-201ENST00000217402 RLBP1P12271 317 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 GPTP24298 496 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 TCIRG1Q13488 830 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 C20orf194Q5TEA3 1177 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 PXDNLA1KZ92 1463 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 HSP90AB3PQ58FF7 597 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 MSL1Q68DK7 614 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 BICDL1Q6ZP65 573 aa34.55■■■■□ 3.12
CHMP4B-201ENST00000217402 TBC1D9BQ66K14 1250 aa34.54■■■■□ 3.12
CHMP4B-201ENST00000217402 ATP10DQ9P241 1426 aa34.53■■■■□ 3.12
CHMP4B-201ENST00000217402 RGL2O15211 777 aa34.53■■■■□ 3.12
CHMP4B-201ENST00000217402 CWF19L2Q2TBE0 894 aaKnown RBP34.53■■■■□ 3.12
CHMP4B-201ENST00000217402 BEND3Q5T5X7 828 aa34.53■■■■□ 3.12
CHMP4B-201ENST00000217402 NIP7Q9Y221 180 aaKnown RBP eCLIP34.52■■■■□ 3.12
CHMP4B-201ENST00000217402 ANKRD36CQ5JPF3 1778 aa34.52■■■■□ 3.12
CHMP4B-201ENST00000217402 IGKV5-2P06315 115 aa34.52■■■■□ 3.12
CHMP4B-201ENST00000217402 TMEM57Q8N5G2 664 aa34.52■■■■□ 3.12
CHMP4B-201ENST00000217402 CASZ1Q86V15 1759 aa34.51■■■■□ 3.11
CHMP4B-201ENST00000217402 MS4A1P11836 297 aa34.51■■■■□ 3.11
CHMP4B-201ENST00000217402 LINS1Q8NG48 757 aa34.51■■■■□ 3.11
CHMP4B-201ENST00000217402 SRCIN1Q9C0H9 1055 aa34.51■■■■□ 3.11
CHMP4B-201ENST00000217402 ZNF34Q8IZ26 560 aa34.5■■■■□ 3.11
CHMP4B-201ENST00000217402 ISCA1Q9BUE6 129 aa34.5■■■■□ 3.11
CHMP4B-201ENST00000217402 UBN2Q6ZU65 1347 aa34.5■■■■□ 3.11
CHMP4B-201ENST00000217402 CCT4P50991 539 aaKnown RBP34.49■■■■□ 3.11
CHMP4B-201ENST00000217402 PDE3AQ14432 1141 aa34.48■■■■□ 3.11
CHMP4B-201ENST00000217402 NFIXQ14938 502 aa34.48■■■■□ 3.11
CHMP4B-201ENST00000217402 NLGN1Q8N2Q7 840 aa34.48■■■■□ 3.11
CHMP4B-201ENST00000217402 NEURL1BA8MQ27 555 aa34.48■■■■□ 3.11
CHMP4B-201ENST00000217402 INTS3Q68E01 1043 aaKnown RBP34.47■■■■□ 3.11
CHMP4B-201ENST00000217402 ITPRIPQ8IWB1 547 aa34.47■■■■□ 3.11
CHMP4B-201ENST00000217402 SLC16A10Q8TF71 515 aa34.47■■■■□ 3.11
CHMP4B-201ENST00000217402 SETDB2Q96T68 719 aa34.47■■■■□ 3.11
CHMP4B-201ENST00000217402 FAM177BA6PVY3 158 aa34.46■■■■□ 3.11
CHMP4B-201ENST00000217402 ZBTB7AO95365 584 aa34.46■■■■□ 3.11
CHMP4B-201ENST00000217402 NLRP10Q86W26 655 aa34.46■■■■□ 3.11
CHMP4B-201ENST00000217402 N4BP2Q86UW6 1770 aaPredicted RBP34.46■■■■□ 3.11
CHMP4B-201ENST00000217402 AFDNP55196 1824 aaKnown RBP34.46■■■■□ 3.11
CHMP4B-201ENST00000217402 COG6Q9Y2V7 657 aa34.45■■■■□ 3.11
CHMP4B-201ENST00000217402 CWC25Q9NXE8 425 aaPredicted RBP34.44■■■■□ 3.1
CHMP4B-201ENST00000217402 ALDH1L1O75891 902 aa34.44■■■■□ 3.1
CHMP4B-201ENST00000217402 CCDC191Q8NCU4 936 aa34.44■■■■□ 3.1
CHMP4B-201ENST00000217402 IRX6P78412 446 aaPredicted RBP34.43■■■■□ 3.1
CHMP4B-201ENST00000217402 TRIM28Q13263 835 aaKnown RBP34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms