RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 CWC27Q6UX04 472 aaKnown RBP29.2■■■□□ 2.27
SNTA1-201ENST00000217381 RASEFQ8IZ41 740 aa29.2■■■□□ 2.27
SNTA1-201ENST00000217381 KIF1AQ12756 1690 aa29.2■■■□□ 2.26
SNTA1-201ENST00000217381 WDR33Q9C0J8 1336 aaKnown RBP29.2■■■□□ 2.26
SNTA1-201ENST00000217381 RPAP1Q9BWH6 1393 aaPredicted RBP29.19■■■□□ 2.26
SNTA1-201ENST00000217381 LMOD2Q6P5Q4 547 aa29.19■■■□□ 2.26
SNTA1-201ENST00000217381 ALS2Q96Q42 1657 aa29.19■■■□□ 2.26
SNTA1-201ENST00000217381 KSR2Q6VAB6 950 aa29.19■■■□□ 2.26
SNTA1-201ENST00000217381 MST1RQ04912 1400 aa29.18■■■□□ 2.26
SNTA1-201ENST00000217381 CLASRPQ8N2M8 674 aaKnown RBP29.18■■■□□ 2.26
SNTA1-201ENST00000217381 C9orf78Q9NZ63 289 aaPredicted RBP29.18■■■□□ 2.26
SNTA1-201ENST00000217381 C1orf167Q5SNV9 1468 aa29.18■■■□□ 2.26
SNTA1-201ENST00000217381 HS1BP3Q53T59 392 aa29.17■■■□□ 2.26
SNTA1-201ENST00000217381 KIAA1211Q6ZU35 1233 aa29.17■■■□□ 2.26
SNTA1-201ENST00000217381 KRT28Q7Z3Y7 464 aa29.17■■■□□ 2.26
SNTA1-201ENST00000217381 SPG7Q9UQ90 795 aa29.17■■■□□ 2.26
SNTA1-201ENST00000217381 AK2P54819 239 aa29.16■■■□□ 2.26
SNTA1-201ENST00000217381 HSPA2P54652 639 aa29.16■■■□□ 2.26
SNTA1-201ENST00000217381 CWF19L2Q2TBE0 894 aaKnown RBP29.15■■■□□ 2.26
SNTA1-201ENST00000217381 DIAPH3Q9NSV4 1193 aa29.15■■■□□ 2.26
SNTA1-201ENST00000217381 ECHDC1Q9NTX5 307 aa29.15■■■□□ 2.26
SNTA1-201ENST00000217381 PA2G4Q9UQ80 394 aaKnown RBP29.15■■■□□ 2.26
SNTA1-201ENST00000217381 ERBB3P21860 1342 aa29.14■■■□□ 2.26
SNTA1-201ENST00000217381 RUFY3Q7L099 469 aa29.14■■■□□ 2.26
SNTA1-201ENST00000217381 C5P01031 1676 aa29.14■■■□□ 2.25
SNTA1-201ENST00000217381 ERC1Q8IUD2 1116 aa29.14■■■□□ 2.25
SNTA1-201ENST00000217381 LIMCH1Q9UPQ0 1083 aa29.14■■■□□ 2.25
SNTA1-201ENST00000217381 FOXD4L6Q3SYB3 417 aaPredicted RBP29.12■■■□□ 2.25
SNTA1-201ENST00000217381 FOXD4L3Q6VB84 417 aaPredicted RBP29.12■■■□□ 2.25
SNTA1-201ENST00000217381 RUFY2Q8WXA3 655 aa29.12■■■□□ 2.25
SNTA1-201ENST00000217381 GDPD2Q9HCC8 539 aa29.12■■■□□ 2.25
SNTA1-201ENST00000217381 HDAC5Q9UQL6 1122 aa29.12■■■□□ 2.25
SNTA1-201ENST00000217381 GADD45BO75293 160 aaPredicted RBP29.12■■■□□ 2.25
SNTA1-201ENST00000217381 HYPKQ9NX55 129 aa29.12■■■□□ 2.25
SNTA1-201ENST00000217381 SCN11AQ9UI33 1791 aa29.12■■■□□ 2.25
SNTA1-201ENST00000217381 USP48Q86UV5 1035 aa29.11■■■□□ 2.25
SNTA1-201ENST00000217381 SYAP1Q96A49 352 aaPredicted RBP29.11■■■□□ 2.25
SNTA1-201ENST00000217381 MSNP26038 577 aaKnown RBP29.11■■■□□ 2.25
SNTA1-201ENST00000217381 PDIA6Q15084 440 aa29.11■■■□□ 2.25
SNTA1-201ENST00000217381 GPATCH3Q96I76 525 aa29.11■■■□□ 2.25
SNTA1-201ENST00000217381 IFIT2P09913 472 aaKnown RBP29.1■■■□□ 2.25
SNTA1-201ENST00000217381 PTH1RQ03431 593 aa29.1■■■□□ 2.25
SNTA1-201ENST00000217381 TMEM87AQ8NBN3 555 aa29.1■■■□□ 2.25
SNTA1-201ENST00000217381 LINS1Q8NG48 757 aa29.1■■■□□ 2.25
SNTA1-201ENST00000217381 KAZALD1Q96I82 304 aa29.1■■■□□ 2.25
SNTA1-201ENST00000217381 UTYO14607 1347 aa29.1■■■□□ 2.25
SNTA1-201ENST00000217381 CASTP20810 708 aaKnown RBP29.1■■■□□ 2.25
SNTA1-201ENST00000217381 PROSER2Q86WR7 435 aaPredicted RBP29.1■■■□□ 2.25
SNTA1-201ENST00000217381 KDM6AO15550 1401 aaPredicted RBP29.1■■■□□ 2.25
SNTA1-201ENST00000217381 TCHHQ07283 1943 aa29.09■■■□□ 2.25
SNTA1-201ENST00000217381 GRM8O00222 908 aa29.09■■■□□ 2.25
SNTA1-201ENST00000217381 SUCLG2Q96I99 432 aa29.09■■■□□ 2.25
SNTA1-201ENST00000217381 LARP6Q9BRS8 491 aaKnown RBP29.09■■■□□ 2.25
SNTA1-201ENST00000217381 DDX21Q9NR30 783 aaKnown RBP eCLIP29.09■■■□□ 2.25
SNTA1-201ENST00000217381 NOL7Q9UMY1 257 aaKnown RBP29.09■■■□□ 2.25
SNTA1-201ENST00000217381 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.09■■■□□ 2.25
SNTA1-201ENST00000217381 ZSCAN22P10073 491 aaPredicted RBP29.08■■■□□ 2.25
SNTA1-201ENST00000217381 KCNB2Q92953 911 aa29.08■■■□□ 2.25
SNTA1-201ENST00000217381 CPA1P15085 419 aa29.08■■■□□ 2.25
SNTA1-201ENST00000217381 AACSQ86V21 672 aa29.08■■■□□ 2.25
SNTA1-201ENST00000217381 EVI5LQ96CN4 794 aa29.08■■■□□ 2.25
SNTA1-201ENST00000217381 ZC3H6P61129 1189 aaKnown RBP29.07■■■□□ 2.24
SNTA1-201ENST00000217381 TSPY26PQ9H489 355 aa29.07■■■□□ 2.24
SNTA1-201ENST00000217381 STX6O43752 255 aa29.06■■■□□ 2.24
SNTA1-201ENST00000217381 LARGE1O95461 756 aa29.06■■■□□ 2.24
SNTA1-201ENST00000217381 SYT1P21579 422 aa29.06■■■□□ 2.24
SNTA1-201ENST00000217381 COL18A1P39060 1754 aa29.06■■■□□ 2.24
SNTA1-201ENST00000217381 SASH1O94885 1247 aa29.05■■■□□ 2.24
SNTA1-201ENST00000217381 ADCK5Q3MIX3 580 aa29.05■■■□□ 2.24
SNTA1-201ENST00000217381 PRPF40BQ6NWY9 871 aaKnown RBP29.05■■■□□ 2.24
SNTA1-201ENST00000217381 BICC1Q9H694 974 aaKnown RBP29.05■■■□□ 2.24
SNTA1-201ENST00000217381 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.05■■■□□ 2.24
SNTA1-201ENST00000217381 DDX58O95786 925 aaKnown RBP29.05■■■□□ 2.24
SNTA1-201ENST00000217381 VPS53Q5VIR6 699 aa29.05■■■□□ 2.24
SNTA1-201ENST00000217381 RNF214Q8ND24 703 aa29.05■■■□□ 2.24
SNTA1-201ENST00000217381 TM6SF1Q9BZW5 370 aa29.05■■■□□ 2.24
SNTA1-201ENST00000217381 SMC3Q9UQE7 1217 aa29.05■■■□□ 2.24
SNTA1-201ENST00000217381 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.05■■■□□ 2.24
SNTA1-201ENST00000217381 PHF14O94880 888 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 C19orf44Q9H6X5 657 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 NPHP3Q7Z494 1330 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 SLC39A6Q13433 755 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 ZNF790Q6PG37 636 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 JAKMIP1Q96N16 626 aaKnown RBP29.04■■■□□ 2.24
SNTA1-201ENST00000217381 ZSWIM6Q9HCJ5 1215 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 CNPY2Q9Y2B0 182 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 MEGF6O75095 1541 aa29.04■■■□□ 2.24
SNTA1-201ENST00000217381 CCDC171Q6TFL3 1326 aa29.03■■■□□ 2.24
SNTA1-201ENST00000217381 NECTIN1Q15223 517 aa29.03■■■□□ 2.24
SNTA1-201ENST00000217381 IGKV5-2P06315 115 aa29.03■■■□□ 2.24
SNTA1-201ENST00000217381 EAF2Q96CJ1 260 aaPredicted RBP29.03■■■□□ 2.24
SNTA1-201ENST00000217381 PDRG1Q9NUG6 133 aa29.03■■■□□ 2.24
SNTA1-201ENST00000217381 OFD1O75665 1012 aa29.02■■■□□ 2.24
SNTA1-201ENST00000217381 AIMP1Q12904 312 aaKnown RBP29.02■■■□□ 2.24
SNTA1-201ENST00000217381 SLC52A2Q9HAB3 445 aa29.02■■■□□ 2.24
SNTA1-201ENST00000217381 F13A1P00488 732 aa29.02■■■□□ 2.24
SNTA1-201ENST00000217381 G3BP1Q13283 466 aaKnown RBP eCLIP29.01■■■□□ 2.23
SNTA1-201ENST00000217381 CYP46A1Q9Y6A2 500 aa29■■■□□ 2.23
SNTA1-201ENST00000217381 ABCC6O95255 1503 aa29■■■□□ 2.23
SNTA1-201ENST00000217381 ZNF500O60304 480 aaPredicted RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms